Nucleotide Global Alignment
Description
- Query:
- TRCN0000467160
- Subject:
- NR_147086.2
- Aligned Length:
- 4647
- Identities:
- 2555
- Gaps:
- 2083
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGCGGCCGGAAGCGCGGCCTTGTTGGGGGCCCCCGTTGCCCGCCTCCCAGTAGCCGCGCCTCACCCTAGGCCA 74
Query 1 ---------------------------------------------------------------------ATGGG 5
|||||
Sbjct 75 GGAATGGTTTTAGGGAAGACTGTTGCCGGATGACAAGGCTGTCACTATTGTTCTGTACTACCTGACATTATGGG 148
Query 6 ACCAGGCCAGCCTGCACCAACCTGTGTTCATCTAGCACCTAGGACCCAACTTGATGGGAGGAGCGACCCCAAAG 79
||||||||||||.||..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACCAGGCCAGCCAGCTTCAACCTGTGTTCATCTAGCACCTAGGACCCAACTTGATGGGAGGAGCGACCCCAAAG 222
Query 80 TACTTCAGACCCAGAACCAGCTGCAGTTTAATAGGAATGTTCCTACACATTCAAGCAACTTGGCGATCCGATAT 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TACTTCAGACCCAGAACCAGCTGCAGTTTAATAGGAATGTTCCTACACATTCAAGCAACTTGGCGATCCGATAT 296
Query 154 TCTTGCCCACATGCCATTAGAATTGAAAAACTGAAGCACTCATACAATGAATCATACCATTGTAAAGATGCAGA 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCTTGCCCACATGCCATTAGAATTGAAAAACTGAAGCACTCATACAATGAATCATACCATTGTAAAGATGCAGA 370
Query 228 TTGTAGAGTTGGTCCTGACCTGGGCAGTTCTGTTTCATTTTCCGTCATATCCCAAGAGAGACTTAGCTATGCTG 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTGTAGAGTTGGTCCTGACCTGGGCAGTTCTGTTTCATTTTCCGTCATATCCCAAGAGAGACTTAGCTATGCTG 444
Query 302 TCCACCTAGCCAGAAGAGATGTGAAACGAAGACAATTTGAAAAACATATAAAAGAACATCATCTCAGAAGTCAG 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCCACCTAGCCAGAAGAGATGTGAAACGAAGACAATTTGAAAAACATATAAAAGAACATCATCTCAGAAGTCAG 518
Query 376 CCTCAAAGCTCTCAGAAGTGTGGACATACTAAGTATAAAATACCCGACCACAGGGTGGAAAGGAAGGAATCAAA 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTCAAAGCTCTCAGAAGTGTGGACATACTAAGTATAAAATACCCGACCACAGGGTGGAAAGGAAGGAATCAAA 592
Query 450 GAGTCAAGCAGCCTGTCAGTGTAGCCACCAGCCATCCAAAGTAGAAATCTCCAGCTCCGGTGCCAAAGTATACC 523
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 593 GAGTCAAGCAGCCTGTCAGTGTAGCCACCAGCCATCCAAAGTAGAAATCTCCAGCTCTGGTGCCAAAGTATACC 666
Query 524 TTTACTCATCTCATCCAGGCCAGTCAGATCTTACTGTGCCAAATTCGCCACCCACCCATGATCCGGGACTTCAG 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTTACTCATCTCATCCAGGCCAGTCAGATCTTACTGTGCCAAATTCGCCACCCACCCATGATCCGGGACTTCAG 740
Query 598 CCTCATCCCAGGATAGGTGACCACAAAAACATAAGTGAACAGAAAAGCCTGCTAGAAGTCCAGCGACTCCAGAA 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTCATCCCAGGATAGGTGACCACAAAAACATAAGTGAACAGAAAAGCCTGCTAGAAGTCCAGCGACTCCAGAA 814
Query 672 AGAACTGAGCAGTTGTATCCACAAAATTGAAGAGGTAACTAAAAAAGATAGACTAGAAGAAGCTTTGGATCCAG 745
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAACTGAGCAGTTGTATCCACAAAATTGAAGAGGTAACTAAAAA----------------------------- 859
Query 746 ATGAAGAACGTCGAATCCGTATCAGGAGACAGGAGCAAGCTGCTCGCTCTGCCCGAATGCTCTACGTCCTCCAG 819
Sbjct 860 -------------------------------------------------------------------------- 859
Query 820 CAGCAGGTAAAAGAAATCCAGGAAGAATTGGATAAATTGAGTCCACATAAAATTAAACACACTAAGAAGTCATG 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 860 ----AGGTAAAAGAAATCCAGGAAGAATTGGATAAATTGAGTCCACATAAAATTAAACACACTAAGAAGTCATG 929
