Nucleotide Global Alignment
Description
- Query:
- TRCN0000466975
- Subject:
- XR_001746256.1
- Aligned Length:
- 5992
- Identities:
- 191
- Gaps:
- 5777
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTAACAGTTCGCGGCAGTTCGCGCGGGAGCGGGGCGCCTGGGTGGATGGGCGCTTGGGCGCCTGGGCTGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACGGTGGGAACGGAAGTCGCTGTGGGACGCTGAGGAAGCCAGGATGGCGACTCCGAGCAAGAAGACGTCAACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAAGCCCCCAGCCTTCCAAGAGAGCTCTCCCGAGAGACCCTTCGTCGGAGGTCCCGAGCAAGAGGAAGAATTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCCGCAGCTGCCGCTGTTGCAGTCGTCCGGGCCTTTCGTGGAAGGCTCTATCGTCCGCATCTCGATGGAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCCTAACATATGATATTTGTGAAGTATCTCCTGGACCCCACTTGAATATGATCGTTGGAGCCAATGGAACAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAAGTCGAGCATTGTGTGTGCCATTTGCCTTGGTTTAGCTGGAAAACCTGCTTTCATGGGACGAGCAGATAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTTGGGTTTTTTGTGAAGAGAGGATGTTCTAGAGGCATGGTTGAAATTGAATTGTTCAGGGCTTCTGGAAATCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTAATCACCCGTGAGATTGATGTGGCAAAAAATCAGTCCTTTTGGTTCATCAACAAAAAATCTACAACCCAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAATAGTGGAAGAGAAAGTTGCAGCCTTAAATATTCAAGTGGGGAATCTTTGCCAGTTTCTCCCTCAGGACAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTGGAGAATTTGCTAAACTCAGCAAAATTGAACTCCTCGAAGCCACTGAAAAGTCAATTGGTCCCCCAGAAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCACAAATATCACTGTGAACTCAAAAACTTAAGGGAGAAAGAAAAACAGCTCGAGACCTCATGCAAAGAGAAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGAGTATCTACAGAAAATGGTTCAGAGGAATGAAAGATATAAACAAGATGTGGAGAGGTTCTATGAACGGAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGACATTTAGATTTAATTGAGATGCTTGAAGCAAAAAGGCCATGGGTGGAATATGAAAATGTTCGTCAGGAATA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGAAGAAGTAAAACTAGTTCGTGACCGAGTGAAGGAAGAGGTCAGAAAACTTAAAGAAGGGCAGATTCCTGTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATGTCGAATTGAAGAAATGGAAAACGAGCGTCACAATTTGGAGGCTCGAATCAAAGAAAAGGCAACAGATATT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGGAGGCATCTCAAAAATGCAAACAGAAGCAAGATGTTATAGAAAGGAAAGATAAACATATTGAGGAACTTCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAGGCTTTAATAGTAAAGCAAAATGAAGAGCTTGACCGACAGAGGAGAATAGGTAATACCCGCAAAATGATAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGATTTGCAAAATGAACTAAAGACCACGGAAAACTGCGAGAATCTTCAGCCCCAGATTGATGCCATTACAAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GATCTGAGACGGATTCAGGATGAAAAGGCATTATGTGAAGGCGAAATAATTGATAAGCGAAGAGAGAGGGAAAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCTAGAGAAGGAGAAAAAGAGTGTGGACGATCATATTGTACGTTTTGACAATCTTATGAATCAGAAGGAAGATA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCTAAGACAGAGATTCCGTGACACGTATGATGCTGTTTTATGGCTAAGAAATAACAGAGACAAATTTAAACAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAGTCTGTGAGCCCATAATGCTCACGATCAATATGAAAGATAATAAAAATGCCAAATATATTGAAAATCATAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCATCAAATGACTTAAGAGCCTTTGTATTTGAAAGTCAAGAAGATATGGAGGTTTTCCTCAAAGAGGTTCGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACAATAAAAAATTAAGAGTAAATGCTGTTATTGCTCCCAAGAGTTCATATGCAGACAAAGCACCTTCAAGATCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTGAATGAACTTAAACAATACGGATTTTTCTCTTATTTGAGAGAATTATTTGATGCACCTGATCCTGTAATGAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTACCTTTGCTGTCAGTATCATATTCATGAAGTTCCTGTAGGAACTGAAAAGACCAGAGAAAGAATTGAACGGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAATACAAGAAACCCGATTAAAACAGATTTATACAGCAGAAGAAAAGTATGTGGTGAAAACTTCTTTTTATTCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AACAAAGTTATTTCTAGTAACACATCTCTAAAAGTAGCGCAGTTTCTCACTGTCACTGTGGACCTAGAGCAGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAGACACTTAGAAGAACAGCTAAAGGAAATTCATAGAAAATTGCAAGCAGTGGATTCAGGGTTGATTGCCTTAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTGAAACAAGCAAACATCTGGAGCACAAAGACAATGAACTTAGACAAAAGAAGAAGGAGCTTCTTGAGAGAAAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACCAAGAAAAGACAACTGGAACAAAAAATCAGTTCCAAACTAGGAAGTTTAAAGCTGATGGAACAGGATACTTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CAATCTTGAAGAGGAAGAGCGAAAAGCAAGTACCAAAATCAAAGAAATAAATGTTCAAAAAGCGAAACTTGTTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CCGAATTAACAAACCTAATAAAGATTTGTACTTCTTTGCATATACAAAAAGTAGATTTAATTCTCCAAAATACT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACAGTGATCTCTGAGAAGAACAAATTAGAATCAGATTATATGGCCGCATCTTCACAACTCCGTCTTACAGAGCA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ACATTTCATTGAATTGGATGAAAATAGACAGAGATTATTGCAGAAATGCAAGGAACTTATGAAAAGAGCTAGGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAGTATGTAACCTGGGTGCAGAGCAGACTCTTCCTCAAGAATACCAGACAATTCTGGACCCATTCTACCAATTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGCAAGTACCCACCATTCCAAATGGACACAACTCCTCACTCCCCATGGTTTTCCAAGACCTTCCAAACACATTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GATGAAATTGATGCTTTATTAACTGAAGAAAGATCAAGAGCTTCCTGCTTCACGGGACTGAATCCTACAATTGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCAGGAATATACAAAAAGAGAAGAAGAAATAGAACAGTTAACTGAGGAACTAAAGGGAAAGAAAGTTGAACTAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ATCAATACAGGGAAAACATTTCACAGGTAAAAGAAAGGTGGCTTAATCCTTTAAAAGAGCTGGTAGAAAAAATT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AATGAAAAATTCAGCAATTTTTTTAGTTCCATGCAGTGTGCTGGTGAAGTTGATCTCCATACAGAAAATGAGGA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGATTATGATAAATATGGAATTCGAATTAGAGTCAAATTTCGAAGTAGTACTCAACTGCATGAATTAACTCCTC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATCATCAAAGTGGAGGTGAAAGAAGTGTTTCTACCATGTTATACTTGATGGCACTTCAGGAGCTAAATAGATGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CCATTCAGAGTAGTTGATGAAATCAATCAGGGAATGGACCCAATCAATGAACGGAGAGTGTTTGAAATGGTTGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAATACTGCCTGTAAAGAAAATACATCTCAATACTTTTTCATAACACCAAAGCTCCTGCAAAATCTTCCTTATT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTGAAAAGATGACAGTTTTGTTTGTCTACAATGGCCCTCATATGCTGGAACCAAACACATGGAATTTAAAGGCT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TTCCAAAGGCGGCGGCGCCGTATTACATTCACTCAACCTTCTTAATAAAAGTAAAGAGAGGGAACTTGGGAATT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TTTTTTGTTAAATTCTGTTTATAAGTATGGCTCAACTGAATAAAAGGAGATTCACTAAAACGAAAAGCAGTTAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTTTGGAAACCTGCTTTTAAATACAAATAGGTTGATAATGGAAACTATAATGACCTTTCCAAAATAGCAGCTGG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TAGTAAAAGTTAAGTCTTCTTCAGTCTTGGTTGAACTTGAGTTCTTGGCACTCTGACCATGAGTCATTCAGTTC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TCATGTTAAAATGTACTTAATATTACAAATCAAAGGTACAGTGGAAGAAGGGTTAATCACAAGAAGTTACTTAT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATGGTAGCCCTGAGCTTTAATTGCAGAGTAACTTTAATTACTTTTAGAGCCTAAAGATGACTCTAGAGCCTAAG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TCCTAGTTTCTCCCAATGTTATATTTAATTTTAAAAAATTGATATGAAAATGTCTAATGTATAGTAATAATTTA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TGACAGATCTAGTCATTTCTTCCTATTAAAAAAGATTACCTTATCTCCAGTAGGAAATGGAATTTTATGGGCCT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TTAAAAGAAAGTTTTATGAAACTTGATGCTATAATTTTATTGGTATTTCAAGGGGAAAAAAGCACTGGGGTTCA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 AAAATGGTAGCAGAACTGCTTTGAAATGCTGCAAGGTGGCCACTAGATGATGCAAAATACAACCAAAAGATTGA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CTGAGAATAAAATTAGGTGACAAGGGTTTTTAAAGAATAACCTTTTAAAGTGTGGGGGCAGGGGTTGCTTTTTT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TTATTTTATTTAAAGTCAATTATATTTTACATCTTACATTTCTAAAAGCATTTTATAATTATTTTTAGTAAGAT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TTTTCTTAAAATTTCATATACTGGTTTCTACAATTTATATTTGAAATTTCTCAGTGTTATGTAAAGAGTGATGG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 