Nucleotide Global Alignment
Description
- Query:
- TRCN0000466992
- Subject:
- XM_011519982.1
- Aligned Length:
- 1514
- Identities:
- 834
- Gaps:
- 664
Alignment
Query 1 ATGGCGGCCATGGAGACCGAGACGGCGCCGCTGACCCTAGAGTCGCTGCCCACCGATCCCCTGCTCCTCATCTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ATCCTTTTTGGACTATCGGGATCTAATCAACTGTTGTTATGTCAGTCGAAGACTTAGCCAGCTATCAAGTCATG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATCCGCTGTGGAGAAGACATTGCAAAAAATACTGGCTGATATCTGAGGAAGAGAAAACACAGAAGAATCAGTGT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TGGAAATCTCTCTTCATAGATACTTACTCTGATGTAGGAAGATACATTGACCATTATGCTGCTATTAAAAAGGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CTGGGATGATCTCAAGAAATATTTGGAGCCCAGGTGTCCTCGGATGGTTTTATCTCTGAAAGAGGGTGCTCGAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGGAAGACCTCGATGCTGTGGAAGCGCAGATTGGCTGCAAGCTTCCTGACGATTATCGATGTTCATACCGAATT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CACAATGGACAGAAGTTAGTGGTTCCTGGGTTATTGGGAAGCATGGCACTGTCTAATCACTATCGTTCTGAAGA 518
||||||||||||||||||||||||||||||||
Sbjct 1 ------------------------------------------ATGGCACTGTCTAATCACTATCGTTCTGAAGA 32
Query 519 TTTGTTAGACGTCGATACAGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACTT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33 TTTGTTAGACGTCGATACAGCTGCCGGAGGATTCCAGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACTT 106
Query 593 TTTGCATACATACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAAAATGAAGTTTTC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 107 TTTGCATACATACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCAGAGGGCCGAAACAAAAATGAAGTTTTC 180
Query 667 TACCAATGTCCAGACCAAATGGCTCGAAATCCAGCTGCTATTGACATGTTTATTATAGGTGCTACTTTTACTGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TACCAATGTCCAGACCAAATGGCTCGAAATCCAGCTGCTATTGACATGTTTATTATAGGTGCTACTTTTACTGA 254
Query 741 CTGGTTTACCTCTTATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATCATCAGAGACCAAATTTTCAGATATG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 CTGGTTTACCTCTTATGTCAAAAATGTTGTATCAGGTGGCTTCCCCATCATCAGAGACCAAATTTTCAGATATG 328
Query 815 TTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTGTCAGTTTCCACATCGTTTCTGCCAGAACTT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 329 TTCACGATCCAGAATGTGTAGCAACAACTGGGGATATTACTGTGTCAGTTTCCACATCGTTTCTGCCAGAACTT 402
Query 889 AGCTCTGTACATCCACCCCACTATTTCTTCACATACCGAATCAGGATTGAAATGTCAAAAGATGCACTTCCTGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 403 AGCTCTGTACATCCACCCCACTATTTCTTCACATACCGAATCAGGATTGAAATGTCAAAAGATGCACTTCCTGA 476
Query 963 GAAGGCCTGTCAGTTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTTCAAGGAC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 GAAGGCCTGTCAGTTGGACAGTCGCTATTGGAGAATAACAAATGCTAAGGGTGACGTGGAAGAAGTTCAAGGAC 550
Query 1037 CTGGAGTAGTTGGTGAATTTCCAATCATCAGCCCAGGTCGGGTATATGAATACACAAGCTGTACCACATTCTCT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 551 CTGGAGTAGTTGGTGAATTTCCAATCATCAGCCCAGGTCGGGTATATGAATACACAAGCTGTACCACATTCTCT 624
Query 1111 ACAACATCAGGATACATGGAAGGATATTATACCTTCCATTTTCTTTACTTTAAAGACAAGATCTTTAATGTTGC 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 ACAACATCAGGATACATGGAAGGATATTATACCTTCCATTTTCTTTACTTTAAAGACAAGATCTTTAATGTTGC 698
Query 1185 CATTCCCCGATTCCATATGGCATGTCCAACATTCAGGGTGTCTATAGCCCGATT-------------------- 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 699 CATTCCCCGATTCCATATGGCATGTCCAACATTCAGGGTGTCTATAGCCCGATTGCCTAGGGTTCTGTCTTTCT 772
Query 1239 ------GGAAATGGGT---------CCTG-------ATGAATATGAAG---AG-----ATG----------GAA 1272
|||.|||.|| |||| ||| ||.|||| || ||| |.|
Sbjct 773 CTCCTGGGACATGTGTCTTTGACACCCTGAGCCACCATG--TAAGAAGTCCAGCTACCATGAAGCCGTCATGCA 844
Query 1273 GAAGAG-----GAGGAG----------GAGGAAGA-GGAGGAAGACGAGGA-----TGATGATTCAG----CAG 1321
|||||| |..||| |||..||| |||||.| .|.|||| .|.||.||||| |||
Sbjct 845 GAAGAGACCATGTAGAGACATCACACAGAGATAGAGGGAGGCA-CCCAGGAGCCCCAGCTGTTTCAGACTCCAG 917
Query 1322 ATA--TGGAT------------GAATCAG--ATGAAGATGATGAAGAGGAGAGACGGAGGAGAGTCTTTGATGT 1379
||| ||||| |.|.||| |||
Sbjct 918 ATATTTGGATCATCCTGCGCGGGTACCAGACATG---------------------------------------- 951
Query 1380 TCCCATTCGCAGACGCCGCTGCTCACGCCTTTTT 1413
Sbjct 952 ---------------------------------- 951