Query 894 GGCAATGTCTAAGCTGGCGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGATGTTTGTCACTCAGTTTACTG 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 930 GGCAATGTCTAAGCTGGCGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGATGTTTGTCACTCAGTTTACTG 1003
Query 968 ACCGAGGGGAGCATCCACTTCCTGCTCGGTGTAAGGAACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTCT 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1004 ACCGAGGGGAGCATCCACTTCCTGCTCGGTGTAAGGAACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTCT 1077
Query 1042 GTCAAGCTGGATGCAGACCCTTCTGTTCCTGATGTGGTTATAGATATTCTGCAACAAATTGAGGCTTTGGAATC 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 GTCAAGCTGGATGCAGACCCTTCTGTTCCTGATGTGGTTATAGATATTCTGCAACAAATTGAGGCTTTGGAATC 1151
Query 1116 TCTCCTGGAAAAGAAACTGTCACCAAAAAAGGTGAAAAAATGTTTCAGTGAAATTCGGAGCAGATTTCCTATCG 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152 TCTCCTGGAAAAGAAACTGTCACCAAAAAAGGTGAAAAAATGTTTCAGTGAAATTCGGAGCAGATTTCCTATCG 1225
Query 1190 GTAGCCAAAAGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGCCCCTCACAGCAAAGGAC 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1226 GTAGCCAAAAGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGCCCCTCACAGCAAAGGAC 1299
Query 1264 ACATTCCCACAGGAAACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCCGATAAGTATCAGCCCAATACGGA 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 ACATTCCCACAGGAAACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCCG---------------------- 1351
Query 1338 GCTTCCGGAGACCCAGAGGTTGCAGAGTGAGCTTGATGTATTAGATGCGGATATAGTTCCGGAAGAAGGACCAT 1411
Sbjct 1352 -------------------------------------------------------------------------- 1351
Query 1412 TTATTCTAGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAGCCGTGGCAAAAACAAAAGCAGGGAAAAAGAAG 1485
Sbjct 1352 -------------------------------------------------------------------------- 1351
Query 1486 CCTGTGACTGAGAATGTGCCGTTTAGGAAGAAAGATACTCTGGCGCCAGCAAGACAGCAAGGACTCCGCAAAGC 1559
||||||||||||||
Sbjct 1352 ------------------------------------------------------------GGACTCCGCAAAGC 1365
Query 1560 TGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAA 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1366 TGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGACAACAGTTTCATCCAGATTAAAAA 1439
Query 1634 TGAACCGGCAGCCTGTGAAAGACCGCAAGGCACCATGGATACCCCCAAACCCCACATCCCCACCAGCGTCTCCT 1707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 TGAACCGGCAGCCTGTGAAAGACCGCAAGGCACCATGGATACCCCCAAACCCCACATCCCCACCAGCGTCTCCT 1513
Query 1708 AAATGTGCCGCATGGCTAAAGGTGAAAACTAGCCCCAGAGATGCCACAAAAGAGCCTCTCCAGCAAGAAGATCC 1781
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1514 AAATGTGCTGCATGGCTAAAGGTGAAAACTAGCCCCAGAGATGCCACAAAAGAGCCTCTCCAGCAAGAAGATCC 1587
Query 1782 TCAAGAGGAAAGTCACCTGACAGGTGCTGTTGAGCATGAAGCAGCCAGGCTCGCTTGGCTTGATGCTGAAACTT 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1588 TCAAGAGGAAAGTCACCTGACAGGTGCTGTTGAGCATGAAGCAGCCAGGCTCGCTTGGCTTGATGCTGAAACTT 1661
Query 1856 CCAAAAGATTGAAGGAACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGATTGG 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662 CCAAAAGATTGAAGGAACTAGAAGAGTTAAAAGCCAAGGAAATTGACAGCATGCAAAAACAGAGGCTTGATTGG 1735
