Nucleotide Global Alignment

Description

Query:
TRCN0000466992
Subject:
NR_149726.1
Aligned Length:
2837
Identities:
1104
Gaps:
1574

Alignment

Query    1  ----------------------------------------------------------------ATGGCGGCCA  10
                                                                            |||||.|||.
Sbjct    1  GGTTCGGGCGGCGGGGGCGGGGGCGGGGCCGGGGTGGTGCCAAGGCTGCAGCGGGCCGGGCAAGATGGCTGCCG  74

Query   11  TGGAGACCGAGACGGCGCCGCTGACCCTAGAGTCGCTGCCCACCGATCCCCTGCTCCTCATCTTATCCTTTTTG  84
            |.|||.|||||||||.||.|||||||||.|||||||||||||||||.||.|||||.||||||||||||||..||
Sbjct   75  TAGAGGCCGAGACGGGGCTGCTGACCCTGGAGTCGCTGCCCACCGACCCTCTGCTGCTCATCTTATCCTTCGTG  148

Query   85  GACTATCGGGATCTAATCAACTGTTGTTATGTCAGTCGAAGACTTAGCCAGCTATCAAGTCATGATCCGCTGTG  158
            |||||..||||.||||||||.|||||.|||||.||||||||||||||||||||.||||.|||||||||.|||||
Sbjct  149  GACTACAGGGACCTAATCAATTGTTGCTATGTTAGTCGAAGACTTAGCCAGCTTTCAACTCATGATCCACTGTG  222

Query  159  GAGAAGACATTGCAAAAAATACTGGCTGATATCTGAGGAAGAGAAAACACAGAAGAATCAGTGTTGGAAATCTC  232
            ||||||||||||||||||||||||||||||||||||||||||.|||.|...|||||.||||||.||||.|||.|
Sbjct  223  GAGAAGACATTGCAAAAAATACTGGCTGATATCTGAGGAAGAAAAAGCCGGGAAGAGTCAGTGCTGGAGATCCC  296

Query  233  TCTTCATAGATACTTACTCTGATGTAGGAAGATACATTGACCATTATGCTGCTATTAAAAAGGCCTGGGATGAT  306
            ||||||||||.||.|||||.||.||.||.||.|||||.||||||||.||.||.|||||||||||||||..|||.
Sbjct  297  TCTTCATAGAGACCTACTCAGACGTGGGGAGGTACATCGACCATTACGCCGCCATTAAAAAGGCCTGGCGTGAC  370

Query  307  CTCAAGAAATATTTGGAGCCCAGGTGTCCTCGGATGGTTTTATCTCTGAAAGAGGGTGCTCGAGAGGAAGACCT  380
            ||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.||.||.|||||||||||
Sbjct  371  CTCAAGAAGTACTTGGAGCCCAGGTGTCCTCGGATGGTTTTATCTCTGAAAGAGGGCGCACGTGAGGAAGACCT  444

Query  381  CGATGCTGTGGAAGCGCAGATTGGCTGCAAGCTTCCTGACGATTATCGATGTTCATACCGAATTCACAATGGAC  454
            .||||||||.|||||.|||||.||.||||||||.||.||.||||||||.|||||||||||.||.|||||.||.|
Sbjct  445  GGATGCTGTCGAAGCTCAGATCGGTTGCAAGCTCCCGGATGATTATCGCTGTTCATACCGGATCCACAACGGGC  518

Query  455  AGAAGTTAGTGGTTCCTGGGTTATTGGGAAGCATGGCACTGTCTAATCACTATCGTTCTGAAGATTTGTTAGAC  528
            |.|||||||||||.||.|||||..|||||||.|||||||||||.||||||||.||.|||||||||.|..||||.
Sbjct  519  AAAAGTTAGTGGTGCCGGGGTTGCTGGGAAGTATGGCACTGTCCAATCACTACCGCTCTGAAGATCTACTAGAT  592

Query  529  GTCGATACAGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACTTTTTGCATACA  602
            ||.|||||.|||||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  593  GTTGATACTGCTGCAGGAGGATTTCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACCTTTTGCATACA  666

