Nucleotide Global Alignment
Description
- Query:
- TRCN0000466893
- Subject:
- XR_001737254.1
- Aligned Length:
- 6171
- Identities:
- 655
- Gaps:
- 5495
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCTGGACGTGGTGAGCCGGACCGGGGGCAGGTGGCAAACTTCACGGCTGGGGGTCGGGGCTCCTGGGCTTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCCACATCCTTCCAGCCCTCTCCTCCGGCCGCTGGACTGTCCCGGCTCCTGCGCCCTCCTTGTGGCGCGATAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGTGGGACGAGGCTCCGGGCCGGGACTGGGTGGCCCTCGGGAATCCGCAGCCAGTGGCCCCCCACCTCAAAGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACCAGCGCGGCCTCTCGAGCTGGCCTGGCCAGGAGTTGCCCTGCCCCGGCCGACCGGCCCCTTGGCATCTGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTTCGTTTTTCCCGGGCCGGCCGGGCGAGGGGCCCTCGCGGCGCTGGCCCCAGCAGCTGTCCTATCATTATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTCCAAACAGGCGGCCCGCGCCGGGCTGAGTCACCAGGAGGGAGCTGTGGCCGAGGACGCCGAGGCCTGGAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGTGGTAGCCCCGAGCTGGGACGCTCCTCCCTCCACAATCTCCCCAGGTCTGCAGGGACCGAGGGCCTACACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCTCCTCCCACGCCGTGCTTAGGAACCCTTGCTGGCCTCAGAACACCAGCGCCCTCCCTCCGGTGCAGCCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTGGCCGGGGGCCCCTCCTCCACAGCCATGGTCTGGAAGAAACTGGGCTCCCGCAACTTCTCCAGCTGCCCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTGGCTCCATCCAGTGGATATGGGATGTGTTGGGTGAATGTGCCCAGGACGGCTGGGACGAGGCCAGCGTGGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGGGCTTGATCTCCATTCTCTGCTTTGCTGCATCTACCTTCCCCCAGTTCATCAAAGCCTACAAGACGGGCAA 814
Query 1 -ATGGACCAGGCGCTGTCCCTGTGGTTCCTCCTGGGCTGGATTGGCGGAGACTCCTGCAACCTCATCGGCTCCT 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CATGGACCAGGCGCTGTCCCTGTGGTTCCTCCTGGGCTGGATTGGCGGAGACTCCTGCAACCTCATCGGCTCCT 888
Query 74 TCCTTGCTGACCAGCTGCCCCTGCAGACCTACACGGCTGTGTATTATGTCTTGGCAGACCTGGTGATGCTGACG 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCCTTGCTGACCAGCTGCCCCTGCAGACCTACACGGCTGTGTATTATGTCTTGGCAGACCTGGTGATGCTGACG 962
Query 148 CTGTACTTTTACTACAAGTTCAGGACGCGCCCCTCTCTGTTGTCTGCCCCCATCAACTCCGTGCTGTTGTTCCT 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGTACTTTTACTACAAGTTCAGGACGCGCCCCTCTCTGTTGTCTGCCCCCATCAACTCCGTGCTGTTGTTCCT 1036
Query 222 CATGGGGATGGCGTGCGCCACACCGCTGCTGAGTGCTGCTGGGCCCGTGGCTGCCCCTAGGGAAGCCTTCCGGG 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CATGGGGATGGCGTGCGCCACACCGCTGCTGAGTGCTGCTGGGCCCGTGGCTGCCCCTAGGGAAGCCTTCCGGG 1110
Query 296 GGCGGGCGCTCCTGTCCGTGGAGTCGGGCAGCAAGCCCTTCACCCGGCAGGAAGTCATTGGCTTCGTCATCGGC 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGCGGGCGCTCCTGTCCGTGGAGTCGGGCAGCAAGCCCTTCACCCGGCAGGAAGTCATTGGCTTCGTCATCGGC 1184
Query 370 TCCATCTCCAGCGTGTTGTACCTGCTTTCCCGGCTGCCTCAGATCCGCACCAACT----------TCCT----- 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1185 TCCATCTCCAGCGTGTTGTACCTGCTTTCCCGGCTGCCTCAGATCCGCACCAACTCGTGCACACCTCCTGTGTG 1258
Query 429 -------------------------CCGGAAGT------------CCA----------------------CCCA 443
|||..||| ||| ||||
Sbjct 1259 CCAGGCACCCAGCTGGACCCTGGAGCCGTGAGTGAGCAAGAACAGCCATGAGTGCCCCAGAAGCTTACAGCCCA 1332
Query 444 GGGG----------------------ATC--------------------------------------------- 450
|.|| |||
Sbjct 1333 GCGGGGCGCAGAGAGGACACAACGCTATCATCAAAGAATTACTTCATTGCAGTGGCACCAAGTGCTGCAGAGAA 1406
Query 451 -----------------------------TCCT----------------------------ACTCTC------- 460
