Nucleotide Global Alignment

Description

Query:
TRCN0000466827
Subject:
XM_017319590.1
Aligned Length:
1507
Identities:
858
Gaps:
533

Alignment

Query    1  ATGGTCAGAAAGCCTGTTGTGTCCACCATCTCCAAAGGAGGTTACCTGCAGGGAAATGTTAACGGGAGGCTGCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TTCCCTGGGCAACAAGGAGCCACCTGGGCAGGAGAAAGTGCAGCTGAAGAGGAAAGTCACTTTACTGAGGGGAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCTCCATTATCATTGGCACCATCATTGGAGCAGGAATCTTCATCTCTCCTAAGGGCGTGCTCCAGAACACGGGC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGCGTGGGCATGTCTCTGACCATCTGGACGGTGTGTGGGGTCCTGTCACTATTTGGAGCTTTGTCTTATGCTGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  ATTGGGAACAACTATAAAGAAATCTGGAGGTCATTACACATATATTTTGGAAGTCTTTGGTCCATTACCAGCTT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TTGTACGAGTCTGGGTGGAACTCCTCATAATACGCCCTGCAGCTACTGCTGTGATATCCCTGGCATTTGGACGC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TACATTCTGGAACCATTTTTTATTCAATGTGAAATCCCTGAACTTGCGATCAAGCTCATTACAGCTGTGGGCAT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  AACTGTAGTGATGGTCCTAAATAGCATGAGTGTCAGCTGGAGCGCCCGGATCCAGATTTTCTTAACCTTTTGCA  592
                      ||||||||||||||||.|||||||||||||||.||||||||||||||||||.||||||||||||
Sbjct    1  ----------ATGGTCCTAAATAGCACGAGTGTCAGCTGGAGTGCCCGGATCCAGATTTTCCTAACCTTTTGCA  64

Query  593  AGCTCACAGCAATTCTGATAATTATAGTCCCTGGAGTTATGCAGCTAATTAAAGGTCAAACGCAGAACTTTAAA  666
            ||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||.||..||||||||
Sbjct   65  AGCTCACAGCAATTCTGATAATTATAGTCCCTGGAGTTATACAGCTAATTAAAGGGCAAACACATCACTTTAAA  138

Query  667  GACGCCTTTTCAGGAAGAGATTCAAGTATTACGCGGTTGCCACTGGCTTTTTATTATGGAATGTATGCATATGC  740
            ||.||.||||||||||||||..|||||.|.|.|.|||||||..||||||||||||||||.||||||||||||||
Sbjct  139  GATGCATTTTCAGGAAGAGACACAAGTCTAATGGGGTTGCCCTTGGCTTTTTATTATGGGATGTATGCATATGC  212

Query  741  TGGCTGGTTTTACCTCAACTTTGTTACTGAAGAAGTAGAAAACCCTGAAAAAACCATTCCCCTTGCAATATGTA  814
            ||||||||||||||||||||||.||||||||||||||||.|||||||||||||||||.|||||||||||.||.|
Sbjct  213  TGGCTGGTTTTACCTCAACTTTATTACTGAAGAAGTAGACAACCCTGAAAAAACCATCCCCCTTGCAATCTGCA  286

Query  815  TATCCATGGCCATTGTCACCATTGGCTATGTGCTGACAAATGTGGCCTACTTTACGACCATTAATGCTGAGGAG  888
            |.||||||||.||..||||..|.|||||.||.||||||||.||||||||.|||||.|||||.|.|||.||||||
Sbjct  287  TCTCCATGGCTATCATCACAGTGGGCTACGTACTGACAAACGTGGCCTATTTTACCACCATCAGTGCGGAGGAG  360