Query  603  TACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAAAATGAAGTTTTCTACCAATGTC  676
            .||.||.|||||||||||||||||.|||||.|||||||||||.||.||.||.||.|||||.|||||||||||||
Sbjct  667  CACCGGCTTGAGTCAGTACATAGCTGTGGAGGCTGCAGAGGGGCGGAATAAGAACGAAGTGTTCTACCAATGTC  740

Query  677  CAGACCAAATGGCTCGAAATCCAGCTGCTATTGACATGTTTATTATAGGTGCTACTTTTACTGACTGGTTTACC  750
            ||||||||||||||||.|||||.||||||||||||||||||||.|||||||||||||||||.|||||||||||.
Sbjct  741  CAGACCAAATGGCTCGGAATCCTGCTGCTATTGACATGTTTATCATAGGTGCTACTTTTACCGACTGGTTTACA  814

Query  751  TCTTATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATCATCAGAGACCAAATTTTCAGATATGTTCACGATCC  824
            ||.||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||||||.||||.|||||
Sbjct  815  TCCTATGTCAACAATGTTGTATCAGGTGGTTTCCCCATCATCAGAGACCAGATTTTCAGATATATTCATGATCC  888

Query  825  AGAATGTGTAGCAACAACTGGGGATATTACTGTGTCAGTTTCCACATCGTTTCTGCCAGAACTTAGCTCTGTAC  898
            |||||||||.|||||||||||.||||||||.||.|||||.|||||||||||||||||||||||.||||||||.|
Sbjct  889  AGAATGTGTGGCAACAACTGGAGATATTACAGTTTCAGTGTCCACATCGTTTCTGCCAGAACTCAGCTCTGTGC  962

Query  899  ATCCACCCCACTATTTCTTCACATACCGAATCAGGATTGAAATGTCAAAAGATGCACTTCCTGAGAAGGCCTGT  972
            ||||.||.|||||||||||||||||||||||||                                         
Sbjct  963  ATCCGCCACACTATTTCTTCACATACCGAATCA-----------------------------------------  995

Query  973  CAGTTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTTCAAGGACCTGGAGTAGT  1046
                                                                                      
Sbjct  996  --------------------------------------------------------------------------  995

Query 1047  TGGTGAATTTCCAATCATCAGCCCAGGTCGGGTATATGAATACACAAGCTGTACCACATTCTCTACAACATCAG  1120
             ||||||||||||||.||.||||||||||||.||||||||||||||||||||||||||||.|||||||||||||
Sbjct  996  -GGTGAATTTCCAATTATTAGCCCAGGTCGGATATATGAATACACAAGCTGTACCACATTTTCTACAACATCAG  1068

Query 1121  GATACATGGAAGGATATTATACCTTCCATTTTCTTTACTTTAAAGACAAGATCTTTAATGTTGCCATTCCCCGA  1194
            |.|||||||||||.|||||.||||||||||||||.||||||||.||||||.||||||||||||||||.||||||
Sbjct 1069  GCTACATGGAAGGGTATTACACCTTCCATTTTCTGTACTTTAAGGACAAGGTCTTTAATGTTGCCATCCCCCGA  1142

Query 1195  TTCCATATGGCATGTCCAACATTCAGGGTGTCTATAGCCCGATTG------------GAAATGGGT---CCTGA  1253
            |||||.||||||||||||||||||||||||||||||||.||||||            .|.|||.||   ||  |
Sbjct 1143  TTCCACATGGCATGTCCAACATTCAGGGTGTCTATAGCTCGATTGCCTCCCAAGTGCTAGATGTGTGCACC--A  1214

Query 1254  TGAATA----TGAAGAGA----------TGG--AAGA--AGAGGAGGA-----------GG-------AGGA--  1289
            ||..||    .||..|||          |||  ||.|  |||..| ||           ||       ||.|  
Sbjct 1215  TGCCTACACCAGACCAGACTTCCATTCTTGGCCAACACCAGACCA-GACTTCCATTCTTGGTTAGCCCAGAACC  1287

