Nucleotide Global Alignment
Description
- Query:
- TRCN0000467243
- Subject:
- XR_001748939.1
- Aligned Length:
- 3917
- Identities:
- 2331
- Gaps:
- 1585
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GATGCTGTTTGGCGACTCGTCGCCATTCCCGGAGCAGGTCGGCCTCGGCCCAGGGGCGAGTATCCGTTGCTGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGGAGACACTAGTCCCCGACACCGAGACAGCCAGCCCTCTCCCCTGCCTCGCGGCGGGAGAGCGTGTCCGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCGGCCGGCGGGGCTCGCGCAACCTCCCTCGCCTCCCCTTCCCCCGCAGCCTCCGCCCCGCCAGGCCCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGACTCCCGAGCCCCGGCCTCCTCGTCCTCGGTCGCCGCTGCCGCCGGGCTTAACAGCCCCGTCCGCCGCTTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTTCCTAGTTTGAGAAGCCAAGGAAGGAAACAGGGAAAAATGTCGCCATGAAGGCCGAGAACCGCTGCCGCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGACCCCCGCCGGCCCTGAACGCCATGAGCCTGGGTCCCCGCCGCGCCCGCTCCGCTCCGACTGCCGTCGCCG 444
Query 1 ---------------ATGCCGCTGAGCTCCCCCAACGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGG 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCGAGGCCCCCGTTGATGCCGCTGAGCTCCCCCAACGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGG 518
Query 60 CTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGGCGGGGCCAG 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGGCGGGGCCAG 592
Query 134 CCGGCGAGTCTAAACCCAAGAGC--------------------------------------------------- 156
|||||||||||||||||||||||
Sbjct 593 CCGGCGAGTCTAAACCCAAGAGCGAATTACTAATTTCAGCTGGATTCAATTTGTTGTCAGTTGATTCTGTAGTA 666
Query 157 --------------------------------------------------GATGGAAAGAACTCCAGTGGATCC 180
||||||||||||||||||||||||
Sbjct 667 AGGCCATATGTTGCCCCTCTGGAGGTGCTTGTCAACTACTCTGGATGATGGATGGAAAGAACTCCAGTGGATCC 740
Query 181 AAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTCCAG 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTCCAG 814
Query 255 TTCACAGAAAAGCAAGACTTTTAACAAGATGCCTCCTCAAAGGGGCGGCGGCAGCAGCAAACTCTTTAGCTCTT 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTCACAGAAAAGCAAGACTTTTAACAAGATGCCTCCTCAAAGGGGCGGCGGCAGCAGCAAACTCTTTAGCTCTT 888
Query 329 CTTTTAATGGTGGAAGACGAGATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGT 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTTTTAATGGTGGAAGACGAGATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGT 962
Query 403 CCTAAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAGACGGGTCACTTTGAAGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTAAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAGACGGGTCACTTTGAAGG 1036
Query 477 CAGTGGACATGGTAGCTGGGGAAAGAGGAACAAGTGGGGACATAAGCCTTTTAACAAGGAACTCTTTTTACAGG 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAGTGGACATGGTAGCTGGGGAAAGAGGAACAAGTGGGGACATAAGCCTTTTAACAAGGAACTCTTTTTACAGG 1110
Query 551 CCAACTGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTCATTTTGCTGATCCTGATACATTAGTTAAC 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCAACTGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTCATTTTGCTGATCCTGATACATTAGTTAAC 1184
Query 625 TGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTAC 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTAC 1258
Query 699 TGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGA 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGA 1332
Query 773 AGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCACAGAG 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCACAGAG 1406
