Nucleotide Global Alignment
Description
- Query:
- TRCN0000467145
- Subject:
- NR_158988.2
- Aligned Length:
- 3348
- Identities:
- 1569
- Gaps:
- 1779
Alignment
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1 GCTAATTCCCCGCTACCGGGTTGCGGCCGGAAGCCGGGCGCCGCGGCTCTGCTTCCCTCGGGGATCTGGCGACA 74
Query 2 TGGCCAGAAAGGCTCTCAAGCTTGCTTCGTGGACCAGCATGGCTCTTGCTGCCTCTGGCATCTACTTCTACAGT 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGCCAGAAAGGCTCTCAAGCTTGCTTCGTGGACCAGCATGGCTCTTGCTGCCTCTGGCATCTACTTCTACAGT 148
Query 76 AACAAGTACTTGGACCCTAATGACTTTGGCGCTGTCAGGGTGGGCAGAGCAGTTGCTACGACGGCTGTCATCAG 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AACAAGTACTTGGACCCTAATGACTTTGGCGCTGTCAGGGTGGGCAGAGCAGTTGCTACGACGGCTGTCATCAG 222
Query 150 TTACGACTACCTCACTTCCCTGAAGAGTGTCCCTTATGGCTCAGAGGAGTACTTGCAGCTGAGATCTAAGGTGC 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTACGACTACCTCACTTCCCTGAAGAGTGTCCCTTATGGCTCAGAGGAGTACTTGCAGCTGAGATCTAAGGTGC 296
Query 224 ACCTTCGCTCTGCCAGGCGTCTCTGTGAGCTCTGCTGTGCCAACCGGGGCACCTTCATCAAGGTGGGCCAGCAC 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACCTTCGCTCTGCCAGGCGTCTCTGTGAGCTCTGCTGTGCCAACCGGGGCACCTTCATCAAGGTGGGCCAGCAC 370
Query 298 CTGGGGGCTCTGGACTACCTGTTGCCAGAGGAGTACACCAGCACGCTGAAGGTACTGCACAGCCAGGCTCCACA 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGGGGGCTCTGGACTACCTGTTGCCAGAGGAGTACACCAGCACGCTGAAGGTACTGCACAGCCAGGCTCCACA 444
Query 372 GAGCAGCATGCAAGAGATCCGCCAGGTCATCCGAGAAGATCTGGGCAAGGAGATCCATGATTTGTTCCAGAGCT 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGCAGCATGCAAGAGATCCGCCAGGTCATCCGAGAAGATCTGGGCAAGGAGATCCATGATTTGTTCCAGAGCT 518
Query 446 TCGATGACACCCCTCTGGGGACGGCCTCCCTGGCCCAGGTCCACAAGGCAGTGCTGCATGATGGGCGGACGGTG 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCGATGACACCCCTCTGGGGACGGCCTCCCTGGCCCAGGTCCACAAGGCAGTGCTGCATGATGGGCGGACGGTG 592
Query 520 GCCGTGAAGGTCCAGCACCCAAAGGTGCGGGCTCAGAGCTCGAAGGACATTCTCCTGATGGAGGTGCTCGTTCT 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCGTGAAGGTCCAGCACCCAAAGGTGCGGGCTCAGAGCTCGAAGGACATTCTCCTGATGGAGGTGCTCGTTCT 666
Query 594 GGCTGTGAAGCAGCTGTTCCCAGAGTTTGAGTTTATGTGGCTTGTGGATGAAGCCAAGAAGAACCTGCCTTTGG 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCTGTGAAGCAGCTGTTCCCAGAGTTTGAGTTTATGTGGCTTGTGGATGAAGCCAAGAAGAACCTGCCTTTGG 740
Query 668 AGCTGGATTTCCTCAATGAAGGGAGGAATGCTGAGAAGGTGTCCCAGATGCTCAGGCATTTTGACTTCTTGAAG 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCTGGATTTCCTCAATGAAGGGAGGAATGCTGAGAAGGTGTCCCAGATGCTCAGGCATTTTGACTTCTTGAAG 814
Query 742 GTCCCCCGAATCCACTGGGACCTGTCCACGGAGCGGGTCCTCCTGATGGAGTTTGTGGATGGCGGGCAGGTCAA 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTCCCCCGAATCCACTGGGACCTGTCCACGGAGCGGGTCCTCCTGATGGAGTTTGTGGATGGCGGGCAGGTCAA 888
Query 816 TGACAGAGACTACATGGAGAGGAACAAGATCGACGTCAATG--------------------------------- 856
|||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGACAGAGACTACATGGAGAGGAACAAGATCGACGTCAATGAGGTGAGGTCAAGAGCTCAGGGCTGCTGTGCCG 962
Query 857 -----------------------------------------------AGATCTCACGCCACCTGGGCAAGATGT 883
|||||||||||||||||||||||||||
Sbjct 963 GGGAACGTGGGCTTGGTCAAGGCTGCCCAGGAAGTGCCTGTGTGTCCAGATCTCACGCCACCTGGGCAAGATGT 1036
Query 884 ATAGTGAGATGATCTTCGTCAATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGGTGCGGAAGCAC 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATAGTGAGATGATCTTCGTCAATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGGTGCGGAAGCAC 1110
Query 958 CCCGGCACGGGAAAGGCGGAGATTGTCCTGTTGGACCATGGGCTTTACCAGATGCTCACGGAAGAATTCCGCCT 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCCGGCACGGGAAAGGCGGAGATTGTCCTGTTGGACCATGGGCTTTACCAGATGCTCACGGAAGAATTCCGCCT 1184
Query 1032 GAATTACTGCCACCTCTGGCAGTCTCTGATCTGGACTGACATGAAGAGAGTGAAGGAGTACAGCCAGCGACTGG 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAATTACTGCCACCTCTGGCAGTCTCTGATCTGGACTGACATGAAGAGAGTGAAGGAGTACAGCCAGCGACTGG 1258
Query 1106 GAGCCGGGGATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCGTGGGACTCGGTCAACAGAGGCATC 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAGCCGGGGATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCGTGGGACTCGGTCAACAGAGGCATC 1332
Query 1180 AGCCAAGCTCCCGTCACTGCCACTGAGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTCCCCCAGATCAG 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGCCAAGCTCCCGTCACTGCCACTGAGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTCCCCCAGATCAG 1406
