Nucleotide Global Alignment

Description

• Query: TRCN0000467028
• Subject: XM_006507012.1
• Aligned Length: 1356
• Identities: 616
• Gaps: 654

Alignment

Query    1  ATGCTCTGCGGCCGCCCGCGGTCCAGCTCCGACAACAGGAATTTTCTCCGAGAGCGGGCCGGGCTCAGTTCAGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGCTGTCCAGACCCGGATCGGCAACAGTGCCGCCTCCAGACGTTCTCCTGCCGCTCGCCCGCCCGTCCCAGCGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCCCAGCCCTCCCGCGAGGGCGCCCCGGGACGGAAGGATCCACCAGTCTGTCGGCGCCCGCCGTTCTCGTGGTC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GCCGTCGCCGTCGTCGTGGTGGTAGTCTCCGCCGTCGCCTGGGCCATGGCCAATTACATCCACGTCCCTCCCGG  296
                                                         |||||||||||||||||||||||.|||||
Sbjct    1  ---------------------------------------------ATGGCCAATTACATCCACGTCCCGCCCGG  29

Query  297  CTCCCCGGAGGTGCCCAAGCTGAACGTCACCGTTCAGGATCAGGAGGAGCATCGCTGCCGGGAGGGGGCCCTGA  370
            |||.||.||||||||.|||||..||||.||.||.|||||.|||||||||||.||||||||.||.||.|||||||
Sbjct   30  CTCGCCCGAGGTGCCGAAGCTCGACGTGACGGTGCAGGACCAGGAGGAGCAGCGCTGCCGCGACGGCGCCCTGA  103

Query  371  GCCTCCTGCAACACCTGCGGCCTCACTGGGACCCCCAGGAGGTGACCCTGCAGCTCTTCACAGATGGAATCACA  444
            ||||.||||..|||||||||||.|||||||||||||.||||||||||||||||||.|||||||||||.||||||
Sbjct  104  GCCTGCTGCGGCACCTGCGGCCGCACTGGGACCCCCGGGAGGTGACCCTGCAGCTGTTCACAGATGGGATCACA  177

Query  445  AATAAACTTATTGGCTGTTACGTGGGAAACACCATGGAGGATGTAGTCCTGGTGAGAATTTATGGCAATAAGAC  518
            ||.||.||.||.|.|||.||.|||||..||||||||||.||||||||.||||||||.|||||.|||||.|||||
Sbjct  178  AACAAGCTCATCGCCTGCTATGTGGGTGACACCATGGAAGATGTAGTTCTGGTGAGGATTTACGGCAACAAGAC  251

Query  519  TGAGTTATTAGTCGATCGAGATGAGGAAGTAAAGAGTTTTCGAGTGTTGCAGGCTCATGGGTGTGCACCACAAC  592
            |||..|.||||||||.|||||.||||||||.||.|||||.||.|||.||||||||||.||.||||||||.||.|
Sbjct  252  TGAACTGTTAGTCGACCGAGACGAGGAAGTGAAAAGTTTCCGCGTGCTGCAGGCTCACGGCTGTGCACCTCAGC  325

Query  593  TCTACTGTACCTTCAATAATGGACTATGCTATGAATTTATACAAGGAGAAGCACTGGATCCAAAGCATGTCTGC  666
            |||||||.|||||.|||||.|||||.||||||||.|||||.||.||.|||||..||||.||..|||||||||||
Sbjct  326  TCTACTGCACCTTTAATAACGGACTGTGCTATGAGTTTATCCAGGGCGAAGCTTTGGACCCGCAGCATGTCTGC  399

Query  667  AACCCAGCCATTTTCAGGCTAATAGCTCGTCAGCTTGCTAAAATCCATGCTATTCATGCACACAATGGCTGGAT  740
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  400  AACCCAGCCATTTTCAGGCTAATAGCTCGTCAGCTTGCTAAAATCCATGCTATTCATGCGCACAATGGCTGGAT  473

Query  741  CCCCAAATCTAATCTTTGGCTAAAGATGGGAAAGTATTTCTCTCTCATTCCCACAGGATTTGCAGATGAAGACA  814
            ||||||||||||.||.|||||||||||||||||.||||||||||||||||||||.||||||||.||||||.|||
Sbjct  474  CCCCAAATCTAACCTATGGCTAAAGATGGGAAAATATTTCTCTCTCATTCCCACCGGATTTGCTGATGAAAACA  547

Query  815  TTAATAAAAGGTTCCTAAGTGATATCCCAAGCTCTCAGATTCTCCAGGAAGAGATGACTTGGATGAAGGAGATT  888
            ||||||||||||||||.|||||.|||||||||.|.|||.||||.|||||.|||||||||||||||||.|||.|.
Sbjct  548  TTAATAAAAGGTTCCTGAGTGAGATCCCAAGCCCGCAGCTTCTGCAGGAGGAGATGACTTGGATGAAAGAGCTG  621

Query  889  CTTTCCAACCTGGGCTCACCTGTTGTGCTTTGCCATAATGACCTATTGTGTAAGAATATAATCTACAATGAGAA  962
            |||||.|.|||||||||||||||.||.|||||||||||.|||||.|||||||||||||||||||||||.|||||
Sbjct  622  CTTTCAAGCCTGGGCTCACCTGTGGTCCTTTGCCATAACGACCTGTTGTGTAAGAATATAATCTACAACGAGAA  695

Query  963  ACAAGGTGATGTACAGTTCATTGATTATGAATATTCTGGATACAACTACCTGGCATATGATATTGGAAATCATT  1036
            |||||||                                                                   
Sbjct  696  ACAAGGT-------------------------------------------------------------------  702

Query 1037  TCAATGAATTTGCAGGTGTGAGTGATGTAGACTATAGTCTGTATCCAGATAGAGAACTACAGAGTCAGTGGCTG  1110
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query 1111  CGTGCTTACCTTGAAGCCTACAAAGAATTTAAGGGCTTTGGGACTGAAGTTACTGAAAAGGAGGTAGAAATACT  1184
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query 1185  CTTCATTCAAGTCAATCAGTTTGCATTGGCTTCTCATTTCTTTTGGGGATTGTGGGCTTTGATTCAAGCCAAAT  1258
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query 1259  ACTCCACTATTGAGTTTGATTTCCTTGGGTATGCAATTGTTCGTTTTAACCAGTACTTTAAAATGAAGCCTGAG  1332
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query 1333  GTTACTGCATTAAAAGTGCCTGAG  1356
                                    
Sbjct  703  ------------------------  702