Nucleotide Global Alignment

Description

Query:
TRCN0000467398
Subject:
NR_132310.1
Aligned Length:
5328
Identities:
684
Gaps:
4552

Alignment

Query    1  --------------------------ATGGCCTCCTTGGAAGTCAGTCGTAGTCCTCGCAG-GTCTCGGCGGGA  47
                                      |||||.|||..||..|..|||||.||| ||.||.| |||||.||||..
Sbjct    1  CTTCCGGCGCCTCTCGCAGAGCCGTCATGGCTTCCACGGGGGCGAGTCGCAGT-CTTGCTGCGTCTCCGCGGCC  73

Query   48  GCTGGAAGTGCGCAGTC--CACGACAGAACAAATATTCGGTGCTTTTACCTACCTACAACGAGCGCGAGAACCT  119
            ||.|.|.|..|||  ||  |.||||||.||||.||.||||||||.||.||.|||||||||||.||.||||||||
Sbjct   74  GCCGCAGGGCCGC--TCCTCGCGACAGGACAAGTACTCGGTGCTGTTGCCCACCTACAACGAACGGGAGAACCT  145

Query  120  GCCGCTCATCGTGTGGCTGCTGGTGAAAAGCTTCTCCGAGAGTGGAATCAACTATGAAATTATAATCATAGATG  193
            |||||||||||||||||||||||||||.||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  146  GCCGCTCATCGTGTGGCTGCTGGTGAAGAGCTTCTCCGAGAGTGCAATCAACTATGAAATTATAATCATAGATG  219

Query  194  ATGGAAGCCCAGATGGAACAAGGGATGTTGCTGAACAGTTGG-AGAAGATCTATGGGTCAGACAGAATTCTTCT  266
            |||||||||||||.||.|||||.||.|||||||||||..||| || |||||||||||.|.|||||||||||.||
Sbjct  220  ATGGAAGCCCAGACGGGACAAGAGAAGTTGCTGAACAACTGGCAG-AGATCTATGGGCCCGACAGAATTCTCCT  292

Query  267  AAGACCACGAGAGAAAAAGTTGGGACTAGGAACTGCATATATTCATGGAATGAAACATGCCACAGGAAACTACA  340
            |||||||||||||||||||.||||.||.||||||||.||.|||||||||||.|||||.|||||.||.|||||..
Sbjct  293  AAGACCACGAGAGAAAAAGCTGGGTCTCGGAACTGCCTACATTCATGGAATCAAACACGCCACGGGGAACTATG  366

Query  341  TCATTATTATGGATGCTGATCTCTCACACCATCCAAAATTTATTCCTGAATTTATTAGGAAGCAAAAGGAGGGT  414
            |.||.||.|||||||||||.|||||.||||||||.||||||||||||||||||||.|||||.||||||||||||
Sbjct  367  TGATCATCATGGATGCTGACCTCTCCCACCATCCCAAATTTATTCCTGAATTTATCAGGAAACAAAAGGAGGGT  440

Query  415  AATTTTGATATTGTCTCTGGAACTCGCTACAAAGGAAATGGAGGTGTATATGGCTGGGATTTGAAAAGAAAAAT  488
            ||||||||||||||||||||||||||.|||||.||.|||||.|||||.|||||.|||||||||||||||||.||
Sbjct  441  AATTTTGATATTGTCTCTGGAACTCGATACAAGGGGAATGGGGGTGTTTATGGATGGGATTTGAAAAGAAAGAT  514

Query  489  AATCAGCCGTGGGGCCAATTTTTTAACTCAGATCTTGCTGAGACCAGGAGCATCTGATTTAACAGGAAGTTTCA  562
            ||||||||||||||||||||||.|||||||.||..||||||||||.|||||.||.||.|||||||||||.||||
Sbjct  515  AATCAGCCGTGGGGCCAATTTTATAACTCAAATTCTGCTGAGACCTGGAGCGTCAGACTTAACAGGAAGCTTCA  588

