Nucleotide Global Alignment

Description

Query:
TRCN0000467230
Subject:
XR_001737264.2
Aligned Length:
4431
Identities:
566
Gaps:
3861

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCTTGTTCCCAGGGGCAGTTGGCGGAAGAGATCGAGCTCCCTGGCTGCCGGCTCGCCTTCTGCGTGGAGTTCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCGGTCTGGGTTTCGCTGTCTGCTCTTGGCCCGGGGTCATTTTGTCGGCGTCGGGTGCCCTCTCTTGCCCAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGGGCACAGCGAGGCGGCCCCTTCTCCCGACGACGTTCGATGGAGTAGGGTCCCAGACCGTTGTCCCGAAGAG  222

Query    1  ------------------------------------------------------------ATGGCTAACAACAG  14
                                                                        ||||||||||||||
Sbjct  223  CGAGATCGAGCTTGGCCCCCTCCCCCCCCTCCTTCCCTCCCTCCTTCCTTCCGCCGCAACATGGCTAACAACAG  296

Query   15  CCCCGCGCTGACAGGCAACTCGCAGCCGCAGCACCAGGCGGCTGCAGCTGCGGCTCAGCAACAGCAGCAGTGCG  88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCCCGCGCTGACAGGCAACTCGCAGCCGCAGCACCAGGCGGCTGCAGCTGCGGCTCAGCAACAGCAGCAGTGCG  370

Query   89  GCGGCGGCGGCGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAAG  162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCGGCGGCGGCGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAAG  444

Query  163  ACCATGAACCTCAACCCCATGATCCTGACCAACATCCTGTCGTCGCCTTACTTCAAAGTACAGCTCTACGAGCT  236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ACCATGAACCTCAACCCCATGATCCTGACCAACATCCTGTCGTCGCCTTACTTCAAAGTACAGCTCTACGAGCT  518

Query  237  CAAGACCTACCACGAGGTGGTGGACGAGATCTACTTTAAGGTCACGCACGTTGAACCATGGGAGAAAGGAAGCA  310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAAGACCTACCACGAGGTGGTGGACGAGATCTACTTTAAGGTCACGCACGTTGAACCATGGGAGAAAGGAAGCA  592

Query  311  GGAAAACAGCGGGCCAGACAGGGATGTGCGGAGGGGTTCGAGGTGTTGGAACAGGAGGAATTGTTTCTACAGCA  384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGAAAACAGCGGGCCAGACAGGGATGTGCGGAGGGGTTCGAGGTGTTGGAACAGGAGGAATTGTTTCTACAGCA  666

Query  385  TTTTGCCTGTTATACAAATTATTTACCCTGAAGTTAACTCGAAAGCAAGTGATGGGTCTTATAACACACACAGA  458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTTTGCCTGTTATACAAATTATTTACCCTGAAGTTAACTCGAAAGCAAGTGATGGGTCTTATAACACACACAGA  740

Query  459  CTCTCCATATATTAGAGCGCTTGGATTTATGTATATAAGATATACACAGCCCCCTACAGATCTGTGGGACTGGT  532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTCTCCATATATTAGAGCGCTTGGATTTATGTATATAAGATATACACAGCCCCCTACAGATCTGTGGGACTGGT  814

Query  533  TTGAATCCTTCCTTGATGATGAAGAGTTCT-TCACC------CTC-----------------------------  570
            ||||||||||||||||||||||||||.|.| |||.|      .||                             
Sbjct  815  TTGAATCCTTCCTTGATGATGAAGAGGTATGTCAACAAGGATATCTGCAGCGATTATATTTGGAAATACTGTAT  888

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct  889  ATCTGAACACTTAAATGTGTGTTTGGGACTGACAATAGCTGACTAACATGTCCTGAGCTGTGAGAGGGCATAGC  962

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct  963  AAGAAGGCCTTCATGCGGTAATGACCCTTTTCAGAGACAATGGTCATCATGGATTATGCGTTTCCAATTATTTG  1036

