Nucleotide Global Alignment

Description

• Query: TRCN0000466913
• Subject: XM_017023334.1
• Aligned Length: 1341
• Identities: 1003
• Gaps: 312

Alignment

Query    1  ---ATGCTG--GCGTCTCAAGGAGTTCTCCTGCATCCTTATGGCG-TGCCTA---TG---AT-TGTACCGGCAG  61
               ||||.|  .|.|||.|.||.|..|.|||||      .||||| |.||.|   ||   || |||.||  |||
Sbjct    1  ATGATGCAGCATCCTCTGACGGGGGCCACCTGC------GTGGCGCTCCCCAACGTGGGCATGTGTCCC--CAG  66

Query   62  CT--------CCTT-ACCTTCCTGGACTGA-TTCAGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGC  125
            ||        |||| ||.||..||.|||.| ..|||||||||||||||||||||||||||||||||||||||||
Sbjct   67  CTTTCGTGTGCCTTGACTTTTATGTACTTACAGCAGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGC  140

Query  126  TCAGCCTTACGCTTCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCC  199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  141  TCAGCCTTACGCTTCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCC  214

Query  200  ACCCCGCGCCAGAGTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACG  273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  215  ACCCCGCGCCAGAGTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACG  288

Query  274  CACTCCGAGCAGAGCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGC  347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  289  CACTCCGAGCAGAGCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGC  362

Query  348  ACCGACGGATGGCCAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATG  421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  363  ACCGACGGATGGCCAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATG  436

Query  422  TCTCCAATATCCCCTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGAT  495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  437  TCTCCAATATCCCCTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGAT  510

Query  496  GTTGAAATTATTTTTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGA  569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  511  GTTGAAATTATTTTTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGA  584

Query  570  CAGGGCGAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTG  643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  585  CAGGGCGAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTG  658

Query  644  TAATGACAAATAAAAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTAC  717
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  659  TAATGACAAATAAAAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTAC  732

Query  718  AGTCCCGAATTCTATGCAGGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCC  791
            |||||||||||||||||||                                                       
Sbjct  733  AGTCCCGAATTCTATGCAG-------------------------------------------------------  751

Query  792  CAGTTCACTTGTATATACTTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAG  865
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  752  --------------------------TGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAG  799

Query  866  GGGCGCACCTGCGAGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCG  939
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  800  GGGCGCACCTGCGAGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCG  873

Query  940  GCCTACGGCGGAGTAGTGTATCAAGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTAT  1002
            |||||||||||.||.||.||.||.||   ||   |.|||||           |||||        |||||||||
Sbjct  874  GCCTACGGCGGTGTTGTTTACCAGGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTAT  933

Query 1003  GCTGCATACCGCTACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGT  1076
            |||||||||||||||||||||||||||||||||||||||||||||||||||||                     
Sbjct  934  GCTGCATACCGCTACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGA---------------------  986

Query 1077  TGCAGCAGATGAAATTTCTTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGC  1150
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct  987  --------------------------------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGC  1028

Query 1151  ACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCA---------------------------------------  1185
            |||||||||||||||||||||||||||||||||||                                       
Sbjct 1029  ACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCATGAATGCTTTTGCACCTTTGACTGATGCCAAGACTAGGA  1102

Query 1186  --------------------------------------------------------------------------  1185
                                                                                      
Sbjct 1103  GCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTT  1176

Query 1186  ---------  1185
                     
Sbjct 1177  GCTCCATAC  1185