Nucleotide Global Alignment
Description
- Query:
- TRCN0000467173
- Subject:
- XM_011247350.2
- Aligned Length:
- 2633
- Identities:
- 751
- Gaps:
- 1756
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTACAGTCCCTGCTACAGGTGGACCGCCATACTGTCTTCAGCATCATCACTAACTTCATGCGATCACGAGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAGGTGATGGATGGGGAGAAGGATCCCCGTAATCTCCTGCTGGCTTTCCGCATCGTCCATGACCTCATCTCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGACTACAGTCTGGGACCTTTCGTGGAAGAGTTATTTGAAGTGACATCTTGTTATTTCCCTATTGATTTTACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCGCCTAACGATCCTTATGGCATCCAGAGAGAGGATCTCATCCTGAGTCTCCGTGCTGTGCTGGCGTCTAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCGCGCTTTGCCGAGTTCTTACTGCCTCTGCTAATTGAGAAAGTGGATTCGGAGATTTTAAGTGCCAAGCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTCTCTGCAAACTCTGAATGCTTGCTGTGCTGTGTATGGACAGAAGGAGCTGAAGGACTTCCTGCCCAGCCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGGGCTTCCATCCGTAGAGAGGTTTTCCAGACTGCTAGTGAGCGAGTAGAGGCAGAGGGCCTGGCAGCTCTCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCCCTGACTGCGTGTCTGTCCTGCTCTGTGCTGAGAGCTGATGCTGAGGACCTCCTTGGTTCCTTCCTCAGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACATCCTTCAAGACTGCAGGCACCATCTATGTGAACCAGACATGAAACTTGTATGGCCTAGCGCTAAGCTGTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGGCAGCTGCAGGTGCGTCTGCCCGGGCCTGTGAGCACCTCACCAGCAACGTGCTTCCCTTGCTGCTGGAACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTTCCACAAGCACAGCCAGAGCAACCAGCGTCGGACAATCCTTGAAATGATCCTGGGATTCCTAAAGCTACAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAAATGGAGCTATGAAGACAGAGATGAAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGTGTTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCCAGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGGTCTCCTGTCTGCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTACCGACTGACCTTCCTGGAGGAAGATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCAGAGTTGTAGGGTGGCCGCACTGGAGGCATCAGGAACCCTGGCCACTCTGTATCCTGGAGCCTTCAGCAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CACTTGCTCCCCAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCAGATGGTCCCACCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGTTCCCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTGTCAAGGAGACAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCCTCTGCTACTGCAGCATCTCTGTCAAGCAAACAAAGGGAATATGGTTACAGAGTCCAGTGAAGTTGTTGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTCTGTCAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAGCTACTGGTATTTCCACAAGAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCTGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAATCCTCAGTTCTGAGAAAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TACTGTTGGAGGATGAGGTCTTGGCTGCGTTGGCATCTGTCATTGGCACTGCCACTACCCATCTGAGCCCTGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTAGCTGCCCAGAGCGTCACATGCATCGTGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTACCTGAAAACAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTTCCCTGACCAGTTCCAGCCGTTCCAGGATGGCTCCTCTGGGCAGAGGCGGCTGGTTGCACTACTTACGGCTT 1702
Query 1 --------------------------------------------------ATGCGGGAGCTTTTGGAACTGAGC 24
|||||||||||||||.|.|.||||