Query  889  CTGCTGCTTTCAAATGCAGTGGCAGTGACCTTTTCTGAGCGGCTACTGGGAAATTTCTCATTAGCAGTTCCGAT  962
            |||||||..||.|..||.|||||.||||||||.|||||||||||.||||||||.||||||||||||||.|||||
Sbjct  361  CTGCTGCAGTCCAGCGCCGTGGCGGTGACCTTCTCTGAGCGGCTGCTGGGAAAATTCTCATTAGCAGTCCCGAT  434

Query  963  CTTTGTTGCCCTCTCCTGCTTTGGCTCCATGAACGGTGGTGTGTTTGCTGTCTCCAGGTTATTCTATGTTGCGT  1036
            |||||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||.||.||.|
Sbjct  435  CTTTGTTGCCCTCTCCTGCTTCGGCTCCATGAACGGTGGTGTGTTCGCTGTCTCCAGGTTATTCTACGTCGCAT  508

Query 1037  CTCGAGAGGGTCACCTTCCAGAAATCCTCTCCATGATTCATGTCCGCAAGCACACTCCTCTACCAGCTGTTATT  1110
            |||||||.||.||||||||.|||||||||||.|||||||||||||.|||||||||||||||.||||||||||||
Sbjct  509  CTCGAGAAGGGCACCTTCCGGAAATCCTCTCTATGATTCATGTCCACAAGCACACTCCTCTGCCAGCTGTTATT  582

Query 1111  GTTTTGCACCCTTTGACAATGATAATGCTCTTCTCTGGAGACCTCGACAGTCTTTTGAATTTCCTCAGTTTTGC  1184
            ||||||||.|||.||||.|||.|.|||||||||||.|||||||||.|.||||||.|.|||||||||||||||||
Sbjct  583  GTTTTGCATCCTCTGACGATGGTGATGCTCTTCTCCGGAGACCTCTATAGTCTTCTAAATTTCCTCAGTTTTGC  656

Query 1185  CAGGTGGCTTTTTATTGGGCTGGCAGTTGCTGGGCTGATTTATCTTCGATACAAATGCCCAGATATGCATCGTC  1258
            |||||||||||||||.|||||||||||.||.||.|||||||||||||||||||||.||||||||||||||||||
Sbjct  657  CAGGTGGCTTTTTATGGGGCTGGCAGTCGCAGGACTGATTTATCTTCGATACAAACGCCCAGATATGCATCGTC  730

Query 1259  CTTTCAAGGTGCCACTGTTCATCCCAGCTTTGTTTTCCTTCACATGCCTCTTCATGGTTGCCCTTTCCCTCTAT  1332
            |||||||||||||.||.||||||||.||..|.|||||||||||.||||||||||||||||.|||.||.||.||.
Sbjct  731  CTTTCAAGGTGCCTCTCTTCATCCCGGCACTATTTTCCTTCACCTGCCTCTTCATGGTTGTCCTCTCTCTTTAC  804

Query 1333  TCGGACCCATTTAGTACAGGGATTGGCTTCGTCATCACTCTGACTGGAGTCCCTGCGTATTATCTCTTTATTAT  1406
            |||||||||||.||.||.|||.|.||.||..|.|||||..|||||||.||||||||.|||||||||||.|||.|
Sbjct  805  TCGGACCCATTCAGCACCGGGGTCGGTTTTCTTATCACCTTGACTGGGGTCCCTGCATATTATCTCTTCATTGT  878

Query 1407  ATGGGACAAGAAACCCAGGTGGTTTAGAATAATGTCAGAGAAAATAACCAGAACATTACAAATAATACTGGAAG  1480
            |||||||||||||||||.||||||.|||..|.|.|||||.|.||||||||||||||||||.||.|||||.||||
Sbjct  879  ATGGGACAAGAAACCCAAGTGGTTCAGACGATTATCAGACAGAATAACCAGAACATTACAGATTATACTAGAAG  952

Query 1481  TTGTACCAGAAGA----AGATAAGTTA  1503
            |||||||||||||    |.|.|| |||
Sbjct  953  TTGTACCAGAAGACTCTAAAGAA-TTA  978