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1037  TTCATTTATTTATTTTCTACATAACTAAATTAGAAACCTCACTGCTTCATGGCAGTTGGTTTGCTATTGCTTCC  1110

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1111  AGTTTTATTAGGGCTTCATTTTATATTAGAGCTGTTAAAAGATAACCTTTAGACAGGAATTATCTAAAGTAGAT  1184

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1185  CATATGTAGCTAGGTTATGGTGCAAGGTATATGATGTGTGCAAATATGTCCACAGAAATAAATACATAGTAGGT  1258

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1259  ATGTGGAATGTAAATTTAAGTCAATCGTTCCGCATAGTTTAGAAATGTAAGGGGCTTTTTCATATTGTTAACTG  1332

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1333  AGTGAGATCAGTTCCCTTTATGCCTGTGAGGCTGCAGGGTTTGTTCTCACTTGCATGCACACACTAAGCCCAAA  1406

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1407  TATTTCTGTTCATTCATTGTCAGATCAGGATATGAAAATAAAATTTTTCTGTTAGTTTTTTTTGTATTGAGATT  1480

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1481  CCAAAGATGGTAATATTTTTATAATATTCATGTATATATGGAAATACTTTTTTTGACGGCTAGGGTATCTTTTG  1554

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1555  TGTTTCTGTAGGACCTAGATGTGAAGGCTGGTGGAGGCTGTGTAATGACCATTGGAGAAATGCTACGATCTTTT  1628

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1629  CTCACAAAACTGGAGTGGTTTTCTACCTTGTTTCCAAGAATTCCAGTTCCAGTTCAAAAGAATATTGATCAACA  1702

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1703  GATTAAAACCCGACCTAGAAAAATCAAGAAAGATGGGAAGGAAGGTGCTGAGGAAATAGACAGACATGTTGAAC  1776

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1777  GCAGACGTTCAAGGTCTCCAAGGAGATCTCTGAGTCCACGGAGGTCCCCAAGAAGGTCAAGAAGTAGAAGTCAT  1850

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1851  CATCGGGAGGGCCATGGGTCTTCTAGTTTTGACAGAGAATTAGAAAGAGAGAAAGAACGCCAGCGACTAGAGCG  1924

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1925  TGAAGCCAAAGAAAGGGAGAAAGAACGGCGAAGATCCCGAAGTATTGACCGGGGGTTAGAACGCAGGCGCAGCA  1998

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1999  GAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAAGTCGTGATAGGAAAGGGGATAGAAGGGACAGGGATCGAGAA  2072

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2073  AGAGAGAAAGAAAATGAGAGAGGTAGAAGACGAGATCGTGACTATGATAAGGAAAGAGGAAATGAACGAGAAAA  2146

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2147  AGAGAGAGAGCGATCAAGAGAAAGGTCCAAGGAACAGAGAAGTAGGGGAGAGGTAGAAGAGAAGAAACATAAAG  2220

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2221  AAGACAAAGATGATAGGCGGCACAGAGATGACAAAAGAGATTCCAAGAAAGAGAAAAAACACAGTAGAAGCAGA  2294

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2295  AGCAGAGAAAGGAAACACAGAAGTAGGAGTCGAAGTAGAAATGCAGGGAAACGAAGTAGAAGTAGAAGCAAAGA  2368

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2369  GAAATCAAGTAAACATAAAAATGAAAGTAAAGAAAAATCAAATAAACGAAGTCGAAGTGGCAGTCAAGGAAGAA  2442

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2443  CTGACAGTGTTGAAAAATCAAAAAAACGGGAACATAGTCCCAGCAAAGAAAAATCTAGAAAGCGTAGTAGAAGC  2516

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2517  AAAGAACGTTCCCACAAACGAGATCACAGTGATAGTAAGGACCAGTCAGACAAACATGATCGTCGAAGGAGCCA  2590

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2591  AAGTATAGAACAAGAGAGCCAAGAAAAACAGCATAAAAACAAAGATGAGACTGTGTGAAAATATTTTGTAAAAG  2664