Query 1254 CCATCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCGTGGCATTGAGG 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCATCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCGTGGCATTGAGG 1480
Query 1328 CCGCCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAGCGCTAGCTGAG 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCGCCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAGCGCTAGCTGAG 1554
Query 1402 CACAAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTCAACTTATGGCA 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CACAAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTCAACTTATGGCA 1628
Query 1476 GATCAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCTTGGCCCTAATATGCT 1549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GATCAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCTTGGCCCTAATATGCT 1702
Query 1550 GGCTGTTCCCTGCTCCACTC------------------------------------------------------ 1569
||||||||||||||||||||
Sbjct 1703 GGCTGTTCCCTGCTCCACTCTGAGTGGAATTGCTCTCCCTGCCCCATTCTGGTGTCTTTCCACTCCTCAGCCCC 1776
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 1777 TCATCTTGCCTCCACCCAGCTGCTCCATTTTTGCCACATCGTGGCCCGCAGCCCCAGAGTCACTGTCCATGTCA 1850
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 1851 CCATCCTTCTCCTCCTTTGGAATCCTCTCCGCACACTGTGGCCCTTGTCTCAGGGCCCACAAGCTGAACTGTGG 1924
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 1925 CATAGCTCTCTCTTCTTCTCCAAGAAGACTCAGCAGCCTACATTCCCATTCCTGGTATGTGCCATTGGGTTGGA 1998
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 1999 TGTCCCCACTACTTCCGTTAACCCTTCCCATTGTCAAGATGTGCCACGGGTGCCACTGGGGGCACACTGAACTT 2072
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2073 GTAGGGAGTGTGATTTTGTTGGAGGTGCACATGGTCTCTGAATTTGACAGAGAACACCTTCCCTTTCCTTGCCA 2146
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2147 TGTCACCCTCCAGAGGAAGTCACACCTCAGCGAGGTGGTTTGGCATCTGGGGCCAACTCCATTACAGCTATGAG 2220
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2221 CTCACTGCTGTCAGTGACGTTTGGTGTTTTCTGTACTGTGTTTCAATAAAAACTCCTTCAAGGTTGCAGGATTT 2294
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2295 GTCCATCATAACTCACTGGCCTCCCACCTGACCCCAGGCACGTGCCCTTCCAGAATGTGCTCATGGTCCTCGCC 2368
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2369 AAGGGCTTATGGTTCCTCTTGGTTGCTGCTTCCTCAGGGTTTCCCAGGGAGATCTAGGGAACAGAAGGCCAGGG 2442
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2443 GCTGTTTGGTGGGATTTTCCTTATAGGTTGGGAGTTCACCTACAATGCCCATTAGGTCAGAGTGGACCTGAATC 2516
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2517 GAGTATTGGTGTGATCTTCTGCTTGGCTTCTTGCTCCTGTAATCCTTCCAACCTGTGGGGCCACTTCCACTATG 2590
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2591 GGGCCACTTCCTGCTTCTTGGGGGTTTCTCTTACCTTCCAAGACTCAGACTCTGGTTGGAGGAGTTAAGAAGCC 2664
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2665 CAAGGCCAGGAACTCAGAGGCTCAGCTGAAACCTTGGACCTTGTTTTTCTGTGACCTGGGTACCAACCTTGTTC 2738
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2739 TACTGTTTCCTGACTTATCCCTTTGGTTCTCATTCAGTGGCCCCAGTTTTAGGCCTGGAATTCTACTTGTCTCC 2812
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2813 CCCCAGTCCTTCTGGAGACCTTAGTCCTCTTGCTGAAACCTCCGTCACTGTGGCTGGGTTTTCACTGGGAAACT 2886
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2887 TCTGTGTTTCTACCCCATTGCTTGCTGCCAGCACTGCCTCTCCCCCCAGCCTGGTTGTCTGCTTCTGTTTCTTG 2960
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2961 GACATCCCTAAGCTCCTGCTCTAATTCCCATGTCTTTGTCTTTGGCAGGTCCTACTGTCTGCTTTCACGGACAG 3034
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3035 TAATTGTATTTGAGCCTCTCTGATCTTACTTCACCCAATTCACAAGGGCAGAAAAAATCCTGAATTTGAGCCTA 3108
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3109 ATTTTCTGTACTCTTTATTCATAGTACAGCAAGCAGATTTTTCAGTGATCAGTGACAATTCACAATCCTTTTAT 3182
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3183 TTCCCAAAAGAATTAATTGTTCTTAGTGACCAGTTGGATGCACCCAGGGACCTGAGAGTATAATTTGCAATATC 3256
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3257 TGATTATTAATCTTGAGGATGTGTGCTGCATAGTATATTTTATGGTGTCTTTTATAGCCACTGAAGTAAATATA 3330
Query 1570 ------------------ 1569
Sbjct 3331 AATGTCCTTTCTGTTCAA 3348