Query 1930 CTTGATGCTGAAACTTCTAGAAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAACA 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1736 CTTGATGCTGAAACTTCTAGAAGAACAAAGGAACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAACA 1809
Query 2004 ATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGG 2077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 ATTGAGTGTTTCTGCCACCCACTTAGCAGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGG 1883
Query 2078 TCAAGGCCCAGAGAGTCAATTCTACTACAGAAGCAAATATTCATTTGAAAGATGGCTCGTCAGTAAACACAGCG 2151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1884 TCAAGGCCCAGAGAGTCAATTCTACTACAGAAGCAAATATTCATTTGAAAGATGGCTCGTCAGTAAACACAGCG 1957
Query 2152 CCAGGCCAGCCTGCACAGGAGGTTGCAGCTGTTGATTTTGAATCCAACAACATTCGTCAGCTTGATGATTTTTT 2225
..||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1958 AAAGCCCAGCCTGCACAGGAGGTTGCAGCTGTTGATTTTGAATCCAACAACATTCGTCAGCTTGATGATTTTTT 2031
Query 2226 GGAAGATTGTGCCAGTGAGCTCTGGGCTGTGACTCATGCTAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTG 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2032 GGAAGATTGTGCCAGTGAGCTCTGGGCTGTGACTCATGCTAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTG 2105
Query 2300 AGGACAGCAAGGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATACCAGGAGTCT 2373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2106 AGGACAGCAAGGATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATACCAGGAGTCT 2179
Query 2374 GTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAACAATGACCAAAA 2447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2180 GTTCGTCAAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAACAATGACCAAAA 2253
Query 2448 AATCTCAGCAATAAGTGAAAAGCCTCTATCTCCTCATCCAATCAGAATCACGAAGACAGTGGATCGCAAGGATC 2521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2254 AATCTCAGCAATAAGTGAAAAGCCTCTATCTCCTCATCCAATCAGAATCACGAAGACAGTGGATCGCAAGGATC 2327
Query 2522 CAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAGGA 2595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2328 CAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGGAAGGA 2401
Query 2596 TCAGAGAAAAGAGAGGCCCCTCTTCTCTCCCTAGCCGAAGATTCTCAACAGAAAGAAGGCCGAGCTCCCCTCTT 2669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2402 TCAGAGAAAAGAGAGGCCCCTCTTCTCTCCCTAGCCGAAGATTCTCAACAGAAAGAAGGCCGAGCTCCCCTCTT 2475
Query 2670 TGTCCCACCGGGTATGCGGCACAGCATCGGTGACTACTGTAGTCGTTTTGAGCAGTACCTTCGGATCATATCTC 2743
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2476 TGTCCCACCGGGTATGCAGCACAGCATCGGTGACTACTGTAGTCGTTTTGAGCAGTACCTTCGGATCATATCTC 2549
Query 2744 ATGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTG 2817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2550 ATGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAGCTGAAAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTG 2623
Query 2818 GGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGATTATGCAGAAGCTGTGTTCACCTCAGAATTCTTAGA 2891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2624 GGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGATTATGCAGAAGCTGTGTTCACCTCAGAATTCTTAGA 2697