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2665  TGGATCACATTGAATCCTATAAATGATTAAATCTGCTTTTTTCCCCCACGTTGAGATTGTGCAGTAGTTCGCAC  2738

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2739  TCCTCAAGCTCTCCCTGTAGGCTGCATTTTCATTTCCTCTTTCGTGTAGGGAAGTGCCTTTGTAATTCCATTTA  2812

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2813  TTGCATTGGTGTTTTCACCCAATTGTTAAGTTTGATACATGATGCACAGATTGTTCTTGCATTTTTATTGTTTG  2886

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2887  TTTTTGAAATGTACAGTCTGTACATATGTCCTGAAAATGTTTTAATTCCTTTGGCATGGTTGCCATGTTGGTTA  2960

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2961  AATTTGTATAAGGCAATAAACTGCCACTAATCTATTTTTGTTTTGTAGGTGTGGGATTATGGTTTGTGTACTGA  3034

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3035  AGTTAGCATGGCTGTGCTTTTCGTAATAGAATGCTAAAGACTTTGAGAATGGATCTTGGATGTCTATTATAGGA  3108

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3109  GAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTTGTCTACTGTATATTATCTTGG  3182

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3183  AAGGCTCTTGTTAATATGTTACACTTAATATTCTCCACAGTTACCTTTAGAGAGAATTTATGAGAAGTTAGTTT  3256

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3257  CTGATGCAGAGGTTTTTAGGCTGTGATTTCATCAAAAGTCCTTTTAGCATTCTACCTCAAAGGGACACTTAGTA  3330

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3331  TGCCTAAAATTTATTCACTTAGTTTTCCTTTTTTATTTGAAAAAATACATGACATGTAATCTTTTTTTCTTGAA  3404

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3405  TTCTTTCTCAGATTTTAAAGTACTATATTAAAGAAAAAAATTAATGTCTAAAGCCTAGCATTCTTGCAGAACCC  3478

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3479  TATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAGTAGAGAAACAGATTCAAGCCTCAAGCTTCCAAAGC  3552

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3553  ATTTTTATAAATGGAAAATCCTTAAATTATGAAACAGCTTGATATAGTGTCCTTTTTTTAAAATTCAGAACTTT  3626

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3627  TTTTATTGATAATGGAGATTGCTGTTTGAGTTTTTAAACTTAATCTAGAACAGAGGAGTATTAAAAGTAATGCT  3700

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3701  GTGCTGCATTATTTAAGACTATCAGCAAATTATTTGATAGATTGTTCTTACAACTTGTATTCTGATTACAGAAC  3774

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3775  CATCATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTCCCCCATTTGTTAAATT  3848

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3849  TTTTTAGCATATTTATATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAG  3922

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3923  TGCCCAGATGACAAGTGAATTTTGGAGAAATGCATAGACTGGGATTGGGCATGTGGTAATCAATAATCTTTATT  3996

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3997  AGAATACTTGATAATGGCAGTTCCCTTTGTCAGTGGTTGTTACATGTGTCATTTGATTACTTTGTTCCATGTCA  4070

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 4071  AAGACGTTTATTGGGATACCTTTTACTTGGACAATATGTTAGCATTTTTTAAAATTTGGACTTGAAATTCTTTA  4144

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 4145  AGATAATTCACCCAATTCTTTTTAGAAAAGAAAATAGAGGCCCAAAGTAATGATGTCAGTGCTAGGGCTAAAAC  4218

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 4219  TCAGTATTCTGACAGTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA  4292

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 4293  CTAATGCGCACTCAGAAGCCACCTTGCAAAAATGTTAAATGGAGCAAACGAGTACACTTGCAAGAGTCCTCCAT  4366

Query  571  -----------------------------------------------------------------  570
                                                                             
Sbjct 4367  ATGTGGGCTTAACATATGTACCACTCCATTTTAGAAAAATCTCATTAAATGAATTCTTCTAAAAA  4431

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