Nucleotide Global Alignment
Description
- Query:
- TRCN0000467342
- Subject:
- XR_376325.2
- Aligned Length:
- 3381
- Identities:
- 419
- Gaps:
- 2907
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGCCTGCCACCGCCTCCTGGGCGGGAGCTTCCTGTGGCTGTCTCCGCCGCGGCCGCCCGGGGGCCGCGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCTAGGCGGTTCCGGGCTCGAGAAGGCCCGGTTTTGGTTCGGATCCGCCGCGAGGTATCTAGCCTGCCAAGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCAGGGCCAAGACCTCGGAAGGGCCCTAAGACCAGTGGCCAGGGTGCTGAGACTGCCAAGCAGCTGGGGCTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGTGGAGTTCAACCCTGAGGACATGCTCCTGGGGGTGGATGAGACTGAAGATGATGGAGACCTGGAGGCTGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTACTGGCACTCACAGGGGAAACAGCGAGCAGGAGCAGGAAGCCAGCACCCAAGGGGCAGGCTCCACTGCCCAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCCCACATTGAGAAGCTGGCAGCAGACTGTATGCGAGATGTGGAGGAGGATGAAGAAGAGGAAGGGCTGGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACGATGCAGACCTTCTGACAGAGCTGCAGGAGGTCCTGGGTGAGGATGAAGAAGCGGGTCTGCTGGACGGCAGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGGCAGCAAGTCCAGACCTCTGTGAGGAGAAGACTTGGGACAACACTGAACTACCTGTAGAGCAGGCAGCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAACAGGCAGTACCTGCTGCAGCTCAGGCTGGAGGGCCTCGGGGGCTGCAGGCTTTGCTGGAGGAACGGATCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTAACTACCGGGAGGCCGCAGCCAGTGCCAAGGAGGCTGGTGAAGCTGCCAAAGCCCGGCGCTGTGAGCGAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTAAAGACTCTGCAGTCCCAGCTTGCCACTGTGAGGAAAGGCGGGAAGATCTGTGAGGATGAGATCCCACCTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTAGCCTTGGGCAAAAGGCCCCCAGCCCCCCAGGAAAGAGCCATCAAGAACCCTGAGATAGACTCTCCAGGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGTGCCATGGAGCCAGGCAACCTTTCCCAGCCCGAGTCCAGCCTCCCTGCCATTGCTCCCTTGCCTGATTCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACCCAGACCCACAAGCCCTGCTGTTAGCCCGACAGAGAGAGTACAAGGCGGCTGCTCTCGATGCCAAGCGGGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGAGATCTAGACCGTGCTCGGGAGCTCATGAGGATCGGGAAGAGATTTGGTACTGTCCTAGAGGCCCTGGAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGGTCAGCCTGTGGACCTGAGTGGCATGCCCCCAGCACCTGCGGATCTGAAGGCCCTCCCCCAGGCTTCTAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCTCCTCAGCAACCCAAGGCCTGTCCCCAGCAGTAGAGCAAATGCAGCCAGTGATGGCCTCTGACCTCCCAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACCCCAGTGGCCCCTGCGGAGCCAACAACAGTGCTGGATGCTTTACAGCAAAGGCTGAACAAGTATCGTGAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGGCATCCAGGCCCGGGCCAATGGGGATGAGCGCAAGGCCAGGATGCACGATCGCATTGCCAAGCAATATCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GATGCTGTTCGAGCTCATCAGGCAGGACAGAAAGTTGACTTTGCCGAGTTACCTGTTCCTCCAGGATTTCCTCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATCCCTGGCCTGGAGCCCAGGAAAGGTAGTGAGCAGGATTCAGTGGCAGCAACTTTAGCAACTGCCCAAAAAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGGCCTCAGAAGATGCAGCCCTGGTAGATGACGACGAGGAGAGTGACACTCCAGCACAGGCCCCATTGGCCAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAGCCAGCGCAGACTCTGGTCTCTCCATCCCATCTTCTGACTGAGCCCAAGGCTTCAAGTTCTAAGGAGTCACT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAGTCCATCTGTTCGGGAGCAGGTGACACTGCTGGAGGCTCGGAAACTGCAATACCAGCGAGCAGCTCTGCAAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCAAGCGCAGGCAGGATCTTGAGCAGGCCAAATCCCACTTACGAGTAGCTAAAAGTCTTGAGGCTCAGATCATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAGGCCCGAGCTGGTCAACCCATTGATCTCTCCAAGGTGCCTTCACCGTTGACAGATGAAGAGGGGGACTTCAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTCATTCACCATGAGGATCTGCGACTCTCCCAGAAGGCTGAGGAGGTGTATGCCCAGCTACAGAAAATGCTCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGGAGCAGCAAGCGAAGTGCCTGCTATTCTCCAAGCAGTACATGCACCAGGGAAATGTGGCTGAGACCACTCGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTGAGAGGCTTGCGGAGGACCGAAAGAAACAGCTTGAGATCCTGCAGCTAGCCCAAGCCCAGGGCCTTGACCC 2146
