Nucleotide Global Alignment
Description
- Query:
- TRCN0000467342
- Subject:
- XR_376327.1
- Aligned Length:
- 3318
- Identities:
- 425
- Gaps:
- 2844
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGCCTGCCACCGCCTCCTGGGCGGGAGCTTCCTGTGGCTGTCTCCGCCGCGGCCGCCCGGGGGCCGCGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCTAGGCGGTTCCGGGCTCGAGAAGGCCCGGTTTTGGTTCGGATCCGCCGCGAGGTATCTAGCCTGCCAAGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCAGGGCCAAGACCTCGGAAGGGCCCTAAGACCAGTGGCCAGGGTGCTGAGACTGCCAAGCAGCTGGGGCTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGTGGAGTTCAACCCTGAGGACATGCTCCTGGGGGTGGATGAGACTGAAGATGATGGAGACCTGGAGGCTGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTACTGGCACTCACAGGGGAAACAGCGAGCAGGAGCAGGAAGCCAGCACCCAAGGGGCAGGCTCCACTGCCCAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCCCACATTGAGAAGCTGGCAGCAGACTGTATGCGAGATGTGGAGGAGGATGAAGAAGAGGAAGGGCTGGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACGATGCAGACCTTCTGACAGAGCTGCAGGAGGTCCTGGGTGAGGATGAAGAAGCGGGTCTGCTGGACGGCAGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGGCAGCAAGTCCAGACCTCTGTGAGGAGAAGACTTGGGACAACACTGAACTACCTGTAGAGCAGGCAGCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAACAGGCAGTACCTGCTGCAGCTCAGGCTGGAGGGCCTCGGGGGCTGCAGGCTTTGCTGGAGGAACGGATCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTAACTACCGGGAGGCCGCAGCCAGTGCCAAGGAGGCTGGTGAAGCTGCCAAAGCCCGGCGCTGTGAGCGAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTAAAGACTCTGCAGTCCCAGCTTGCCACTGTGAGGAAAGGCGGGAAGATCTGTGAGGATGAGATCCCACCTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTAGCCTTGGGCAAAAGGCCCCCAGCCCCCCAGGAAAGAGCCATCAAGAACCCTGAGATAGACTCTCCAGGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGTGCCATGGAGCCAGGCAACCTTTCCCAGCCCGAGTCCAGCCTCCCTGCCATTGCTCCCTTGCCTGATTCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACCCAGACCCACAAGCCCTGCTGTTAGCCCGACAGAGAGAGTACAAGGCGGCTGCTCTCGATGCCAAGCGGGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGAGATCTAGACCGTGCTCGGGAGCTCATGAGGATCGGGAAGAGATTTGGTACTGTCCTAGAGGCCCTGGAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGGTCAGCCTGTGGACCTGAGTGGCATGCCCCCAGCACCTGCGGATCTGAAGGCCCTCCCCCAGGCTTCTAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCTCCTCAGCAACCCAAGGCCTGTCCCCAGCAGTAGAGCAAATGCAGCCAGTGATGGCCTCTGACCTCCCAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACCCCAGTGGCCCCTGCGGAGCCAACAACAGTGCTGGATGCTTTACAGCAAAGGCTGAACAAGTATCGTGAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGGCATCCAGGCCCGGGCCAATGGGGATGAGCGCAAGGCCAGGATGCACGATCGCATTGCCAAGCAATATCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GATGCTGTTCGAGCTCATCAGGCAGGACAGAAAGTTGACTTTGCCGAGTTACCTGTTCCTCCAGGATTTCCTCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATCCCTGGCCTGGAGCCCAGGAAAGGTAGTGAGCAGGATTCAGTGGCAGCAACTTTAGCAACTGCCCAAAAAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGGCCTCAGAAGATGCAGCCCTGGTAGATGACGACGAGGAGAGTGACACTCCAGCACAGGCCCCATTGGCCAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAGCCAGCGCAGACTCTGGTCTCTCCATCCCATCTTCTGACTGAGCCCAAGGCTTCAAGTTCTAAGGAGTCACT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAGTCCATCTGTTCGGGAGCAGGTGACACTGCTGGAGGCTCGGAAACTGCAATACCAGCGAGCAGCTCTGCAAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCAAGCGCAGGCAGGATCTTGAGCAGGCCAAATCCCACTTACGAGTAGCTAAAAGTCTTGAGGCTCAGATCATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAGGCCCGAGCTGGTCAACCCATTGATCTCTCCAAGGGGCCTTATGATCTGGGCAGGTGCCTTCACCGTTGACA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GATGAAGAGGGGGACTTCATCCTCATTCACCATGAGGATCTGCGACTCTCCCAGAAGGCTGAGGAGGTGTATGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCAGCTACAGAAAATGCTCCAGGAGCAGCAAGCGAAGTGCCTGCTATTCTCCAAGCAGTACATGCACCAGGGAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATGTGGCTGAGACCACTCGGTTTGAGAGGCTTGCGGAGGACCGAAAGAAACAGCTTGAGATCCTGCAGCTAGCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAAGCCCAGGGCCTTGACCCTCCTAGTCATCACTTTGAGCTGAAGACATTCCAGACTGTGAGGATCTTCTCAGA 2220
