Nucleotide Global Alignment

Description

Query:
TRCN0000466890
Subject:
XM_011542572.1
Aligned Length:
1267
Identities:
444
Gaps:
803

Alignment

Query    1  ATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGGATTGTGGAGCTTCTCTTGACCTCTGATGGTGAGAAACA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGGATTGTGGAGCTTCTCTTGACCTCTGATGGTGAGAAACA  74

Query   75  TGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGCCATCAATTTGCAAAAACTTCACCAGGATACTTTCAATC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGCCATCAATTTGCAAAAACTTCACCAGGATACTTTCAATC  148

Query  149  AGCTTCATAAAGTCCAGAGAGATAAGCCCCTTCTGATTATGGAATACTGGGTCGGCTGGTTCGACAGATGGGGA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGCTTCATAAAGTCCAGAGAGATAAGCCCCTTCTGATTATGGAATACTGGGTCGGCTGGTTCGACAGATGGGGA  222

Query  223  GATAAGCACCATGTTAAAGATGCAAAGGAGGTTGAACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GATAAGCACCATGTTAAAGATGCAAAGGAGGTTGAACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTT  296

Query  297  CAATGTATATATGTTCCATGGTGGAACCAACTTTGGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAATGTATATATGTTCCATGGTGGAACCAACTTTGGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGG  370

Query  371  GCATTGTCACCAGCTATGGCAAGTGTCGCTGGTGTAGTAGCCTCTCCAGCATGGGCGGTGCTGGGGCTTTACAG  444
            ||||||||||||||||||.|.|       ||.||.|||  .|||.|       ||.|  |||||.| .|||||.
Sbjct  371  GCATTGTCACCAGCTATGACTA-------TGATGCAGT--GCTCAC-------GGAG--GCTGGAG-ATTACAC  425

Query  445  AG----------GAGGCTCCGGAAGC-CTGT---TCTG-----GCA---CCACT-----GGGTTCT--------  483
            ||          ||.|||.|..||.| ||.|   ||||     |||   ||.||     |.||.|.        
Sbjct  426  AGAAAAATATCTGAAGCTTCAAAAACTCTTTCAATCTGTCTCAGCAACTCCCCTGCCCCGAGTACCCAAACTTC  499

Query  484  --------------------------------------------------------------------------  483
                                                                                      
Sbjct  500  CTCCCAAGGCTGTGTATCCCCCCGTGAGACCGTCGCTGTACCTCCCGCTGTGGGACGCCCTATCCTACTTAAAT  573

Query  484  --------------------------------------------------------------------------  483
                                                                                      
Sbjct  574  GAGCCAGTCAGGTCGCGTCAGCCCGTCAACATGGAGAACCTTCCCATAAACAATGGGAGCGGCCAGTCCTACGG  647

Query  484  --------------------------------------------------------------------------  483
                                                                                      
Sbjct  648  GCTTGTCCTGTATGAGAAGTCCATCTGCTCCGGAGGCCGCCTCCGTGCCCACGCTCATGACGTGGCACAGGTGT  721

Query  484  --------------------------------------------------------------------------  483
                                                                                      
Sbjct  722  TTTTGGATGAGACAATGATAGGGATTCTGAATGAGAATAATAAGGACCTGCACATTCCTGAACTCAGGGACTGC  795

Query  484  --------------------------------------------------------------------------  483
                                                                                      
Sbjct  796  CGATACCTGAGGATCCTGGTGGAGAATCAAGGACGAGTCAATTTTTCATGGCAAATACAGAATGAGCAGAAAGG  869

Query  484  --------------------------------------------------------------------------  483
                                                                                      
Sbjct  870  AATAACTGGATCTGTCAGCATCAATAACTCTTCCCTGGAGGGCTTTACCATCTATTCCCTGGAGATGAAAATGA  943

Query  484  --------------------------------------------------------------------------  483
                                                                                      
Sbjct  944  GCTTCTTTGAGAGGCTCCGCTCTGCCACCTGGAAGCCTGTCCCAGACAGCCACCAGGGCCCGGCCTTCTACTGT  1017

Query  484  --------------------------------------------------------------------------  483
                                                                                      
Sbjct 1018  GGGACCTTGAAGGCTGGCCCTTCTCCCAAGGACACCTTCCTGAGCCTGCTGAACTGGAATTATGGATTTGTGTT  1091

Query  484  --------------------------------------------------------------------------  483
                                                                                      
Sbjct 1092  CATCAATGGACGTAACCTTGGGCGATATTGGAATATTGGGCCTCAGAAAACACTGTACCTTCCTGGAGTTTGGC  1165

Query  484  --------------------------------------------------------------------------  483
                                                                                      
Sbjct 1166  TTCATCCAGAAGACAATGAGGTCATCTTGTTTGAGAAGATGATGAGTGGCTCAGATATCAAATCTACAGACAAG  1239

Query  484  ---------  483
                     
Sbjct 1240  CCCACGCTG  1248

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