Nucleotide Global Alignment
Description
- Query:
- TRCN0000466913
- Subject:
- XM_017317004.1
- Aligned Length:
- 1273
- Identities:
- 905
- Gaps:
- 278
Alignment
Query 1 ATGCTGGCGTCTCAAGGAGTTCTCCTGCATCCTTATGGCGTGCCTATGATTGTACCGGCAGCTCCTTACCTTCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGGACTGATTCAGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGCCCAGT 148
||||||||||||||.||.||.||.||||
Sbjct 1 ----------------------------------------------ATGGCTCAGCCTTATGCCTCAGCGCAGT 28
Query 149 TTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACACAGGC 222
|.||.||.||.|||||.||.|||||.||.||||||||||||||||||||.||.|||||||||||||||||.|||
Sbjct 29 TCGCACCACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTCATCCTCATCCCGCGCCAGAGTACACCGGC 102
Query 223 CAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGCCCGGCGGA 296
||||||||.||.||.||.|||||||||||||||||.|||||..|.|||||||||||.|||||||| .||.||
Sbjct 103 CAGACCACTGTCCCTGACCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAG---TGCTGA 173
Query 297 CACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCAGCCCCAGA 370
|||.||.||.|||||||||||.|||||||||||||||||||||||.|||||.|||||.||.|||||||||||||
Sbjct 174 CACCAGTGCGCAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCAGCCCCGACCGACGGCCAGCCCCAGA 247
Query 371 CACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCTTCAGGTTC 444
|||||||||||||||||||.||||.||||||.||||||||||||||||||||.|||||.|||||.|||.|||||
Sbjct 248 CACAACCTTCTGAAAACACAGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGTCCAACATCCCTTTCCGGTTC 321
Query 445 CGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAATGAGCG 518
||||||||.||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 322 CGGGATCCAGACCTCCGACAAATGTTTGGTCAATTTGGTAAAATATTAGATGTTGAAATTATTTTTAATGAGCG 395
Query 519 AGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAAATTACACG 592
||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||
Sbjct 396 AGGCTCCAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCGGATGCGGACAGGGCGAGGGAGAAATTGCACG 469
Query 593 GCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAAAGACCGTC 666
|.|||||||||||||||||||||||||||||.||||||||.||||||||.||.|||||||||||.|||||.|||
Sbjct 470 GTACCGTGGTAGAGGGCCGTAAAATCGAGGTTAATAATGCGACAGCACGCGTGATGACAAATAAGAAGACTGTC 543
Query 667 AACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTATGCAGGCAC 740
|||||.||.||.||||||||||||||.||||||||||||||.||.||||||||.|||||.||||||||||||||
Sbjct 544 AACCCCTACACCAATGGCTGGAAATTAAATCCAGTTGTGGGCGCGGTCTACAGCCCCGACTTCTATGCAGGCAC 617
Query 741 GGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTATATACTTCTG 814
|||.|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 618 GGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTG 691
Query 815 CAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAGGCCGCGGT 888
|||||||.||||||||.|||||.||.|||||.||.||.||.||.|||||||||||.|||||.||||||||.|||
Sbjct 692 CAATGCCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGT 765
Query 889 CGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGAGTAGTGTATCA 962
||||||||||||||||||||||||||.||.||||||||||||||.|||||||||||.|||||.||.||.||.||
Sbjct 766 CGCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGTGTTGTTTACCA 839
Query 963 AGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTATGCTGCATACCGCTACGCCCAGCC 1025
.|| || |.||||| ||||| ||||||||||||||.||||||||.||||||||
Sbjct 840 GGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTATGCTGCGTACCGCTATGCCCAGCC 899
Query 1026 TACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAAATTTCTTGTA 1099
.|||||||||||||||||||||||||||||
Sbjct 900 CACCCCTGCCACTGCCGCTGCCTACAGTGA-------------------------------------------- 929
Query 1100 ACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCCCACCTACG 1173
||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 930 ---------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACACACTTGCTCCAGCCCCCACCTACG 994
Query 1174 GCGTTGGTGCCA-------------------------------------------------------------- 1185
||||||||||||
Sbjct 995 GCGTTGGTGCCATGCCCCAAGGTTCCAGCCCCAGCACAGACTTCAGAGGAGCTAAGCTGCAGACTTCCAGGCCT 1068
Query 1186 --------------- 1185
Sbjct 1069 CTGCTGTCAGGCAGC 1083