Query 1 ----------------------------------------------------------------------ATGC 4
||||
Sbjct 2147 TCCTAGTCATCACTTTGAGCTGAAGACATTCCAGACTGTGAGGATCTTCTCAGAACTCAACAGCACAGAAATGC 2220
Query 5 ATCTGATCATTGTCCGGGGAATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGATGACCTGGATGCTTTTG-- 76
||||||||||.||.|||||||||||||||||||||||.|||||.||||||||.||||||.||||||||||||
Sbjct 2221 ATCTGATCATCGTGCGGGGAATGAACCTCCCAGCCCCGCCAGGAGTGACTCCGGATGACTTGGATGCTTTTGCA 2294
Query 77 -------------------------------------TGCGGTTTGAGTTTC---------------------- 91
|.|.|.|||||||.|
Sbjct 2295 CTGCCACAGGGAGGGGCTGAAGACCCTCTGGCCCATTTCCTGCTTGAGTTGCTTTCTGCACTTTTGACTCAGCC 2368
Query 92 --------------------------------------ACTACCCT-AACTC---------GGACCAGGCTCAA 117
|||.|.|| |.||| |||||||||||||
Sbjct 2369 AAAGTGTTGTGCTTAAACACATGGTTTTTGAGCTCTCAACTTCTCTCATCTCTCTGCTATAGGACCAGGCTCAA 2442
Query 118 AAAAGCAAAACAGCTGTGGTGAAGAACACAAACTCTCCAGAATTTGATCAACTCTTCAAACTAAACATCAACCG 191
||||||||||||||||||||.||.||.||.||.||||||||||||||.|||.|.|||||.|||||||||||.||
Sbjct 2443 AAAAGCAAAACAGCTGTGGTAAAAAATACCAATTCTCCAGAATTTGAACAAGTTTTCAAGCTAAACATCAATCG 2516
Query 192 AAACCACCGGGGCTTCAAGAGGGTGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCT 265
|||||||||.|||||.|.|||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.|
Sbjct 2517 AAACCACCGAGGCTTTAGGAGAGTGATCCAGAGCAAAGGAATCAAATTTGAGATCTTCCACAAAGGATCCTTTT 2590
Query 266 TCAGAAGCGACAAGCTGGTTGGCACAGCACACCTGAAACTGGAGCGGCTGGAGAATGAGTGTGAGATCAGAGAA 339
|.|||||.||||||||||||||||||||||||.|||||.||||..||||||||||.|||||||||||||||||.
Sbjct 2591 TTAGAAGTGACAAGCTGGTTGGCACAGCACACTTGAAATTGGAAAGGCTGGAGAAGGAGTGTGAGATCAGAGAG 2664
Query 340 ATTGTGGAGGTCCTGGATGGAAGGAAGCCCACCGGGGGGAAGCTGGAGGTGAAGGTGAGGCTGCGGGAGCCTCT 413
||..|||||||..|||||||.||.||||||||.|||||||||||||||||||||||||||||.|||||||||||
Sbjct 2665 ATCATGGAGGTTTTGGATGGCAGAAAGCCCACTGGGGGGAAGCTGGAGGTGAAGGTGAGGCTTCGGGAGCCTCT 2738
Query 414 GAGTGGCCAGGATGTGCAGATGGTCACTGAGAACTGGCTGGTTCTGGAGCCCAGGGGCTTG------------- 474
|||..|||||||.|||||||.|||||||||||||||||||||.||||||||..|||||.||
Sbjct 2739 GAGCAGCCAGGACGTGCAGACGGTCACTGAGAACTGGCTGGTCCTGGAGCCTCGGGGCCTGTGAAGAGGTGGAC 2812
Query 475 -------------------------------------------------------------------------- 474
Sbjct 2813 ATCCTTGGTAACAGCTCACTGACCCAGCTGTGCCGGCTCAAGAGCCGTTGTACATCAGAGATGCTGCTACACAC 2886
Query 475 -------------------------------------------------------------------------- 474
Sbjct 2887 GCACCAAAGACCTGATAACTAACAGTGGCCTGGGCTTTCCTCCTGCTGCCTCTCCTGGACCTTCGTGGAAGCAG 2960
Query 475 -------------------------------------------------------------------------- 474
Sbjct 2961 GCCTCCCACCCTCCCTGTGGGCGAAGACAAGGATACCCCACTGCTCTGTGCCACAGAGTCCCGTAACCGCTGCA 3034
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3035 TAGTAATTGCGTACCGCTTAACCCAGCCCCCATTTGCACCATTTCTGGATGTGCCTTTCAAAGATGTAACTGTA 3108
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3109 GGGATGGGAGAACTCGAGGGTGATCGGAACATCCCGTGTGGGGAGGGACAGGATTCCGTGACTCCAGCTGGCCA 3182
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3183 GCGGCAGACTGTCCCGCTCAGCTGTTTTCCCTCTGCCTGTGCCTTTGTTCCTGACAGCTGCTGCACTAGCCTTT 3256
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3257 CTGCTTCCCAGAGGACTCGGGAACAGGAACGTTACTTTGGTACTATTGGTGGGAAGTAAGGGAAGGTTCTCTTT 3330
Query 475 --------------------------------------------------- 474
Sbjct 3331 GGTTTGGTCCATGTACCTAAGGTGAAAGACTGTTAATTGGGGAGAAAAAAA 3381
