Nucleotide Global Alignment
Description
- Query:
- TRCN0000467405
- Subject:
- NR_144521.1
- Aligned Length:
- 1875
- Identities:
- 940
- Gaps:
- 932
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGGCTCCGAAGTCGCTGGGTACACGGCGCCTCCTCCGAGCGACACGCGCGGGAGCTGGGGCTGGGGCTGTTCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCTGCTCGAAGCTTCGTCACCGTCGCCCTGTGGGTGCAGTGCAGCATTGTACTGCAAGTCAATCGATACAATA 148
Query 1 ---------------------ATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGT 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATTTAAGTCACTTCAGCTATAATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGT 222
Query 54 ATTCAAATGCAGAAACAAAACCTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTG 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATTCAAATGCAGAAACAAAACCTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTG 296
Query 128 TTGTTAAGAAAATAGCACTAAGAGAAATACGTATGTTGAAGCAAATTAAAACAATNCCAAATCTTGTGAACCTC 201
|||||||||||||||||||||||||||||||||||||||||| |||||||||| .||||||||||||||||||
Sbjct 297 TTGTTAAGAAAATAGCACTAAGAGAAATACGTATGTTGAAGC-AATTAAAACA--TCCAAATCTTGTGAACCTC 367
Query 202 ATCGAAGGTGTTCAGGAGAAAAAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAG 275
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 ATCG-AGGTGTTCAGGAG-AAAAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAG 439
Query 276 CTGGAAAGAAACCCAAATGGAGTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAA 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 CTGGAAAGAAACCCAAATGGAGTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAA 513
Query 350 TTTCTGTCATATACATAACTGTATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAA 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 TTTCTGTCATATACATAACTGTATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAA 587
Query 424 TCAAGATTTGTGACTTCGGGTTTGCACAAATTCTGA-------------------------------------- 459
||||||||||||||||||||||||||||||||||||
Sbjct 588 TCAAGATTTGTGACTTCGGGTTTGCACAAATTCTGAGTTGGACTTCATCTTTCTCTGGTGCCTCCTTGATTGGC 661
Query 460 -----------------------------------------------------------------------TTC 462
|||
Sbjct 662 TTAATAGTTGACCTTCTGAATTCTTTTTCTGCCAATTCAGAGATTTTTCTCCTGGCTTGGATCCATTGCTGTTC 735
Query 463 CAGGAGATGCCTACACCGATTATGTAGCTACGAGATGGTACCGAGCTCCTGAACTTCTTGTGGGAGATACTCAG 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 736 CAGGAGATGCCTACACCGATTATGTAGCTACGAGATGGTACCGAGCTCCTGAACTTCTTGTGGGAGATACTCAG 809
Query 537 TATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGTTTTTGCAGAGCTCCTGACAGGCCAGCCACTGTGGCC 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 810 TATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGTTTTTGCAGAGCTCCTGACAGGCCAGCCACTGTGGCC 883
Query 611 TGGAAAATCAGATGTGGACCAACTTTATCTGATAATCAGAACACTAGGAAAATTAATCCCAAGACATCAATCAA 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 TGGAAAATCAGATGTGGACCAACTTTATCTGATAATCAGAACACTAGGAAAATTAATCCCAAGACATCAATCAA 957
Query 685 TCTTTAAAAGTAACGGGTTTTTCCATGGCATCAGTATACCTGAGCCAGAAGACATGGAAACTCTTGAGGAAAAG 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 TCTTTAAAAGTAACGGGTTTTTCCATGGCATCAGTATACCTGAGCCAGAAGACATGGAAACTCTTGAGGAAAAG 1031
Query 759 TTCTCAGATGTTCATCCTGTGGCTCTGAACTTCATGAAGGGGTGTCTGAAGATGAATCCAGATGACAGATTAAC 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 TTCTCAGATGTTCATCCTGTGGCTCTGAACTTCATGAAGGGGTGTCTGAAGATGAATCCAGATGACAGATTAAC 1105
Query 833 CTGTTCCCAACTCCTGGAGAGCTCCTACTTTGATTCTTTTCAAGAGGCCCAAATTAAAAGAAAAGCACGTAATG 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1106 CTGTTCCCAACTCCTGGAGAGCTCCTACTTTGATTCTTTTCAAGAGGCCCAAATTAAAAGAAAAGCACGTAATG 1179
Query 907 AAGGAAGAAACAGAAGACGCCAACAGGT---------------------------------ACTTCCGC----- 942
||||||||||||||||||||||||||.| ||.|||||
Sbjct 1180 AAGGAAGAAACAGAAGACGCCAACAGATGGAGTTTCAATGGCGCTATCTCAGCTCACTGCAACCTCCGCCTCCT 1253
Query 943 ----TCAAAAGT-------------------------------------------------------------- 950
|| ||||
Sbjct 1254 GGGTTC--AAGTGATTCTCCTGCCTCAGCCTACTAAGTAGCTGAGATTACAGATATGAGCCACCACACCCAGCT 1325
Query 951 -------------------------------------------------------------------------- 950
Sbjct 1326 AATTTTGTATTTTTAATATAGATGGGGTTTCACCATGTTGACCAGGCTGGTCTTGAACTCCTGACCTTGGGTGA 1399
Query 951 -------------------------------------------------------------------------- 950
Sbjct 1400 TCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATAAGCCACCGCGCCTGGCCTGGCTCAGTCAACT 1473
Query 951 -------------------------------------------------------------------------- 950
Sbjct 1474 TTTAATTTACCCCAAAATTTGCTTAAGCTGAGAATTGGTAATCCTACTCAACAGGCATATAAATGATTTGTATT 1547
Query 951 -------------------------------------------------------------------------- 950
Sbjct 1548 TTTAAAGTTAAAATTTTTCTTTCTGTTATGAACACTACTCATTGACCATATGTCTAAATATTGTCATATTGAAG 1621
Query 951 -------------------------------------------------------------------------- 950
Sbjct 1622 ATTCTGTGTGTCCATTTATTATTTTAGCACATATTTGTGTAGAAGCAGGTATATTTCAAATCACTTGAAGTCGT 1695
Query 951 -------------------------------------------------------------------------- 950
Sbjct 1696 AGCTATATGTTAGTTAACATTGATAATTAGCCTAATCGTAATTTAAACTACTAGAAACAATTCACTAAAAGCAA 1769
Query 951 -------------------------------------------------------------------------- 950
Sbjct 1770 TTTTAGTTTTATTATGTTAAATATACATAATATTATGGTTTTTAAAAATTTAGCTTAAGATACTTTGAAAACCC 1843
Query 951 ------------------------- 950
Sbjct 1844 ACATATGAGATTAAATATTTTGGTG 1868
