Nucleotide Global Alignment

Description

Query:
TRCN0000467045
Subject:
NM_001305018.1
Aligned Length:
1259
Identities:
874
Gaps:
301

Alignment

Query    1  ---------------------------------ATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  41
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGACCGATCCGTCGCTGGGGCTGACAGTCCCCATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  74

Query   42  CGGGGCCGGACCCGAGTGGAGGGAGCCGGGGGCTGTGAGCTTCGCGGACGTGGCCGTGTACTTCTGCCGGGAGG  115
            ||||||.|||.||||||||||..||||.|||||.|||||||||||.|||||||||||||||||||.||||||||
Sbjct   75  CGGGGCGGGATCCGAGTGGAGAAAGCCCGGGGCCGTGAGCTTCGCCGACGTGGCCGTGTACTTCTCCCGGGAGG  148

Query  116  AGTGGGGCTGCTTGCGGCCAGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGAGC  189
            |||||||||||.|||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  149  AGTGGGGCTGCCTGCGGCCCGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGGGC  222

Query  190  GCTCTCGGAATCGGAGGCAACAAGCCAGCTCTCATCTCCTGGGTGGAGGAGGAGGCCGAACTGTGGGGTCCGGC  263
            ||.||||||.|||||||||.||||||.||.|||||||||||||||||||||.|||||||||||||||.||||||
Sbjct  223  GCGCTCGGAGTCGGAGGCAGCAAGCCGGCGCTCATCTCCTGGGTGGAGGAGAAGGCCGAACTGTGGGATCCGGC  296

Query  264  TGCCCAGGATCCGGAGGTGGCGAAATGTCAGACACAAACGGACCCAGCAGATTCCAGAAACAAGAAAAAGGAAA  337
            ||||||||||||||||||||||||.||||.||||.||.||||||||||||||||||||||||||.||.||||||
Sbjct  297  TGCCCAGGATCCGGAGGTGGCGAAGTGTCCGACAGAAGCGGACCCAGCAGATTCCAGAAACAAGGAAGAGGAAA  370

Query  338  GACAAAGGGAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGCTGAAGTCTCCC  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct  371  GACAAAGGGAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGCTGAAGGCTCCC  444

Query  412  CAAGCCCCCTCGGCCGGGCCCCCTTATGGTTGGGAGCAGCTGTCCAAGGCACCGCACCGGGGACGCCCCTCCCT  485
            ||||||||||..||||||            |.||||||||||||||||||.|.||.||||.|.||||||..|.|
Sbjct  445  CAAGCCCCCTTTGCCGGG------------TTGGAGCAGCTGTCCAAGGCCCGGCGCCGGAGTCGCCCCCGCTT  506

Query  486  CTGTGCCCACCCCCCTGTCCCCCGAGCTGACCAGCGTCATGGCTGCTACGTGTGCGGGAAGAGCTTTGCCTGGC  559
            .|.||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||
Sbjct  507  TTTTGCCCACCCCCCTGTCCCCCGAGCTGACCAGCGTCACGGCTGCTACGTGTGCGGGAAGAGCTTCGCCTGGC  580

Query  560  GCTCCACACTGGTGGAGCACGTCTACAGTCACACTGGCGAGAAGCCCTTCCACTGCACTGACTGCGGCAAGGGC  633
            ||||||||||||||||||||.|.|||||.||||..|||||||||||||||||||||.|.|||||||||||||||
Sbjct  581  GCTCCACACTGGTGGAGCACATTTACAGCCACAGGGGCGAGAAGCCCTTCCACTGCGCAGACTGCGGCAAGGGC  654

Query  634  TTCGGCCACGCTTCCTCCCTGAGCAAACACCGGGCCATCCATCGTGGGGAGCGGCCCCACCGCTGTCTGGAGTG  707
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||||
Sbjct  655  TTCGGCCACGCTTCCTCCCTGAGCAAACACCGGGCCATCCATCGTGGGGAGCGGCCCCACCGCTGTCCCGAGTG  728

Query  708  TGGCCGGGCCTTCACGCAGCGCTCGGCGCTGACTTCGCACCTGCGCGTCCACACCGGCGAGAAACCCTATGGCT  781
            |||.||||||||||.||..|||.|||||||||||||.|||||||||||.|||||                    
Sbjct  729  TGGTCGGGCCTTCATGCGCCGCACGGCGCTGACTTCTCACCTGCGCGTTCACAC--------------------  782

Query  782  GCGCCGACTGTGGCCGCCGCTTCAGCCAGAGCTCTGCCCTCTACCAGCACCGGCGCGTGCACAGCGGCGAGACC  855
                                                                                      
Sbjct  783  --------------------------------------------------------------------------  782

Query  856  CCCTTCCCCTGCCCGGACTGTGGCCGCGCCTTCGCCTACCCCTCGGACCTGCGGCGCCACGTGCGCACCCACAC  929
                                                                                      
Sbjct  783  --------------------------------------------------------------------------  782

Query  930  CGGCGAGAAGCCCTACCCGTGCCCGGACTGCGGGCGCTGCTTCCGCCAGAGCTCGGAGATGGCAGTCCACAGGC  1003
                                                                                      
Sbjct  783  --------------------------------------------------------------------------  782

Query 1004  GCACCCACAGCGGCGAGAAGCCCTACCCCTGCCCGCAGTGCGGCCGCCGCTTTGGCCAGAAGTCAGCCGTGGCC  1077
                      .||||||||||||||||.||||||||||||.||||||.||||.||||.||||.|.|.|.|||||
Sbjct  783  ----------TGGCGAGAAGCCCTACCGCTGCCCGCAGTGTGGCCGCTGCTTCGGCCTGAAGACCGGCATGGCC  846

Query 1078  AAACACCAGTGGGTTCATCGGCCCGGGGCCGGGGGCCACAGGGGCCGGGTCGCC--GGGCGTCTGTCTGTGACC  1149
            ||.|||||.|||||.|||||||||||||.||.|||.|..|||||||||  ||||  |||.|.||||||||||||
Sbjct  847  AAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGGGCGTAGGGGCCGG--CGCCCTGGGGGGCTGTCTGTGACC  918

Query 1150  CTGACCCCTGGCCACGGAGACCTGGACCCGCCCGTGGGCTTCCAGCTGTACCCGGAGATATTCCAGGAGTGTGG  1223
            |||||.||||.||.|||.||||||||||||||.|||||||||||||||||.||.||||||||||||||.|||||
Sbjct  919  CTGACTCCTGTCCGCGGGGACCTGGACCCGCCTGTGGGCTTCCAGCTGTATCCAGAGATATTCCAGGAATGTGG  992

Query 1224  G  1224
            |
Sbjct  993  G  993