AAAAGCATTGATTTCTTTAAAACCGTAATGTTTTTAGAACTTAAGCCTATAGGGCCTTTCTTACAATGTTGATG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TACCCATTATCTTAGAAAATCTAGTTTAAACTGTTTTCTTTCACCGCAAAAGAATTAAATGGGAAAATCATTTG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TTTATCTCTAAGTTATACTAATTAGTAGAACCAAACAAATTATCTTCTTTTAAAAAATAAATCTTATAGGAAAA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 TAGACAGTCCAAAGTCATGTCTTTGAACAGTGGATTGGATCTGTGCCAGTAATGACAAAATTATTTTTTTGACT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 TGCTTGCCTGAATAAATTGAAGAATTGCTTTCAGTTTGGGTTTTGTATATTCTTAAGTAGCCATTGAAATTTAT 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 ATTCTTAACTAGGTCAAAAAATAATGAGCCATAAGTTTATGTCCTCTCACTTAGACATTTTCTCTTTAAAAAGG 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TATTTTCTTCTTTATAAACATTTTAAAAGAGCCTTCCCTTCTTAAACTAACTCCAGTGCATGAAGTGTGAAAAT 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 ATTTTAAAATGACATTTTTACTAATATGAGCAAGTCATGTAAACATTGAAGAACTTGGTAACATATTAGTAAAT 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 GGATATTACCAAATGTTTTCATCGTTAATTACTTTGCGTTCCACCAAAATATCTTTACTAAAATGTGCTTGGTG 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 TAGTTTGTTTATTGTCTAAATTAGTACCAGTCATCTTATTTCTGCAAAATGAGTATCAATGTGAAAAAGACACG 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 TGAAGATTAAGCATGTTTGAAAATAAAATGGTCAATTACATTTCAATTTACATAGGCCAACAACTGTTCCATAC 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 TTTGTTTGTAAACATTTAATTTCTCTACTGGACAAAATTAATATTTGGCTTTACATTGAATTTTGAGCTGTGAA 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 GAATAAATTATGTATCATTTTAGCATATTAAACAGTAGTAAGTCTAGCACATAGTCTCAGCCACTTAAAACAAA 5328
Query 1 ------------------------------------ATGGAGTCTCACTGTATTGCCCAGGCTGGAGTTCAGTG 38
|||||||||||||.|.||||||||||||||||.|||||
Sbjct 5329 AGTTTTTTTGTTTGTTTGTTTGTTTGTTTTTTTGAGATGGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTG 5402
Query 39 GCACCATCTCGGCTTACTGCAGCCTCCACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGGGTACCT 112
||...||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||..|||.||
Sbjct 5403 GCGTGATCTCGGCTTACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAACT 5476
Query 113 GGGGCTACAGGCGCCCGCTACCACACCCAGCTAATTTTTGTAT--TTTTAATAGACATGAGGTTTCGCCATGTT 184
|||.|.||||||||...|.|||||||||||||||||||| ||| |||||.||||.|||.||||||..|||.||
Sbjct 5477 GGGACAACAGGCGCGTCCCACCACACCCAGCTAATTTTT-TATACTTTTAGTAGAGATGGGGTTTCAGCATATT 5549
Query 185 GGCCAGGCTGTTCTCGAACTCCTGACCT------------------------CAAA------------------ 216
||||||||||.||||||||||||||||| ||||
Sbjct 5550 GGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTATAGGCG 5623
Query 217 -------------------------------------------------------------------------- 216
Sbjct 5624 TGAGCCCCTGCACCCGGCCAAAAGTTGATTTTTAATTACATAAAAATCGTAAAAACTTCTAGTAAAAACTTGAT 5697
Query 217 -------------------------------------------------------------------------- 216
Sbjct 5698 TTGGTGAATACAGTTATATTTAAAAACCTTAAGGTGACAAGCATTTTCTATGCCTAAATCTTCATTGGTTTGCC 5771
Query 217 -------------------------------------------------------------------------- 216
Sbjct 5772 TGGAAAGAGTCTCTGTTAAAAGATTTTCCATATTCAAAGTAAAAGGAAAGATTTCTTGCTTTCTAATTGTCTTT 5845
Query 217 -------------------------------------------------------------------------- 216
Sbjct 5846 TGGACACATGCCTATTTTCTTTGAGGTATAAACCTTTAGATGTGAAAAATGTAATTTCATTCTGCTATTGTGTG 5919
Query 217 ------------------------------------------------------------------------ 216
Sbjct 5920 TGCTTGTGTGTGTGTAATTGAAAAAACTGGGAAATCCTGCTTTGTTGGTAATAAATCAATATTTTTATATTC 5991