Query 847 TCACATCAGTATGTTGTTGGTGATACCATTACGATGCAGCTGATGAAGAGGGAGAAAGGGGTGTTGGTGGCTTT 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCACATCAGTATGTTGTTGGTGATACCATTACGATGCAGCTGATGAAGAGGGAGAAAGGGGTGTTGGTGGCTTT 1480
Query 921 GCCCAAATCCAAATGGATGAATGTAGACCATCCCATTCATCTAGGAGATGAACAGCACAGCCAGTACTCCAAGT 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCCCAAATCCAAATGGATGAATGTAGACCATCCCATTCATCTAGGAGATGAACAGCACAGCCAGTACTCCAAGT 1554
Query 995 TTCTGCTGGCCTCTAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGTAGCACTAGAGCAGCAGCTG 1068
|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGCTGCTGGCCTCTAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGTAGCACTAGAGCAGCAGCTG 1628
Query 1069 GCAGAGGAGAAGCACACTCCCGAGTCCTGCTTTATTGAGGCAGCTATCCAGGAGCTCAAGACTCGGGAAGAGGC 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCAGAGGAGAAGCACACTCCCGAGTCCTGCTTTATTGAGGCAGCTATCCAGGAGCTCAAGACTCGGGAAGAGGC 1702
Query 1143 TCTGTCGGGATTGGCCGGAAGCAGAAGGGAGGTCACTGGTGTTGTGGCTGCTCTGGAACAACTGGTGCTGATGG 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCTGTCGGGATTGGCCGGAAGCAGAAGGGAGGTCACTGGTGTTGTGGCTGCTCTGGAACAACTGGTGCTGATGG 1776
Query 1217 CTCCCTTGGCGAAGGAGTCTGTTTTTCAACCCAGGAAGGGTGTGCTGGAGTATCTGTCTGCCTTCGATGAAGAA 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTCCCTTGGCGAAGGAGTCTGTTTTTCAACCCAGGAAGGGTGTGCTGGAGTATCTGTCTGCCTTCGATGAAGAA 1850
Query 1291 ACCACGGAAGTTTGTTCTCTGGACACTCCTTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAGGAAGCAGT 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ACCACGGAAGTTTGTTCTCTGGACACTCCTTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAGGAAGCAGT 1924
Query 1365 GTCTGAACCAGAGCCTGAGGGGTTGCCAGAGGCCTGTGATGACTTGGAGTTAGCAGATGACAATCTTAAAGAGG 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GTCTGAACCAGAGCCTGAGGGGTTGCCAGAGGCCTGTGATGACTTGGAGTTAGCAGATGACAATCTTAAAGAGG 1998
Query 1439 GGACCATTTGCACTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTCTCCT 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GGACCATTTGCACTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTCTCCT 2072
Query 1513 TGTTACTACTTTTACCAAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGTGCG 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGTTACTACTTTTACCAAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGTGCG 2146
Query 1587 GGAGTACGGCAGCCTGGAGAGGAGCCCCGAGAAGATCTCAGCAACTGTGGTGGAGATTGCTGGCTACTCCATGT 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GGAGTACGGCAGCCTGGAGAGGAGCCCCGAGAAGATCTCAGCAACTGTGGTGGAGATTGCTGGCTACTCCATGT 2220
Query 1661 CTGAGGATGTTCGACAGCGTCACAGATATCTCTCTCACTTGCCACTCACCTGTGAGTTCAGCATCTGTGAACTG 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CTGAGGATGTTCGACAGCGTCACAGATATCTCTCTCACTTGCCACTCACCTGTGAGTTCAGCATCTGTGAACTG 2294
Query 1735 GCTTTGCAACCTCCTGTGGTCTCTAAGGAAACCCTAGAGATGTTCTCAGATGACATTGAGAAGAGGAAACGTCA 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GCTTTGCAACCTCCTGTGGTCTCTAAGGAAACCCTAGAGATGTTCTCAGATGACATTGAGAAGAGGAAACGTCA 2368
Query 1809 GCGCCAAAAGAAGGCTCGGGAGGAACGCCGCCGAGAGCGCAGGATTGAGATAGAGGAGAACAAGAAACAGGGCA 1882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GCGCCAAAAGAAGGCTCGGGAGGAACGCCGCCGAGAGCGCAGGATTGAGATAGAGGAGAACAAGAAACAGGGCA 2442
Query 1883 AGTACCCAGAAGTCCACATTCCCCTCGAGAATCTACAGCAGTTTCCTGCCTTCAATTCTTATACCTGCTCCTCT 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 AGTACCCAGAAGTCCACATTCCCCTCGAGAATCTACAGCAGTTTCCTGCCTTCAATTCTTATACCTGCTCCTCT 2516