Query  563  GATTATACCGAAAAGAAGTTCTAGAGAAATTAATAGAAAAATGTGTTTCTAAAGGCTACGTCTTCCAGATGGAG  636
            |||||||||||||||||||||||.||||||||||||||||||||||.||.||||||||.|||||.||||||||.
Sbjct  589  GATTATACCGAAAAGAAGTTCTACAGAAATTAATAGAAAAATGTGTCTCCAAAGGCTATGTCTTTCAGATGGAA  662

Query  637  ATGATTGTTCGGGCAAGACAGTTGAATTATACTATTGGCGAGGTTCCAATATCATTTGTGGATCGTGTTTATGG  710
            |||||||||||.|||||||||.|||||||.||||||||.|||||||||||.||||||||||||||.||||||||
Sbjct  663  ATGATTGTTCGAGCAAGACAGATGAATTACACTATTGGTGAGGTTCCAATTTCATTTGTGGATCGAGTTTATGG  736

Query  711  TGAATCCAAGTTGGGAGGAAATGAAATAGTATCTTTCTTGAAAGGATTATTGACTCTTTTTGCTACTATA----  780
            ||||||||||||||||||||||||||||||.||.|||.|||||||.|||||||||||.||||||||.|.|    
Sbjct  737  TGAATCCAAGTTGGGAGGAAATGAAATAGTCTCGTTCCTGAAAGGGTTATTGACTCTCTTTGCTACCACATAAA  810

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct  811  AGAAATGATTCACTTATGCTTCCCGTGTTCATTTCAATTAAAAGTAGAGAAGCCCGGGTCACTGATTTTTATCA  884

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct  885  ATGTTGTCTTAACACATGAGCCAAAGAAACTATGTTCCAACTTCCTGTCAACAATCTTGGCAGTTTAAGAAAAG  958

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct  959  CCCGGAAAACTGTGAAAAAAATACTTAGTGACATTGGGTTGGAATACTGTAAAGAACATATAGAAGATTTTAAA  1032

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1033  CAGTTTGAACCTAATGACTTTTATTTGAAAAACACTACATGGGAGGATGTAGGACTGTGGGACCCTTCTCTTAC  1106

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1107  GAAAAATCAGGACTATCGGACAAAACCTTTTTGCTGCAGTGCTTGTCCGTTTTCCTCAAAATTCTTCTCTGCCT  1180

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1181  ACAAAAGTCATTTCCGGAATGTCCATAGTGAAGACTTTGAAAATAGGATTCTCCTTAACTGCCCTTACTGTACC  1254

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1255  TTCAATGCAGATAAAAAGACTTTGGAAACACACATTAAAATATTTCATGCTCCAAACTCCAGCGCACCAAGTAG  1328

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1329  CAGCCTCAGCACTTTCAAAGATAAAAACAAAAACGATGGCCTTAAACCTAAGCAGGCTGACAATGTAGAGCAAG  1402

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1403  CCGTGTATTACTGCAAGAAGTGCACTTACCGAGACCCTCTCTACGAGATCGTCAGGAAGCACATCTACAGGGAA  1476

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1477  CATTTTCAACACGTGGCAGCACCCTACATAGCAAAAGCAGGAGAAAAATCACTCAATGGTGCAGTCTCCCTGGG  1550

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1551  CACAAATGCCCGAGAGGAGTGTAACATCCACTGCAAGCGATGCCTTTTCATGCCCAAGTCCTATGAAGCTTTGG  1624

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1625  TACAGCATGTCATTGAGGACCATGAACGGATAGGCTATCAGGTCACTGCCATGATCGGACACACAAATGTTGTA  1698

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1699  GTTCCCCGAGCCAAGCCCTTGATGCTGATAGCTCCCAAACCTCAAGACAAAAAGGGCATGGGACTCCCACCACG  1772

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1773  AATCAGCTCCCTTGCTTCTGGAAATGTCCGGTCGTTGCCATCACAGCAGATGGTAAACCGATTGTCAATACCAA  1846