|||| |.||||
Sbjct 1407 AAACAACAAGAGCGTCTAGCCAGGGACCGTCCTGGTTAGAGGGGCAGCAAAGGCCCCTATAAGTCTCATTGAAC 1480
Query 461 -----------------------------------------------TGTTC----------------GCGCTG 471
||||| |.||||
Sbjct 1481 CTGTGACTTGACAGAGTAGGAGAAGTCAGGCGAAGGCAGGAGAGGAATGTTCTAGGCTGTGCAGACGAGAGCTG 1554
Query 472 GTGATGCTGGGGA-ACAC------------------------------------------------------GC 490
|.| || |||.|| |||| ||
Sbjct 1555 GAG-TG-TGGAGAGACACATGACTTGGTCAGACAAACCTGGGTTCAAATCCTGGCTCCTCCCCTGCTTCCTAGC 1626
Query 491 TGTATG-GGCTGAGC-----------------GTGCTGC-------TCA------------------------- 514
|||.|| .||.|.|| ||||||| |||
Sbjct 1627 TGTGTGACGCAGGGCACACAGTCAACCTCTCTGTGCTGCCGTGTCTTCACCTCAGTTAACAGCCACTGTCTCGT 1700
Query 515 -----------------------------AAA-------------ACCCCG-----AG-GAGGGC--------- 531
||| |||||| || ||||||
Sbjct 1701 CAGGATGTTGTGTAAGATGAGGTATCTGGAAACACTCCCCACAGGACCCCGTTTTCAGTGAGGGCTCAGAAAGT 1774
Query 532 ------------------CAGAGCG------------------------------------------------- 538
.||||||
Sbjct 1775 GTTTGCTGAATGGCTGTAAAGAGCGTTACCTGGGTCTCATTTCGGAGCAAGTAAACATGGCCTTTGTTTTAATA 1848
Query 539 -----------------------AGGG--------------------------------------CAGCTACCT 551
|||| ||||.||||
Sbjct 1849 TTTGTTAAGTCCCTGCCGGGCGCAGGGAGGGGTGAAAGTTTAGGCTCTTGTGCCCCAAAACGGCCCAGCCACCT 1922
Query 552 G-----CTGCA-----CCAC------------------------------------------CTGCCC------ 567
| ||.|| |||| ||||||
Sbjct 1923 GGAAGCCTCCAGGACGCCACAGCTGAGAGCAAGCGAAGATCCTGGGCCAGGGTCAAGGGAGGCTGCCCACGGGA 1996
Query 568 --------------------------------------------TGGCTTGTGG-------------------- 577
.||||||.||
Sbjct 1997 AGGAGAAGTCAGTGCTAGGCTTGGAGACAGATGGAGCTTGGCTAGGGCTTGAGGAGCCGGGCAGAAGTTCTGAG 2070
Query 578 ------------------------------------------------------GCAGCCTGGGCGTG------ 591
|||||.||||.|||
Sbjct 2071 TGGAGGGCACAGCTAAGGTAGCGGCTGGGAGGTTATGGCTGGCCCTTCCCACCTGCAGCGTGGGGGTGGGAGGG 2144
Query 592 -------------------------------------------------------------CTGCT--GCT--- 599
||||| |||
Sbjct 2145 AGGGGAGAGGGAGGCAGCTCCCAGGAGTCGAAGGCCCCCAGGGGCAGGTCCAACCCAGTCTCTGCTCAGCTTGG 2218
Query 600 ---------CGACACCATC--ATCTCCATCCAGTTCCTGGTGTACAGGCGCAGCACCGCCGCCTCGGAGCTTGA 662
||.||||..| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2219 CCTTAACGGCGGCACCCCCAGATCTCCATCCAGTTCCTGGTGTACAGGCGCAGCACCGCCGCCTCGGAGCTTGA 2292
Query 663 GCCCCTCCTCCCCAGC---------------------------------------------------------- 678
||||||||||||||||
Sbjct 2293 GCCCCTCCTCCCCAGCTGACCAGAACCAGGCTGAGCGCAGGAGGACAGGCACCACCGGATGCCACACCAGGCAG 2366
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2367 GAGGAGGTGTGGACAGTGATGGTACGGCGGCCCTGCATCAGCCTGCGGGTGGCCTCTGGATCCTCCGTGGACCG 2440
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2441 AACCGTCCCCCCAGGAACACACCTTCAGGGGCCACAGCCACAGCCTGCTGGACTCAGGACTGTCCTGTCAACTC 2514
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2515 CAGACAACTGAATAAACAGGCCGGGTACAGTGGCTCGCACCTGTAATCCTAGCACTTTGGGAGGCCGAAGCGGG 2588
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2589 TGGACCACTTGACGTCCGTAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAA 2662
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2663 AAATTAGCCAGGTGTGGTGGCACACATCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGTTTGAA 2736
