Nucleotide Global Alignment
Description
- Query:
- TRCN0000467342
- Subject:
- XR_376326.1
- Aligned Length:
- 3389
- Identities:
- 425
- Gaps:
- 2915
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGCCTGCCACCGCCTCCTGGGCGGGAGCTTCCTGTGGCTGTCTCCGCCGCGGCCGCCCGGGGGCCGCGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCTAGGCGGTTCCGGGCTCGAGAAGGCCCGGTTTTGGTTCGGATCCGCCGCGAGGTATCTAGCCTGCCAAGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCAGGGCCAAGACCTCGGAAGGGCCCTAAGACCAGTGGCCAGGGTGCTGAGACTGCCAAGCAGCTGGGGCTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGTGGAGTTCAACCCTGAGGACATGCTCCTGGGGGTGGATGAGACTGAAGATGATGGAGACCTGGAGGCTGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTACTGGCACTCACAGGGGAAACAGCGAGCAGGAGCAGGAAGCCAGCACCCAAGGGGCAGGCTCCACTGCCCAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCCCACATTGAGAAGCTGGCAGCAGACTGTATGCGAGATGTGGAGGAGGATGAAGAAGAGGAAGGGCTGGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACGATGCAGACCTTCTGACAGAGCTGCAGGAGGTCCTGGGTGAGGATGAAGAAGCGGGTCTGCTGGACGGCAGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGGCAGCAAGTCCAGACCTCTGTGAGGAGAAGACTTGGGACAACACTGAACTACCTGTAGAGCAGGCAGCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAACAGGCAGTACCTGCTGCAGCTCAGGCTGGAGGGCCTCGGGGGCTGCAGGCTTTGCTGGAGGAACGGATCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTAACTACCGGGAGGCCGCAGCCAGTGCCAAGGAGGCTGGTGAAGCTGCCAAAGCCCGGCGCTGTGAGCGAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTAAAGACTCTGCAGTCCCAGCTTGCCACTGTGAGGAAAGGCGGGAAGATCTGTGAGGATGAGATCCCACCTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTAGCCTTGGGCAAAAGGCCCCCAGCCCCCCAGGAAAGAGCCATCAAGAACCCTGAGATAGACTCTCCAGGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGTGCCATGGAGCCAGGCAACCTTTCCCAGCCCGAGTCCAGCCTCCCTGCCATTGCTCCCTTGCCTGATTCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACCCAGACCCACAAGCCCTGCTGTTAGCCCGACAGAGAGAGTACAAGGCGGCTGCTCTCGATGCCAAGCGGGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGAGATCTAGACCGTGCTCGGGAGCTCATGAGGATCGGGAAGAGATTTGGTACTGTCCTAGAGGCCCTGGAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGGTCAGCCTGTGGACCTGAGTGGCATGCCCCCAGCACCTGCGGATCTGAAGGCCCTCCCCCAGGCTTCTAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCTCCTCAGCAACCCAAGGCCTGTCCCCAGCAGTAGAGCAAATGCAGCCAGTGATGGCCTCTGACCTCCCAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACCCCAGTGGCCCCTGCGGAGCCAACAACAGTGCTGGATGCTTTACAGCAAAGGCTGAACAAGTATCGTGAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGGCATCCAGGCCCGGGCCAATGGGGATGAGCGCAAGGCCAGGATGCACGATCGCATTGCCAAGCAATATCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GATGCTGTTCGAGCTCATCAGGCAGGACAGAAAGTTGACTTTGCCGAGTTACCTGTTCCTCCAGGATTTCCTCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATCCCTGGCCTGGAGCCCAGGAAAGGTAGTGAGCAGGATTCAGTGGCAGCAACTTTAGCAACTGCCCAAAAAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGGCCTCAGAAGATGCAGCCCTGGTAGATGACGACGAGGAGAGTGACACTCCAGCACAGGCCCCATTGGCCAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAGCCAGCGCAGACTCTGGTCTCTCCATCCCATCTTCTGACTGAGCCCAAGGCTTCAAGTTCTAAGGAGTCACT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAGTCCATCTGTTCGGGAGCAGGTGACACTGCTGGAGGCTCGGAAACTGCAATACCAGCGAGCAGCTCTGCAAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCAAGCGCAGGCAGGATCTTGAGCAGGCCAAATCCCACTTACGAGTAGCTAAAAGTCTTGAGGCTCAGATCATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAGGCCCGAGCTGGTCAACCCATTGATCTCTCCAAGGTAACATGGCAGGGCCAGTCTAGTAGAAACAGTGCCAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGATAGAATGGGAGGCAGTGAGTGTCATTGGAGGGGCCTTATGATCTGGGCAGGTGCCTTCACCGTTGACAGAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAAGAGGGGGACTTCATCCTCATTCACCATGAGGATCTGCGACTCTCCCAGAAGGCTGAGGAGGTGTATGCCCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCTACAGAAAATGCTCCAGGAGCAGCAAGCGAAGTGCCTGCTATTCTCCAAGCAGTACATGCACCAGGGAAATG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGGCTGAGACCACTCGGTTTGAGAGGCTTGCGGAGGACCGAAAGAAACAGCTTGAGATCCTGCAGCTAGCCCAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCCCAGGGCCTTGACCCTCCTAGTCATCACTTTGAGCTGAAGACATTCCAGACTGTGAGGATCTTCTCAGAACT 2294
Query 1 -------------ATGCATCTGATCATTGTCCGGGGAATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGATG 61
||||||||||||||.||.|||||||||||||||||||||||.|||||.||||||||.||||
Sbjct 2295 CAACAGCACAGAAATGCATCTGATCATCGTGCGGGGAATGAACCTCCCAGCCCCGCCAGGAGTGACTCCGGATG 2368
Query 62 ACCTGGATGCTTTTGTGCGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCTGTG 135
||.|||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ACTTGGATGCTTTTGTACGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCTGTG 2442
Query 136 GTGAAGAACACAAACTCTCCAGAATTTGATCAACTCTTCAAACTAAACATCAACCGAAACCACCGGGGCTTCAA 209
||.||.||.||.||.||||||||||||||.|||.|.|||||.|||||||||||.|||||||||||.|||||.|.
