Nucleotide Global Alignment
Description
- Query:
- TRCN0000467233
- Subject:
- XM_011534301.3
- Aligned Length:
- 2957
- Identities:
- 860
- Gaps:
- 2086
Alignment
Query 1 ATGAACAATGTCATCGTCCGCCTCTCCCAGATCAGTGAGGATGTCATCAGACTCTTCAAAAAGAGCAAGGAGAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGGCCTGCAGATGCACGAGGAGCTCCTGAAGGTGACCAATGAGCTCTACACAGTCATGAAAACCTACCACATGT 148
|||||||||||||||||||
Sbjct 1 -------------------------------------------------------ATGAAAACCTACCACATGT 19
Query 149 ACCATGCAGAGAGCATCAGTGCGGAAAGCAAGCTGAAGGAGGCTGAGAAGCAGGAGGAGAAGCAGTTCAATAAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 20 ACCATGCAGAGAGCATCAGTGCGGAAAGCAAGCTGAAGGAGGCTGAGAAGCAGGAGGAGAAGCAGTTCAATAAG 93
Query 223 TCAGGAGACCTCAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGATTGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 94 TCAGGAGACCTCAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGATTGA 167
Query 297 GAAGATGAAGGAGAAGAGGCAGGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATGACTACT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 168 GAAGATGAAGGAGAAGAGGCAGGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATGACTACT 241
Query 371 TGCTCAATCTGGCAGCCACCAACGCAGCTATAAGCAAATACTACATCCATGATGTCTCTGATCTGATCGATTGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 242 TGCTCAATCTGGCAGCCACCAACGCAGCTATAAGCAAATACTACATCCATGATGTCTCTGATCTGATCGATTGC 315
Query 445 TGTGATTTGGGCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGAC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 316 TGTGATTTGGGCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGAC 389
Query 519 CTCTCGCCACGAAGGGCTGGATGTCATTGAGAATGCAGTGGACAACCTGGATTCCCGAAGTGACAAGCACACAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 390 CTCTCGCCACGAAGGGCTGGATGTCATTGAGAATGCAGTGGACAACCTGGATTCCCGAAGTGACAAGCACACAG 463
Query 593 TCATGGACATGTGCAATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCCCCACATGGGGGATGAGGTC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 464 TCATGGACATGTGCAATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCCCCACATGGGGGATGAGGTC 537
Query 667 TGCCAGGTCAGCGCTCAGCAGCCCGTCCAGACAGAACTGCTCATGCGTTATCACCAGCTGCAGTCCAGACTGGC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 538 TGCCAGGTCAGCGCTCAGCAGCCCGTCCAGACAGAACTGCTCATGCGTTATCACCAGCTGCAGTCCAGACTGGC 611
Query 741 CACCCTCAAGATAGAGAATGAGGAGGTTAGGAAAACCCTGGATGCCACCATGCAGACATTACAGGACATGCTGA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 612 CACCCTCAAGATAGAGAATGAGGAGGTTAGGAAAACCCTGGATGCCACCATGCAGACATTACAGGACATGCTGA 685
Query 815 CTGTGGAGGACTTTGATGTCTCCGATGCCTTCCAACACAGTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 686 CTGTGGAGGACTTTGATGTCTCCGATGCCTTCCAACACAGTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCT 759
Query 889 GAGGCCTACATGAGCAAGATCAACATTGCCAAGAGGAGAGCCAACCAGCAGGAAACAGAAATGTTTTATTTTAC 962
|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 760 GAGACCTACATGAGCAAGATCAACATTGCCAAGAGGAGAGCCAACCAGCAGGAAACAGAAATGTTTTATTTTAC 833
Query 963 AAACGGGCCT-----GATGATGT---------TTTCCCCAT-------TTGCCATCCAAG--------ACTC-- 1005
||| .| ||..|||| |..||.||| .|||...||||| ||||
Sbjct 834 AAA-----ATTTAAAGAGTATGTGAATGGCAGTAACCTCATCACCAAGCTGCAGGCCAAGCACGATTTACTCAA 902
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 903 GCAGACCCTGGGCGAAGGGGAAAGAGCAGAATGCGGCACCACCAGCAGAAGAGATGGAAGGCTTAGGCTGCCCC 976
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 977 ACTTTCCTTGGCCGAGCTGCCCCCCTGCTCCCCACTTTGTGCCCCACCCAGCACTTCAAGGAAGAAGAAATGCT 1050