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2737 CCTGGGAGACAGAGGTTGCGGTGAACCGAGATCGTGCCACTGTACTCCAGCCTGGGTGACAGAGTGAGACTCCG 2810
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2811 TCTCAAAAAAATAAAAAAGATAACCGAGGAAACGGTACCTCCCCATGAGACCTGCTTCTGTTGCTCCTTCCCCA 2884
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2885 AGGTGCTGAGGGATCGGGGCTGCTTTGGGGACCAGCGGTGGATGTGGATGGGGATTCAGGACGAGCTGAGCAGA 2958
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2959 GGGGACCGCATCTGCCTGCAGCCCTGGCCCAGCCTCCTGGGGCCTCTGGTTTCTTTAGCCTGCTTCTCCGGGCC 3032
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3033 CTTTCCTGACAGGCCCCACACCTTACTGTGGGGACATAGCAGGGAGAGTGACTCCCCACGGGGAGCCTGCCCCT 3106
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3107 CGGTGTTCAGGAAGAAGCAGAATGGTTAAGGTTCTGTTGGATCTGGGTTCTCCATCGCAGTTCCTCAGTGCCTA 3180
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3181 GCTTATCTCATCTGTGAAATGGACAGTACTGTCATTTCCTGTGTCCTTTCAAGGATTACATAAGATGCTGACAT 3254
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3255 TATGGAGTTTAGCCCCAGATCTGGCGCATAGTAAGGGCTCAATAAAGGTTAGTTTTGAGGACTTTTAGTTGGAG 3328
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3329 AAGAGGAGCAACCAGATCTTGGAGATCAGGGAGAGCCTCCTGGAGGAGGTGATAGGTCAGAAGGATGAGCGGGA 3402
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3403 GATATCACAGGGAAAGAGGGAGGATTGAAGGCAGGAGGAAGAAGTGGCGGGTACAGGAGCAAGGTGGGAGAGTG 3476
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3477 GAGAGGAGGGCAGAGCTGAGCTCCGAGTGCTTCCTGGACCCGCAAACTCAGTGTTGTCCAGACCCTGTTTTATT 3550
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3551 TTTAAAATTTTTTAGCCCAGGCCGGAGTACAGTGGTGCGATCATAGCTCACTGCAGCCTCGAACTCCTAGCTTC 3624
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3625 CAGGGATCCTCCCACTCAGCCTCCCGAGGAGCTGGGACTACAGATGAGCACCACCATGCCTGGCTCCAGACCCT 3698
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3699 GTTCTGATTCCACTTTCCTGGGGGTCATGACCCTCAGGTGCCTGGAGCACAGAGACGCCAGCTCCCCACCTTGT 3772
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3773 TGGCCTGATCTCACCCCACACACCCAACCCTAGCTGTGGAAAACCAGAACCAGGGACTTGGGGTATCTGGTGGG 3846
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3847 GTAGTCTTGGGGAGAGACGCTGCGTCCCAGAGTGGGCCTTGCCTTTAGGATCTCCCTTCCCAGCCCCGGAGAAG 3920
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3921 GGAAACGGTGCCATGGCCATTCTGGTGCCGCAGATCCTTTGTGAGCACAGCCCTCCACTCAGCCTTTGCTGTGT 3994
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3995 CAGACACCGGGGCTGTGGTGAACCAGCTCCAAGGCCCTGCCTTCCAGGAGAGGAGATGGTTACCATGACCAGAA 4068
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4069 GGTAGAAATGTCAGGAAATGAGCAGATGAGACCAGCCCCAGGAGGGTCAATCAGGGAGGACTTCTCAGAGGAGT 4142
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4143 GGCCTTTGAGCTGGATCTTGAAGGCAGAGGGGAGGGCAGTTCAGGAAAAGGGAGGGGCAGGTACAGAGGCCTGG 4216
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4217 AGGTGGGTGTCTCGGGTGCTTCCAAGGTGGGGCTGCTTACAAGGAGCCTTGAAAGCCACACCAATGCCAAGGAC 4290
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4291 AAGGTCCTGGGGCACACCCAGCAGCAGCCCAGCAGCAGGTGATGGGGTTTGGTCGGGTGAAGAGCCTTTTGCTA 4364
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4365 GAGAGAGGAGGCAAGGCACACCTCTGAGACCCAGGTGGGCAGAGAGGGCCAGTCTCCCCTGCCCTGTCCCCCTA 4438
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4439 GGGGACACCCACGGAGCCCAGGATGCCATCTGGCATGCAGCTGTTAGTTGCACACTTGCCATGTGCGGGCTGCG 4512