Sbjct 2443 GTAAAAAATACCAATTCTCCAGAATTTGAACAAGTTTTCAAGCTAAACATCAATCGAAACCACCGAGGCTTTAG 2516
Query 210 GAGGGTGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAGAAGCGACAAGCTGG 283
|||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.||.|||||.||||||||||
Sbjct 2517 GAGAGTGATCCAGAGCAAAGGAATCAAATTTGAGATCTTCCACAAAGGATCCTTTTTTAGAAGTGACAAGCTGG 2590
Query 284 TTGGCACAGCACACCTGAAACTGGAGCGGCTGGAGAATGAGTGTGAGATCAGAGAAATTGTGGAGGTCCTGGAT 357
||||||||||||||.|||||.||||..||||||||||.|||||||||||||||||.||..|||||||..|||||
Sbjct 2591 TTGGCACAGCACACTTGAAATTGGAAAGGCTGGAGAAGGAGTGTGAGATCAGAGAGATCATGGAGGTTTTGGAT 2664
Query 358 GGAAGGAAGCCCACCGGGGGGAAGCTGGAGGTGAAGGTGAGGCTGCGGGAGCCTCTGAGTGGCCAGGATGTGCA 431
||.||.||||||||.|||||||||||||||||||||||||||||.||||||||||||||..|||||||.|||||
Sbjct 2665 GGCAGAAAGCCCACTGGGGGGAAGCTGGAGGTGAAGGTGAGGCTTCGGGAGCCTCTGAGCAGCCAGGACGTGCA 2738
Query 432 GATGGTCACTGAGAACTGGCTGGTTCTGGAGCCCAGGGGCTTG------------------------------- 474
||.|||||||||||||||||||||.||||||||..|||||.||
Sbjct 2739 GACGGTCACTGAGAACTGGCTGGTCCTGGAGCCTCGGGGCCTGTGAAGAGGTGGACATCCTTGGTAACAGCTCA 2812
Query 475 -------------------------------------------------------------------------- 474
Sbjct 2813 CTGACCCAGCTGTGCCGGCTCAAGAGCCGTTGTACATCAGAGATGCTGCTACACACGCACCAAAGACCTGATAA 2886
Query 475 -------------------------------------------------------------------------- 474
Sbjct 2887 CTAACAGTGGCCTGGGCTTTCCTCCTGCTGCCTCTCCTGGACCTTCGTGGAAGCAGGCCTCCCACCCTCCCTGT 2960
Query 475 -------------------------------------------------------------------------- 474
Sbjct 2961 GGGCGAAGACAAGGATACCCCACTGCTCTGTGCCACAGAGTCCCGTAACCGCTGCATAGTAATTGCGTACCGCT 3034
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3035 TAACCCAGCCCCCATTTGCACCATTTCTGGATGTGCCTTTCAAAGATGTAACTGTAGGGATGGGAGAACTCGAG 3108
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3109 GGTGATCGGAACATCCCGTGTGGGGAGGGACAGGATTCCGTGACTCCAGCTGGCCAGCGGCAGACTGTCCCGCT 3182
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3183 CAGCTGTTTTCCCTCTGCCTGTGCCTTTGTTCCTGACAGCTGCTGCACTAGCCTTTCTGCTTCCCAGAGGACTC 3256
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3257 GGGAACAGGAACGTTACTTTGGTACTATTGGTGGGAAGTAAGGGAAGGTTCTCTTTGGTTTGGTCCATGTACCT 3330
Query 475 ----------------------------------------------------------- 474
Sbjct 3331 AAGGTGAAAGACTGTTAATTGGGGAGAAAAAAAGGAAAAAAGAAAAAGAAAAACTATCA 3389