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1847  AGCCCAACTTAAATTCAACGGGAGTCAACATGATGTCCAATGTTCACCTGCAGCAAAACAACTATGGAGTCAAA  1920

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1921  TCTGTGGGCCAGAGCTATGGTGTTGGCCAGTCAGTGAGGCTGGGACTAGGTGGCAATGCTCCAGTTTCCATCCC  1994

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 1995  TCAACAGTCTCAGTCCGTGAAACAGTTACTTCCAAGTGGGAATGGGAGGTCTTTTGGGCTAGGTGCTGAGCAGA  2068

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2069  GGCCCCCAGCAGCAGCCAGGTACTCCCTGCAGACTGCCAACACCTCTCTACCCCCAGGCCAAGTGAAGTCTCCC  2142

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2143  TCTGTGTCTCAGTCACAGGCATCTAGAGTATTAGGTCAGTCCAGTTCTAAACCTCCACCAGCCGCCACAGGCCC  2216

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2217  TCCTCCAAGCAACCACTGTGCCACTCAGAAGTGGAAAATCTGTACAATCTGTAACGAGCTTTTCCCTGAGAATG  2290

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2291  TCTATAGCGTTCACTTCGAAAAGGAGCATAAAGCTGAGAAAGTCCCAGCCGTAGCTAACTACATTATGAAAATA  2364

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2365  CACAATTTTACTAGCAAATGCCTCTACTGTAATCGCTATTTGCCTACAGATACCCTACTCAACCATATGTTAAT  2438

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2439  TCATGGTCTGTCTTGTCCGTATTGCCGTTCCACCTTCAATGATGTAGAGAAGATGGCAGCACACATGCGAATGG  2512

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2513  TTCATATTGATGAAGAGATGGGGCCTAAAACGGATTCTACTTTGAGCTTTGATTTGACATTGCAACAGGGCAGT  2586

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2587  CACACCAACATTCATCTCCTGGTGACCACATACAACCTGAGGGATGCCCCGGCTGAATCAGTTGCTTACCATGC  2660

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2661  CCAAAATAATGCCCCAGTTCCTCCAAAGCCACAACCAAAAGTTCAGGAAAAAGCAGATGTCCCGGTTAAAAGTT  2734

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2735  CACCTCAAGCTGCAGTGCCCTATAAAAAAGATGTTGGGAAGACCCTTTGCCCTCTTTGCTTTTCAATACTAAAA  2808

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2809  GGACCCATATCTGATGCACTTGCACATCATTTACGAGAAAGACACCAAGTTATTCAGACAGTTCATCCGGTTGA  2882

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2883  GAAAAAGCTAACTTACAAATGTATCCATTGCCTTGGTGTGTATACTAGCAACATGACAGCCTCAACCATCACTC  2956

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 2957  TGCATCTAGTCCACTGCAGGGGTGTTGGAAAAACCCAGAATGGCCAGGACAAGACAAACGCACCTTCTCGGCTC  3030

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3031  AATCAGTCTCCAGGCCTGGCCCCTGTGAAGCGCACGTATGAGCAGATGGAGTTTCCACTGCTAAAAAAGCGGAA  3104

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3105  GCTGGAGGAGGATGCTGATTCCCCTAGCTGCTTTGAAGAGAAGCCAGAAGAGCCTGTTGTTTTAGCTTTAGACC  3178

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3179  CCAAGGGTCATGAAGATGATTCTTATGAGGCTAGGAAAAGCTTTCTCACAAAGTACTTCAACAAACAGCCCTAT  3252

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3253  CCCACCAGGAGAGAAATTGAGAAGTTAGCTGCCAGTCTATGGCTATGGAAGAGTGACATTGCCTCCCATTTCAG  3326

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3327  TAACAAGAGGAAGAAGTGTGTCCGCGACTGTGAAAAGTACAAGCCTGGTGTGCTGCTAGGTTTTAACATGAAAG  3400

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3401  AATTAAATAAAGTCAAACACGAGATGGATTTTGATGCTGAGTGGCTGTTTGAAAATCACGATGAGAAAGACTCA  3474