Query 1957 GATTCTGCTTTGGGTCCCACCAGCACCGAGGGCCATGGGGCCCTCTCCATTTCTCCTCTCAGCAGAAGTCCAGG 2030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GATTCTGCTTTGGGTCCCACCAGCACCGAGGGCCATGGGGCCCTCTCCATTTCTCCTCTCAGCAGAAGTCCAGG 2590
Query 2031 TTCCCATGCAGACTTTCTGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCCTCATTCTGCGTTGGGA 2104
||||||||
Sbjct 2591 TTCCCATG------------------------------------------------------------------ 2598
Query 2105 GTCTGGAAGAAGACTCTCCCTTCCCTTCCTTTGCCCAGATGCTGAGGGTTGGAAAAGCAAAAGCAGATGTGTGG 2178
|||||||||||||||||||||||||||||||||||||||
Sbjct 2599 -----------------------------------CAGATGCTGAGGGTTGGAAAAGCAAAAGCAGATGTGTGG 2637
Query 2179 CCCAAAACTGCTCCAAAGAAAGATGAGAACAGCTTAGTTCCTCCTGCCCCTGTGGACAGCGACGGGGAGAGTGA 2252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2638 CCCAAAACTGCTCCAAAGAAAGATGAGAACAGCTTAGTTCCTCCTGCCCCTGTGGACAGCGACGGGGAGAGTGA 2711
Query 2253 TAATTCAGACCGTGTTCCTGTGCCCAGTTTTCAAAATTCCTTCAGCCAAGCTATTGAAGCAGCCTTCATGAAAC 2326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2712 TAATTCAGACCGTGTTCCTGTGCCCAGTTTTCAAAATTCCTTCAGCCAAGCTATTGAAGCAGCCTTCATGAAAC 2785
Query 2327 TGGACACACCAGCTACTTCAGATCCCCTCTCTGAAGAGAAAGGAGGAAAGAAAAGAAAAAAACAGAAACAGAAG 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2786 TGGACACACCAGCTACTTCAGATCCCCTCTCTGAAGAGAAAGGAGGAAAGAAAAGAAAAAAACAGAAACAGAAG 2859
Query 2401 CTCCTGTTCAGCACCTCAGTCGTCCACACCAAG----------------------------------------- 2433
|||||||||||||||||||||||||||||||||
Sbjct 2860 CTCCTGTTCAGCACCTCAGTCGTCCACACCAAGTGACACTACTGGCCCAGGCTACCTTCTCCATCTGGTTTTTG 2933
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 2934 TTTTTGTTTTTTTTTCCCCCATGCTTTTGTTTGGCTGCTGTAATTTTTAAGTATTTGAGTTTGAACAGATTAGC 3007
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3008 TCTGGGGGGAGGGGGTTTCCACAATGTGAGGGGGAACCAAGAAAATTTTAAATACAGTGTATTTTCCAGCTTCC 3081
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3082 TGTCTTTACACCAAAATAAAGTATTGACACAAGAGATCTCTTCCTGCCAAGGTTTTTAGTTCATTGCCAGTTTA 3155
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3156 GTCTTTTTGACCCATGTGTAATTAATTTTTCTCAACCCAAAGTAAGATTGAGTCCCCTTTGAGATGCATTAGAG 3229
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3230 CAGTCCAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAGTACACCTCT 3303
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3304 CAGTTTGTCTTTTAAAAAACAGCTGAATCTTTACTACCTATTTAGTTCTCCTTGTTAAAGAAACAGGGGTGGGA 3377
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3378 ATAAAATGGATTTAGGACACCCAGTTTGAATTGCAGTTTTTTTTTTTCTGACACATGGCCAGGCTGTGGTGCCA 3451
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3452 GCTTAATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGAGCATGGCTTG 3525
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3526 AGTTGGTAAGGAAAGCTGTAACTCACGAAGCCCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGAC 3599
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3600 TGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCCATCTGAAGCGGTAGCATTGCCA 3673
Query 2434 -------------------------------------------------------------------------- 2433
Sbjct 3674 CCATCTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATGTGAATTCTTTTGCTGC 3747
Query 2434 --------------------------------------------------------------------- 2433
Sbjct 3748 TTAATAAAGTGACCTCTAGGTGCATTAGAATGCGAAGGCAAATAGTTGCAATAAATCACCTGCACAAGC 3816