Query 1290  -AGAGGAGGAAGACGAGG----AT--GATGATTCAGCAGATATGGATGA-----ATCAGATGAAGATGAT---G  1348
             |.|.|||     ||.||    ||  .||..||      |.||||.|||     ||||| |||||.|| |   |
Sbjct 1288  TATATGAG-----CGTGGTACCATCCTATCCTT------AAATGGTTGATACTCATCAG-TGAAGCTG-TCTGG  1348

Query 1349  AAGAGGAG------AGACGGAGGAGA--------------------GTCTTTGAT-------GTTCCCATTCGC  1389
            ||..||||      ..|.|| |||.|                    .|||||.||       .||.|.||||  
Sbjct 1349  AACTGGAGTTTGCTTTATGG-GGAAAATTTAAAATATGGACTTAATTTCTTTAATACATATATTTTCTATTC--  1419

Query 1390  AGACGCCGCTGCTCACGCCTTTTT--------------------------------------------------  1413
                           |..|||.||                                                  
Sbjct 1420  ---------------CATCTTGTTTCAGTTTTGGTAATTTGTGCCTTTCATGAAATTTGTTCATTTCATCTAAT  1478

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1479  GTTGAATTTATTAGCATAAAGTTATTTACAATATTCTGTTGATATCCCTTTAATGGCTATAAGAGCTGTAGTCA  1552

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1553  GATAACCTTCTTTTATCCTTAATATTGGTGATTTATATCTTTTTTTTAGCCACATTTCTATTGATCACTCAAAA  1626

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1627  GGAACAACATTTTGTTTTGATGGATTTTCTGTAGTTTGATTTTTTTTTCTATTTCAGCTCTTGGTGCAGTTGTC  1700

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1701  TTTATTTCTCTTCTTTACCTTGGGTTAAATTCACTTTTCTTGTAGCTTTTAAAGGTAGAAGTGTAGATTATTGA  1774

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1775  TTGTAGACCTTTCCTGTTTCTAAGCACTGTTCTAGCTGTATTGTACAAATTTTGATATATTTTGGTTAATATTT  1848

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1849  AGTTCAAAATACTCAAGATTTCCCTTGTAACTGACTTACGACTGCATAGAAATATGTTAATTTTCAAGTGTTTG  1922

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1923  GAAGATTTTAGTTATCTTTTGCTTACTGAGTTTTAATATTATTGTGGTTAGAGAACTTACTTTGTATTGCTAAT  1996

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1997  ATTTTTTAATGTTTTATGACCCCAAATTATGTGAAGAATTTCTATATCTTGATAAATGATCTTTGTGTCTTTGA  2070

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2071  AAAGAATGTATATTCTACCATGTGAGAATTTATTCTATGACAGGCCAAGCTGACTGATTGTTTGACAATGTTTG  2144

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2145  CCAAGTCATCTGTATATTTATTGTTCTTTTTTTTAAACTTTTGTTACTTCAGCCATTGAAGAGATTATTGTTGA  2218

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2219  AATCTTTAGTTAATGGCTTTGTCCATTGATTACTTTATTCTTGTTATATATCTGCCTCATGCATTTTGAAGTGA  2292

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2293  TATAATTGTGTGCCAGTGCTTAGGATTGTTGTCTGTTTATGGAAGTAGTTCTTTGATTCTTATTCAGCTTTACT  2366

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2367  TACATTCCTTGTCCTAAGTTAAGAGCATTGAGGTAATGCATGGGCAGGCAGGCAGCCGAGCAGGGTCAGCTTGA  2440

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2441  TGCTTTTGTTGCTTGTCTTTACTGTTTGTTTCAGTGGATGTAAAGTACGGGCTTTACTAAAAGGCAGTGGTTCT  2514

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2515  CAAGCCTTTGGGTTTCCTCACCTCCTTAGATGTATAAAAACCATTGATGCCTAAGAACCTGTTTACATGGTCAT  2588

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2589  GTCAGTATGTACCATATCAGAAATTCAAATAGGACATTTATAAAAGTATCAGTTCCTTTTAAAACTACAATAAA  2662

Query 1414  -------------------------  1413
                                     
Sbjct 2663  TAAACCCTTTACATGTTCAACCCTC  2687

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