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1051 CGAACCAGGAACCAGGATTCAGGACAAGCTATACCGCTTGTAGTCGAGAGCTGCATCCGTTACATCAATTTATA 1124
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1125 TGGACTCCAGCAGCAGGGGATCTTCAGAGTGCCAGGATCTCAGGTGGAAGTCAATGACATCAAAAATTCCTTTG 1198
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1199 AGAGAGGTGAAGACCCCCTTGTGGACGATCAAAATGAACGAGATATCAATTCAGTCGCTGGTGTTTTAAAACTG 1272
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1273 TATTTCCGAGGACTGGAAAACCCACTCTTTCCTAAGGAAAGGTTTCAAGATTTGATATCTACTATTAAACTGGA 1346
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1347 GAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTGGTCATGA 1420
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1421 GATACCTCTTCGCTTTCCTCAACCACCTCTCCCAGTATAGCGACGAGAACATGATGGATCCCTACAACCTGGCC 1494
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1495 ATCTGCTTCGGGCCTACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACATCAATGA 1568
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1569 AGTCATCAAAACCATCATCATCCATCATGAAGCCATCTTCCCCAGCCCCCGGGAGCTAGAGGGACCTGTGTATG 1642
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1643 AAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCATCGATGAAGTTGAC 1716
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1717 CATGACAATGGCACTGAGCCTCATACCAGCGATGAAGAAGTGGAGCAGATCGAGGCTATTGCCAAGTTTGACTA 1790
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1791 CATGGGGCGGTCCCCGCGTGAGCTATCCTTCAAGAAGGGGGCCTCGCTGCTCCTGTACCACCGCGCCTCGGAGG 1864
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1865 ACTGGTGGGAGGGCCGGCACAACGGCGTGGATGGACTCATCCCCCATCAGTACATAGTTGTACAGGACATGGAT 1938
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1939 GATGCCTTCTCCGACAGCCTGAGCCAGAAGGCTGACAGCGAGGCCAGCAGTGGGCCATTGCTGGATGACAAGGC 2012
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2013 CTCTTCCAAAAACGACCTCCAGTCCCCCACGGAGCACATCTCGGATTACGGCTTTGGGGGGGTGATGGGCCGAG 2086
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2087 TGCGGTTACGATCTGATGGAGCAGCCATCCCCAGACGCCGAAGCGGGGGCGACACACACAGCCCGCCCCGGGGC 2160
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2161 CTGGGCCCCAGCATAGACACACCACCCCGGGCTGCTGCCTGCCCCAGCAGCCCCCACAAAATCCCCCTCACCCG 2234
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2235 GGGGAGGATCGAGAGCCCTGAGAAGCGGAGGATGGCGACGTTCGGGAGCGCTGGCAGCATCAACTACCCTGACA 2308
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2309 AGAAGGCGCTCTCCGAAGGGCACTCGATGAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAGGGGACCAC 2382
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2383 AAGTCCCTGGAGGCCGAGGCCCTGGCAGAAGACATCGAGAAGACCATGAGCACGGCTCTGCACGAGTTGCGGGA 2456
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2457 ACTCGAGAGGCAGAACACGGTCAAGCAGGCGCCAGATGTGGTGCTGGACACCCTGGAGCCCCTGAAGAACCCGC 2530
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2531 CAGGCCCCGTCAGCTCGGAGCCCGCCAGTCCCCTTCACACCATCGTCATCCGCGACCCCGATGCCGCCATGCGC 2604
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2605 CGCAGCAGCAGCTCCTCCACCGAGATGATGACCACCTTCAAGCCAGCCCTGTCCGCCCGCCTGGCTGGCGCCCA 2678
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2679 GCTCCGCCCGCCCCCCATGCGGCCCGTGCGGCCGGTGGTCCAGCACCGGTCCAGCAGCAGCAGCAGCTCGGGCG 2752
Query 1006 ----------------------------------------------------------------------- 1005
Sbjct 2753 TGGGCAGCCCGGCCGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCACCATG 2823