Query 1 ----------------ATGCATCTGATCATTGTCCGGGGAATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCG 58
||||||||||||||.||.|||||||||||||||||||||||.|||||.||||||||.|
Sbjct 2221 ACTCAACAGCACAGAAATGCATCTGATCATCGTGCGGGGAATGAACCTCCCAGCCCCGCCAGGAGTGACTCCGG 2294
Query 59 ATGACCTGGATGCTTTTGTGCGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCT 132
|||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 ATGACTTGGATGCTTTTGTACGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCT 2368
Query 133 GTGGTGAAGAACACAAACTCTCCAGAATTTGATCAACTCTTCAAACTAAACATCAACCGAAACCACCGGGGCTT 206
|||||.||.||.||.||.||||||||||||||.|||.|.|||||.|||||||||||.|||||||||||.|||||
Sbjct 2369 GTGGTAAAAAATACCAATTCTCCAGAATTTGAACAAGTTTTCAAGCTAAACATCAATCGAAACCACCGAGGCTT 2442
Query 207 CAAGAGGGTGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAGAAGCGACAAGC 280
.|.|||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.||.|||||.|||||||
Sbjct 2443 TAGGAGAGTGATCCAGAGCAAAGGAATCAAATTTGAGATCTTCCACAAAGGATCCTTTTTTAGAAGTGACAAGC 2516
Query 281 TGGTTGGCACAGCACACCTGAAACTGGAGCGGCTGGAGAATGAGTGTGAGATCAGAGAAATTGTGGAGGTCCTG 354
|||||||||||||||||.|||||.||||..||||||||||.|||||||||||||||||.||..|||||||..||
Sbjct 2517 TGGTTGGCACAGCACACTTGAAATTGGAAAGGCTGGAGAAGGAGTGTGAGATCAGAGAGATCATGGAGGTTTTG 2590
Query 355 GATGGAAGGAAGCCCACCGGGGGGAAGCTGGAGGTGAAGGTGAGGCTGCGGGAGCCTCTGAGTGGCCAGGATGT 428
|||||.||.||||||||.|||||||||||||||||||||||||||||.||||||||||||||..|||||||.||
Sbjct 2591 GATGGCAGAAAGCCCACTGGGGGGAAGCTGGAGGTGAAGGTGAGGCTTCGGGAGCCTCTGAGCAGCCAGGACGT 2664
Query 429 GCAGATGGTCACTGAGAACTGGCTGGTTCTGGAGCCCAGGGGCTTG---------------------------- 474
|||||.|||||||||||||||||||||.||||||||..|||||.||
Sbjct 2665 GCAGACGGTCACTGAGAACTGGCTGGTCCTGGAGCCTCGGGGCCTGTGAAGAGGTGGACATCCTTGGTAACAGC 2738
Query 475 -------------------------------------------------------------------------- 474
Sbjct 2739 TCACTGACCCAGCTGTGCCGGCTCAAGAGCCGTTGTACATCAGAGATGCTGCTACACACGCACCAAAGACCTGA 2812
Query 475 -------------------------------------------------------------------------- 474
Sbjct 2813 TAACTAACAGTGGCCTGGGCTTTCCTCCTGCTGCCTCTCCTGGACCTTCGTGGAAGCAGGCCTCCCACCCTCCC 2886
Query 475 -------------------------------------------------------------------------- 474
Sbjct 2887 TGTGGGCGAAGACAAGGATACCCCACTGCTCTGTGCCACAGAGTCCCGTAACCGCTGCATAGTAATTGCGTACC 2960
Query 475 -------------------------------------------------------------------------- 474
Sbjct 2961 GCTTAACCCAGCCCCCATTTGCACCATTTCTGGATGTGCCTTTCAAAGATGTAACTGTAGGGATGGGAGAACTC 3034
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3035 GAGGGTGATCGGAACATCCCGTGTGGGGAGGGACAGGATTCCGTGACTCCAGCTGGCCAGCGGCAGACTGTCCC 3108
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3109 GCTCAGCTGTTTTCCCTCTGCCTGTGCCTTTGTTCCTGACAGCTGCTGCACTAGCCTTTCTGCTTCCCAGAGGA 3182
Query 475 -------------------------------------------------------------------------- 474
Sbjct 3183 CTCGGGAACAGGAACGTTACTTTGGTACTATTGGTGGGAAGTAAGGGAAGGTTCTCTTTGGTTTGGTCCATGTA 3256
Query 475 -------------------------------------------------------------- 474
Sbjct 3257 CCTAAGGTGAAAGACTGTTAATTGGGGAGAAAAAAAGGAAAAAAGAAAAAGAAAAACTATCA 3318