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3475  AGAGTCAATGCTAGCAAGACTGTTGACAAAAAGCATAACCTTGGGAAAGAAGATGATAGCTTCTCAGATAGTTT  3548

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3549  TGAACATTTGGAAGAAGAATCCAATGGAAGCGGGAGTCCTTTTGACCCTGTCTTTGAAGTTGAGCCTAAAATTC  3622

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3623  CCAGTGATAATTTAGAGGAGCCTGTACCGAAGGTTATTCCGGAAGGTGCTTTGGAATCTGAGAAGCTAGACCAA  3696

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3697  AAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGGTTCAAAATATGAAACTATCCATTTGACTGAGGAACCAGC  3770

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3771  CAAATTAATGCATGATGCCTCTGATAGTGAGGTAGACCAAGATGATGTAGTTGAGTGGAAAGATGGTGCTTCAC  3844

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3845  CATCTGAGAGTGGGCCTGGTTCCCAACAAATCTCAGACTTTGAGGATAATACATGTGAAATGAAACCAGGAACC  3918

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3919  TGGTCTGATGAGTCTTCCCAGAGTGAAGATGCAAGGAGCAGTAAGCCAGCTGCCAAAAAAAAGGCTACAGTGCA  3992

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 3993  AGATGACACAGAGCAGTTAAAATGGAAGAATAGTTCCTATGGAAAAGTTGAAGGGTTTTGGTCCAAGGACCAGT  4066

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4067  CACAGTGGGAAAATGCATCTGAGAATGCAGAGCGCTTACCAAACCCACAGATTGAGTGGCAGAATAGCACAATT  4140

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4141  GACAGTGAGGACGGGGAGCAGTTTGACAGCATGACTGACGGAGTTGCTGATCCCATGCATGGCAGCTTAACTGG  4214

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4215  AGTGAAGCTGAGCAGCCAGCAAGCCTGAGGCCCTGGCGTGCCATAGCATATGCATATGGGCCGTGTTGCATCCT  4288

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4289  GGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTCTAACTGGCACTACCTTGCAAGGACTGGTCAGT  4362

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4363  CAGCAGGCTGTGGGGATGTGTGACCACTGTAGTCTCAGTGGTTATTTCCAAGTCTATGATAGATGACTGGTTGA  4436

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4437  TCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATG  4510

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4511  CACACAGGGAGAAGTAGTTCCTTACCTACCTGCCTTCTCAGCATTTCTTCCCCTCAGATGTTTGGTTGGATGTC  4584

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4585  CTGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTACCAGTCAAATGTGTCTAGTA  4658

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4659  GACTTGGGAACATGGACCGTTTTTTCATGTATCTTCTGAATAGTTGAAATGTATATTTGTACAGTCTTTTAGAC  4732

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4733  CTAAAGTGATGCTTATGACACTGTTACTGTGTGCCCGTCATAGATTGGTTTTTAGTGTTGCCCTTGCTGTGTGA  4806

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4807  TAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTT  4880

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4881  TGCACATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCTCCTGTATTATA  4954

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 4955  GAATTTTTTTCTTGTTCTGAGTATCCTTGACATTACAATTGTCAAAAATGGTATTTCAGATCTCTTTCTGAGAC  5028

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 5029  CTTTTAAGCTAAAATAACATGCAAGAATTGATTTTACAGCTACTAATTTTGACACCTTTTAGACCTGTAAGAGT  5102

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 5103  GTTGTATCAGAGCAACAAGCACAGTTGAGTGCTGCGTTTGGGATATTTAGTTTCCTCTTTAGTTGAGCACCACT  5176

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 5177  GGGTGTATTCATTTATACCATCTAATATATGACACACTGTTGTAGTCTGTATGATTTTGTGGTCTTTATTTCTC  5250

Query  781  --------------------------------------------------------------------------  780
                                                                                      
Sbjct 5251  TTTGTATTCATTTTAAGCATCTAAATAAATTGCTGTATTGTGCTTAATGTAAATATTTGCTTTTATTACACACG  5324

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