Nucleotide Global Alignment

Description

Query:
TRCN0000466980
Subject:
XR_001740287.1
Aligned Length:
2358
Identities:
1394
Gaps:
963

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAGAAAGGTAAGGGCCCTGGGCGAGGAAAGCGCGGCCCTTTCCGAGTTTGGTGTTTTGCAGCGAAAGGAAATCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCTCTTCCGAAAGTCCTCCAGGGCGAGAGAGGAAAGGGCCTAGGTACTGTGCTGGGGTCGCACAGCCGGCCGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACAGTGCCGGGACGGGGAGCCAGGCTTCCGAGTGCGCCCGGTCACTGACTCCTCCGCGCTTTCCTCGTGCGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGCAGCCCTTGGTTCTTGGAAACGCCGGCGCCTTGTTCAGGGCTGGTGGGGCTGGGGCGCAAGGTGCAGCTGAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AATGCCCGAGAGGAGCCGCAGCCTCTGGTGGAGTTCGGTCGGGTGTGGGGGTAGTCAAGGAAAGAAGCAAAGGG  370

Query    1  -----------------ATGGCAGAAGCTGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTAC  57
                             |||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATACCTCCTCTGAAAAATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTAC  444

Query   58  GAGTCTCCATTGCCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAAT  131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAGTCTCCATTGCCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAAT  518

Query  132  GATTAACAACAATGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAG  205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GATTAACAACAATGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAG  592

Query  206  GTATTCTTTCAAGAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAG  279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTATTCTTTCAAGAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAG  666

Query  280  ACAAACATGCCTATCATCACATCAAAG-----------------------------------------------  306
            |||||||||||||||||||||||||||                                               
Sbjct  667  ACAAACATGCCTATCATCACATCAAAGAGGGGCCATTCTAAGTATATGTGCTGCCGCATCGAGCACTGTTCAGT  740

Query  307  ----------AGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGAGAGTA  370
                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTTCTTAACCAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGAGAGTA  814

Query  371  CAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGGCTCAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGGCTCAA  888

Query  445  GTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCTGTGGT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCTGTGGT  962

Query  519  AAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGGCTCTG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGGCTCTG  1036

Query  593  GCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCTGTTGC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCTGTTGC  1110

Query  667  TGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTCCTGCA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTCCTGCA  1184

Query  741  TCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAGGGAGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAGGGAGG  1258

Query  815  CTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTGAGTAT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTGAGTAT  1332

Query  889  TTGCAACTCAGCCTAGAAGAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAGAAGGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TTGCAACTCAGCCTAGAAGAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAGAAGGA  1406

Query  963  GCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACATGGCCT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACATGGCCT  1480

Query 1037  ACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTACTGCTATATCGG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTACTGCTATATCGG  1554

Query 1111  AAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGCTCTCT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGCTCTCT  1628

Query 1185  CCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACTTATGC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACTTATGC  1702

Query 1259  TGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGATTAAA  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGATTAAA  1776

Query 1333  GTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATCTT-----------  1395
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
Sbjct 1777  GTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATCTTTAACAATTCAA  1850

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1851  CCTCAAATTTCTAATTTCACCAACAACTATTTATTGAGGGCTAGTCTCGCTCTGTCGTCCAGGCTGGAGTCCAA  1924

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1925  TGCTGCGATCTTGGATCACTGCAACCTCTGCCTGCTGGGTTTAAGCGATTCTCATGCCTCAGCCTCCTGAGTAG  1998

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1999  CTGGGATTACAGGCACGCACCACCACACACGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTT  2072

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2073  GGCCAGGCTGGTCTGGAACTCCTGACCTCAAGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGAGAGTACAGG  2146

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2147  CGTGAGCCACTGCATCCAGCTCTTAGCATGTGCTTTTAAAGTAAAAACCACGAGGAGAAGGTACTCATTACTTC  2220

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2221  ATAACTTGTGTCTCACCCACCTTGCTGTCTTCACATCCCCACTTTCTGTATGCACATTGGAAGGTGAATTTGTT  2294

Query 1396  ----------------------------------------------------------------  1395
                                                                            
Sbjct 2295  CAGCTCACATTAATTTATAGGAATAATTTTCATTGCTCTGTGAATAAAATGTGCTACCACTTTA  2358

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