Nucleotide Global Alignment
Description
- Query:
- TRCN0000466788
- Subject:
- XM_006524096.3
- Aligned Length:
- 1923
- Identities:
- 855
- Gaps:
- 945
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGTAACAGCCACCCTCTTCGCCCCTTTACTGCAGTGGGGGAAATCGATCATGTGCACATTTTGTCTGAGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTGGTGCCTTGTTGATTGGTGAAGAATATGGTGATGTCACGTTTGTTGTGGAAAAGAAGCACTTTCCTGCCC 148
Query 1 --------------------ATGTGC---------AGAGCATTATTATATGGTGGAATGCGAGAGTCTCAGCCT 45
|.|||| .||||||||.|.|||||.||.|||||||||||.|||||.
Sbjct 149 ACAGGGTAATTTTAGCAGCGAGGTGCCAATATTTTCGAGCATTACTGTATGGCGGGATGCGAGAGTCGCAGCCC 222
Query 46 GAAGCAGAAATTCCTCTCCAAGACACCACTGCAGAAGCATTCACAATGCTACTCAAATATATCTACACTGGGCG 119
||||||||.||.|||||||||||||||||.||.||.||.|||||.|||||.||||.||||||||||||.|||||
Sbjct 223 GAAGCAGAGATCCCTCTCCAAGACACCACGGCCGAGGCTTTCACGATGCTCCTCAGATATATCTACACGGGGCG 296
Query 120 GGCAACGCTGACAGATGAGAAGGAGGAGGTGCTGCTGGACTTTTTGAGCCTGGCTCATAAATATGGATTTCCAG 193
|||.|||||.||.|||||||||||||||||||||||||||||..|||||||||||||.|||||.||||||||||
Sbjct 297 GGCGACGCTCACTGATGAGAAGGAGGAGGTGCTGCTGGACTTCCTGAGCCTGGCTCACAAATACGGATTTCCAG 370
Query 194 AGCTAGAGGATTCTACCTCTGAGTATCTCTGCACCATACTTAACATTCAGAATGTCTGCATGACTTTTGATGTT 267
||||.|||||.|||||.|||||||||||||||||||||||.|||||||||||||||||.|||||.|||||||||
Sbjct 371 AGCTGGAGGACTCTACTTCTGAGTATCTCTGCACCATACTGAACATTCAGAATGTCTGTATGACCTTTGATGTT 444
Query 268 GCCAGTCTCTACTCACTTCCCAAGTTAACTTGTATGTGCTGCATGTTTATGGATAGGAATGCTCAGGAAGTCCT 341
||||||||||||||.||||||||||||||||||||||||||||||||.|||||.||.|||||||||||.||.||
Sbjct 445 GCCAGTCTCTACTCGCTTCCCAAGTTAACTTGTATGTGCTGCATGTTCATGGACAGAAATGCTCAGGAGGTGCT 518
Query 342 CTCAAGTGAAGGTTTCCTCTCCCTTTCTAAGACAGCACTTTTAAACATCGTGTTAAGAGACTCATTTGCAGCTC 415
..|.||.||.||.|||||||||||.||.|||||||||||..|.||.|||||.||||||||.||.|||||.||||
Sbjct 519 GGCCAGCGACGGCTTCCTCTCCCTGTCCAAGACAGCACTCCTGAATATCGTCTTAAGAGATTCGTTTGCTGCTC 592
Query 416 CCGAAAAAGATATTTTCCTAGCCTTATTAAACTGGTGTAAGCACAATTCAAAGGAGAATCATGCTGAAATCATG 489
|.||.||||||||||||.|||||||.|||||||||||||||||||||.||||.|||||||||||||||||||||
Sbjct 593 CTGAGAAAGATATTTTCTTAGCCTTGTTAAACTGGTGTAAGCACAATGCAAAAGAGAATCATGCTGAAATCATG 666
Query 490 CAGGCTGTGCGTTTACCTCTCATGAGCCTCACAGAGCTTCTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCC 563
|||||||||||.||||||||.|||||||||||.|||||||||||.||.||||||||.||||||||..|||||||
Sbjct 667 CAGGCTGTGCGCTTACCTCTAATGAGCCTCACTGAGCTTCTGAACGTCGTGAGGCCATCAGGACTCTTGTCTCC 740
Query 564 TGATGCCATCCTGGATGCCATTAAAGTGCGATCTGAGAGCCGGGATATGGACCTCAATTATAGAGGCATGCTCA 637
.|||||.||.||.||||||||.||||||||.||.|||||||||||||||||||||||.||.|||||||||||||
Sbjct 741 GGATGCTATTCTTGATGCCATCAAAGTGCGGTCGGAGAGCCGGGATATGGACCTCAACTACAGAGGCATGCTCA 814
Query 638 TACCAGAAGAAAACATTGCAACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAGCTGAAATCAGCCTTATTA 711
||||.|||||||||||||||||||||||||||||.||.||.|||||.||.||.||||||||.||.|||||..|.
