Nucleotide Global Alignment

Description

Query:
TRCN0000466913
Subject:
NM_001308117.1
Aligned Length:
1352
Identities:
1088
Gaps:
244

Alignment

Query    1  ATG----CTGGCGTCTCAAGGAGTTCTCCTGCA-----TCCTTATGGCGTGCCTATGATTGTACCGGCAGC--T  63
            |||    ||||    ||||  ||..|||.||||     ..||||..|| |.||| ||||.|.||  .||||  |
Sbjct    1  ATGGAAACTGG----TCAA--AGAACTCATGCAAGTGGAACTTACAGC-TTCCT-TGATCGGAC--TCAGCATT  64

Query   64  C---------------CT----TACCTTCCTG---------GACTGA-----TTCA------------------  86
            |               ||    |||||.|.||         |||.||     ||||                  
Sbjct   65  CAGATATCAAAGCAGACTGCAATACCTGCGTGGAAATAGAAGACAGAAAGGTTTCAAGACAACAGATGAATTGT  138

Query   87  -----------------GGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGC  143
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  139  GAAAGAGAGCAGCTAAGGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGC  212

Query  144  CCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACA  217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  213  CCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACA  286

Query  218  CAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGCCCG  291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  287  CAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGCCCG  360

Query  292  GCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCAGCC  365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  GCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCAGCC  434

Query  366  CCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCTTCA  439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  435  CCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCTTCA  508

Query  440  GGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAAT  513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  509  GGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAAT  582

Query  514  GAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAAATT  587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  583  GAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAAATT  656

Query  588  ACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAAAGA  661
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  657  ACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAAAGA  730

Query  662  CCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTATGCA  735
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  731  CCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTATGCA  804

Query  736  GGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTATATAC  809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  805  GGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTATATAC  878

Query  810  TTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAGGCC  883
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  879  TTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAGGCC  952

Query  884  GCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGAGTAGTG  957
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.
Sbjct  953  GCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGTGTTGTT  1026

Query  958  TATCAAGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTATGCTGCATACCGCTACGCC  1020
            ||.||.||   ||   |.|||||           |||||        |||||||||||||||||||||||||||
Sbjct 1027  TACCAGGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTATGCTGCATACCGCTACGCC  1086

Query 1021  CAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAAATTTC  1094
            |||||||||||||||||||||||||||||||||||                                       
Sbjct 1087  CAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGA---------------------------------------  1121

Query 1095  TTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCCCAC  1168
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1122  --------------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCCCAC  1181

Query 1169  CTACGGCGTTGGTGCCA---------------------------------------------------------  1185
            |||||||||||||||||                                                         
Sbjct 1182  CTACGGCGTTGGTGCCATGCCCCAAGGTTCCAGCCCCAGCACAGACTTCAGAGGAGCTAAGCTGCACACTTCCA  1255

Query 1186  --------------------  1185
                                
Sbjct 1256  GGCCTCTGCTGTCAGGCAGC  1275

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