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4513 CCGCCTGCCATCAGTGCACGAGATCTCCCCGTCTTCACAGCCAGCTCTGAGATGGGGGAGTTTTTATTTTTTTT 4586
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4587 TGACACAGAGTCTTGCTCTGCCGCCCAAGCTGGAGTGCAATGGTGCGATCTCAGCTCACTGCAACCTCCGCCTC 4660
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4661 CCGGGTTCGAGCGATTCTCCTGCCTCAACCTCCCAAGTAGCTGGGATTACAGGCGCCTGCCGCCACGCTCAGCT 4734
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4735 AATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTTACCTCAGGTG 4808
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4809 ATCTGCTTGCCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGCCACCGCGCCCGGCCAAGATGGGAGTATTT 4882
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4883 TTATGGCCATTTTACAGATGGGAGAACAGTCTCAGCACAATTGAGCAGCTTGCCCAGCTAGGAGCAGCAGCAAC 4956
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4957 ACGAGACCCTCCAGCTTTGGGAGCCACCCCACACCTGGCCAACGCTGGCGGCCCGTGTCCCCTTCCTCCATCCT 5030
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5031 TGCTGGGGGCCCATGGCTTGTGGCAGTTCAGCTTCACCCTCAGGAGTGGCCCGAACCCTGCTGGACCCAGGCTC 5104
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5105 CCTTCTCACCATCCTGAATAGCGACTTTGCTGAGCCTCTGGCCCTGCCGAGATTTCAGGATAAGTTACCCCCAG 5178
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5179 GCCCGAAGCCCCAGCTTGCCCTGGCCTGTGCCTGCCTCAGGTGCCAGCTAGATGTCTCGCTCCACCTGGGTCTG 5252
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5253 GGACCTGGCTCCACACCAGTTACCTGGGACCAGTAGGTGCCCTTCCAGCCTGAAGATCTGGGGGCACAGTATAG 5326
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5327 CCACATGAGCCCCAAGTGTGGTCCTGAACTGGGGCCGGGTGGGGAAGAGTGAGATGGGATAACATAGCCCCTGC 5400
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5401 TTGGAGGCCCTTCTCTGATGGGGTGACATAATCCCTTCCTCCTGGGAAACACCAGCTTTTGGGGTGATAGCACT 5474
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5475 TTCAGGCAGGAGCTATGGTTCCTTCCTCAGGAGGCCTCCAATCTGATGGGGAAGACATGGCCCCTCCCCCTGGG 5548
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5549 GAGTGCCCTGTGTGATGGAGGCGATACAGCCCCTACCTTCAGAGAGCACCTGGCCTGCAGCTCATCCAAACCTG 5622
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5623 AGTCTCCTCTCCCTTGGAGGCCTCATTCCAGCGCCCCAAGGAGGATTCAAACTGTTGGGGCTGGAAGAACTTGG 5696
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5697 TGGCCTGGGTCCCTGGAGCCCTGTTGAAGGAGCTGGTGACATTCTGATGCTGGAGGCAGGTGACGGGGAGCACA 5770
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5771 GACTTTGTGTCCTGCACACTGAGCTCCAAGTGTGCCCCAGCCACTGAGCCTTGTGACTTGAGCAGATGTCCGAA 5844
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5845 GCCGTTTCTTCATCCCATGAGACCAACAACACTGTCTGCCTCAGAACATAGCCGTGATCAAGATGAGCACGGAG 5918
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5919 GCTCGTGTCCCAGCACCTGGCACACAGTAAGTGCCTGGTAAATAAACAATGGCTATATTTGCTTGTCATCAGGG 5992
Query 679 -------------------------------------------------------------------------- 678
Sbjct 5993 GGCTTACCAATGCCTGGAACCTCCCCCAGGTTCCTCACAAAGAGAAGGGCCAAGGCCGGGTGCAGTGGTTCACG 6066
Query 679 -------------------------------------------------------------------------- 678
Sbjct 6067 CCTGTATTCCCAGCATTTTGGGAGGCTGAGGCAGGAGGATCACTTGAGCCAAGGAGTTCAAGACCAACTTGGGC 6140
Query 679 ----------------------------- 678
Sbjct 6141 AACATAGCAAGACCCCATCTCTACAAAAA 6169