Sbjct 815 TACCTGAAGAAAACATTGCAACTATGAAGTATGGGGCTCAGGTTGTGAAAGGAGAGCTGAAGTCGGCCTTGCTG 888
Query 712 GATGGTGATACTCAAAATTATGATTTGGATCATGGATTTTCAAGGCACCCAATTGATGATGACTGCCGTTCCGG 785
||||||||.||||||||.|||||.|||||||||||||||||..|||||||.|||||||||||||||||.||.||
Sbjct 889 GATGGTGACACTCAAAACTATGACTTGGATCATGGATTTTCCCGGCACCCCATTGATGATGACTGCCGCTCTGG 962
Query 786 CATCGAGATTAAGCTAGGTCAGCCATCCATTATCAATCACATACGGATACTCTTGTGGGACCGAGATAGCCGGT 859
|||.|||||.|||||.||.|||||.||||||||.||.||||||||..|||||.||||||||||.||.|||||||
Sbjct 963 CATTGAGATCAAGCTTGGCCAGCCGTCCATTATAAACCACATACGTCTACTCCTGTGGGACCGTGACAGCCGGT 1036
Query 860 CTTACTCATACTTCATTGAAGTGTCAATGGATGAACTTGATTGGGTCAGAGTGATAGATCATTCACAATATCTG 933
||||.||.|||||.|||||||||||.|||||.||||||||||||.||||||||||.|||||.|||||.||.|||
Sbjct 1037 CTTATTCCTACTTTATTGAAGTGTCCATGGACGAACTTGATTGGATCAGAGTGATCGATCACTCACATTACCTG 1110
Query 934 TGTCGTTCTTGGCAGAAATTATATTTTCCAGCCCGTGTCTGCAGTGGAGATGGAGTCTCACTATGGTGCCCACT 1007
|||||.||||||||.||.||.|||||.||||||||||||||||||
Sbjct 1111 TGTCGGTCTTGGCAAAAGTTGTATTTCCCAGCCCGTGTCTGCAGT----------------------------- 1155
Query 1008 CTGGTCTCGAACTCCTGAGCTCAAGCAATCCTCCCTCCTTGGCCTTCCAAAGTGCAGGTATATTCGAATTGTTG 1081
Sbjct 1156 -------------------------------------------------------------------------- 1155
Query 1082 GGACTCACAACACAGTGAACAAGATTTTTCACATTGTGGCTTTTGAATGTATGTTTACAAACAAAACCTTCACT 1155
Sbjct 1156 -------------------------------------------------------------------------- 1155
Query 1156 CTTGAGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGTGATTGAAGGAGT 1229
Sbjct 1156 -------------------------------------------------------------------------- 1155
Query 1230 CAGTCGGAGCCGAAATGCCTTGCTGAATGGGGACACTAAGAATTATGACTGGGATTCTGGCTACACATGTCACC 1303
Sbjct 1156 -------------------------------------------------------------------------- 1155
Query 1304 AGCTAGGAAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTACATGATTGGGTCAATACGGTTACTACTTTGG 1377
Sbjct 1156 -------------------------------------------------------------------------- 1155
Query 1378 GATTGTGATGATCGAAGCTATAGCTACTACGTTGAGGTTTCTACCAACCAGCAACAGTGGACCATGGTTGCTGA 1451
Sbjct 1156 -------------------------------------------------------------------------- 1155
Query 1452 CAGAACTAAAGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATCCGTATCG 1525
Sbjct 1156 -------------------------------------------------------------------------- 1155
Query 1526 TTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGAGTGTCCAGAGCAGCAGAGCAGCCAG 1599
Sbjct 1156 -------------------------------------------------------------------------- 1155
Query 1600 AAGGAGGAAAATAGTGAGGAATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGCAGCTCGACTCCCATGCGCT 1673
Sbjct 1156 -------------------------------------------------------------------------- 1155
Query 1674 GCGGGCGCCTAGTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAGCACCAA 1746
Sbjct 1156 ------------------------------------------------------------------------- 1155