Query 2892 GGCTGCTACA---------------------------------------------------------------- 2901
||||||||||
Sbjct 2698 GGCTGCTACATAAAGGCTCTCTGAGGCGAGGCCATTTGTGTCACACTGGAGAAGGGATGGCACCACCCTTTGTT 2771
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 2772 TTGGCCCACAGGAAATTTTCATCCTCAGCTGTCCATCCAGGCCCAGAAGGTGCTGCCCACTGAAAGGAAGGCAG 2845
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 2846 TGCCGGGGAGGTCATCCTCACTTTGCATTTTCTTTTGTCATGGCAATGGTTCTGGAAATGTATGATGCAATGTA 2919
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 2920 TCACACTTATCAGTGCCCAGGCAACACAACTTGATTATGGCAATATTTTCAGAATGTGTACTTTTCCTATTGAA 2993
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 2994 ATACCATGTTCATTCCTCTGGCTCAGTTTGGTGATGAAAATGTTTTGAAAGATAATCGATACGTATATTTCACA 3067
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3068 CAAGGATTCAGGTTGCTGTTGAACCCTTGCTGGCATTGATACCAACACAAGTGCGGCTACTAGCTGGTCCCATC 3141
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3142 ACGGGGCCCCTGTTTTGCATCTTTGGCGATTTCCTGTCAGGACCTCTGGCCCTACTAGGCTGTAGACTCAGGGA 3215
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3216 GAGCACAGTCTGGCTGTGCTGCCAAACCTCTCCTCTGCTGCAGTTTATTCCAAACAGGAGCCCCCTGGCTGTCA 3289
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3290 GTGCACAATAATAGACACACATTTCTTCAACGTTCCATTCCTAGGTGATTTTCACATTTTTAGTTCCTCAGCAT 3363
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3364 ATTTTATTGCTGTGTGTTGACACAATCTGGTATAAAAAACTTTCTCTGGATTCAGAGGAAGTTTGAGGAATCAG 3437
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3438 GAGAGGACCAGGCCTTCTCCTGTGCCTGGGTGAAGGTACAGACCTCGCTGTGTCTCCGATGAGGTCAGAAGTGT 3511
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3512 CTCTATTTCATACCACAAAGGAACCCAAGTGGGAGTAGGGAACAGATGGATGGCGCGAAGACCTCTGTGTCTCC 3585
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3586 CCAGAGAAAGGAAGAAACTTAAGAACCATCATAGCCTGGTCCTCCAACATCTTACAGATCATGTTTTCCAAGAG 3659
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3660 AAAAGCCTGTGTTTTCAGAAACTCTGAATTCAGAAAAAGAAACGGAATGTGCGTAAGAATCAGGCCACTGCCTG 3733
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3734 GAAAGACTTTCTCTCAATTCGTAGCCTGAGGCTCAGTGAAGGAAACATGCAGAAAGAATGCCTGAGACGCCCCC 3807
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3808 AGGGAATAAGGGAACTCTTTATAACCTGTCCAGTGCCGTCATCTGGGATTTTTCTCTGAAGTACAAGAATTTCA 3881
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3882 GGTGATTTAAGCTGCTTGATCACACTTATTTGTGCAAAATTGATTTTCATTTAATGTTAATGTTTTCCTGCTTA 3955
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 3956 ATTTTATATAACTTCAGAATGTAAAGAGCTTCAAGGTAAATTACAGGGTGTTTAACCTGGGGAGTTAAATGTGT 4029
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 4030 ACACTTGAATTAATAGGAGCACCGGTTGTTGCTAGTATAAAGTAATTTGTGTGGCAGTTTGTACTGTGCTGAGT 4103
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 4104 TTTTAAAATAAACCCAATATTTTAAAGTATGTGCCTATTTTAAATAACTTACATCTCCTTTTTTTCCCACAGGC 4177
Query 2902 -------------------------------------------------------------------------- 2901
Sbjct 4178 AAAGTGAAATGTGATTTACAGAAACCACTGAGAATACTTTTATATGTGATATGACTATAGTGGATTATTTGCCA 4251
Query 2902 ----------------------------------------------------------- 2901
Sbjct 4252 CCCCTTCCCCCCGAGAAAAAAATTAGTGACAATAAAAGCTAACATTTATTGAGCACCTA 4310