Sbjct 1703 TTGTCTGCTCCCTGCCACGAAATGTGGAAATCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGAAGCAGAGC 1776
Query 25 TGCTGCCACAGCTGCCCCTTTTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGACTCCTCAACAAGCACCCTGC 98
||..||||||||||.||.||.||.|||||.||.||..|.||||||||||||||.||||||||||||||.|||.|
Sbjct 1777 TGTGGCCACAGCTGTCCTTTCTCCTCCACTGCCGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCC 1850
Query 99 AGGGCAGCAGCTGGATGAATTCCTACAGCTAGCTGTGGACAAAGTGGAGGCTGGCCTGGGCTCTGGGCCCTGTC 172
||||||||||.||||.||.|||||.|||||.|||||||.||.|||||||||.|||||||.|||||...|||..|
Sbjct 1851 AGGGCAGCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCCTGGCCTCTGAATCCTCCC 1924
Query 173 GTAGTCAGGCCTTCACTCTTCTTCTCTGGGTAACAAAGGCCCTAGTGCTCAGATACCATCCTCTCAGCTCCTGC 246
||..||||||.|||||.||.||.|||||||||||.|||||.|||||.||||||||||||||||||||..|||||
Sbjct 1925 GTGATCAGGCTTTCACACTGCTGCTCTGGGTAACCAAGGCTCTAGTCCTCAGATACCATCCTCTCAGTGCCTGC 1998
Query 247 CTTACAGCCCGGCTCATGGGCCTCCTGAGTGACCCAGAATTAGGTCCAGCAGCAGCTGATGGCTTCTCTCTGCT 320
||.||..|||||||||||||||||||.|||||.||||||.|.||....||||||||||||||||||||||||||
Sbjct 1999 CTGACCACCCGGCTCATGGGCCTCCTCAGTGATCCAGAACTTGGCTGTGCAGCAGCTGATGGCTTCTCTCTGCT 2072
Query 321 CATGTCTGACTGCACTGATGTGCTGACTCGTGCTGGCCATGCTGAAGTGCGGATCATGTTCCGCCAGCGGTTCT 394
||||||||||||||||||||||.||||||||||.|||||||||||.||.|||||||||||||||||||||||||
Sbjct 2073 CATGTCTGACTGCACTGATGTGTTGACTCGTGCCGGCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGTTCT 2146
Query 395 TCACAGATAATGTGCCTGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAACTACTTGAAG 468
|||||||.||||||||||||||||||||.||.||||||||.||||||||||||||||||||||||||..|||||
Sbjct 2147 TCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGATGTGAAGCCAAACTATCTGAAG 2220
Query 469 GGTCTTTCTCATGTACTTAACAGGCTGCCCAAGCCTGTACTCTTGCCAGAGCTGCCCACGCTTCTTTCCTTGCT 542
|||||.|||||.|||||.||||||||||||||||||||.||.||.||||||||||||||.||||||||||||||
Sbjct 2221 GGTCTGTCTCACGTACTCAACAGGCTGCCCAAGCCTGTGCTTTTACCAGAGCTGCCCACACTTCTTTCCTTGCT 2294
Query 543 GCTGGAGGCCCTGTCCTGCCCTGACTGTGTGGTGCAGCTCTCCACCCTCAGCTGCCTTCAGCCTCTTCTACTGG 616
||||||.||..|.|||||||||||||.||||||.|||||.|||||.||.|||||.||.||.||.||.|||||||
Sbjct 2295 GCTGGAAGCATTATCCTGCCCTGACTCTGTGGTCCAGCTTTCCACTCTGAGCTGTCTCCAACCCCTACTACTGG 2368
Query 617 AAGCACCCCAAGTCATGAGTCTTCACGTGGACACCCTCGTCACCAAGTTTCTGAACCTCAGCTCTAGCCCTTCC 690
|||||||.|||.|||||||||||||.||.|||||.||.||.||.||.||.||||||||||||||.||....||.
Sbjct 2369 AAGCACCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTCCTGAACCTCAGCTCCAGTTACTCA 2442
Query 691 ATGGCTGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCTCACTCGCCTGCCCACCCCTGTGCTGCTGCCGTA 764
||||||||||||||.||.||.||||||||.|||||.||||||||||||||.|||||..|||||||.|||||.||
Sbjct 2443 ATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCTACTGCCATA 2516
Query 765 CAAACCACAGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGT 838
||||.|.|||||.||.||.|||||||||||.||.|||||.||||||||||||||.|||||.|||||||||||||
Sbjct 2517 CAAATCTCAGGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGT 2590
Query 839 CAGCCAGAGGGGAG--TGGTTTCTGTTGGGGAGCCCTGGCAGC 879
|||| |||||||| |||||.||..|.||||||||.||.|||
Sbjct 2591 CAGC--GAGGGGAGAATGGTTCCTACTTGGGAGCCCGGGGAGC 2631
