Nucleotide Global Alignment

Description

• Query: TRCN0000467405
• Subject: XM_017003985.1
• Aligned Length: 953
• Identities: 507
• Gaps: 431

Alignment

Query   1  ATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAAC  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAAC  74

Query  75  CTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTGTTGTTAAGAAAATAGCACTAA  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  CTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTGTTGTTAAGAAAATAGCACTAA  148

Query 149  GAGAAATACGTATGTTGAAGCAAATTAAAACAATNCCAAATCTTGTGAACCTCATCGAAGGTGTTCAGGAGAAA  222
           ||||||||||||||||||||| ||||||||||  .|||||||||||||||||||||| ||||||||||||| ||
Sbjct 149  GAGAAATACGTATGTTGAAGC-AATTAAAACA--TCCAAATCTTGTGAACCTCATCG-AGGTGTTCAGGAG-AA  217

Query 223  AAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAGCTGGAAAGAAACCCAAATGGA  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 218  AAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAGCTGGAAAGAAACCCAAATGGA  291

Query 297  GTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAATTTCTGTCATATACATAACTG  370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292  GTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAATTTCTGTCATATACATAACTG  365

Query 371  TATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAATCAAGATTTGTGACTTCGGGT  444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366  TATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAATCAAGATTTGTGACTTCGGGT  439

Query 445  TTGCACAAATTCTGATTCCAGG---AGATGCCTACACCGATTATGTAGCTACGAGATGGTACCGAGCTCCTGAA  515
           ||||||||||||||| ...|||   ||||..|||.|          |||                        |
Sbjct 440  TTGCACAAATTCTGA-GAAAGGAAAAGATTTCTAAA----------AGC------------------------A  478

Query 516  CTTCTTGTGGGAGATACTCAGTATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGTTTTTGCAGAGCTCCT  589
           .||||                    ||||||||                             ||||      ||
Sbjct 479  TTTCT--------------------GTTCTTCA-----------------------------TGCA------CT  497

Query 590  GACAGGCCAGCCACTGTGGCCTGGAAAATCAGATGTGGACCAACTTTATCTGATAATCAGAACACTAGGAAAAT  663
           .|.|    |.|.||.||       ||||        |.|.|||               ||||            
Sbjct 498  TATA----ATCTACAGT-------AAAA--------GAAACAA---------------AGAA------------  525

Query 664  TAATCCCAAGACATCAATCAATCTTTAAAAGTAACGGGTTTTTCCATGGCATCAGTATACCTGAGCCAGAAGAC  737
                                                                                     
Sbjct 526  --------------------------------------------------------------------------  525

Query 738  ATGGAAACTCTTGAGGAAAAGTTCTCAGATGTTCATCCTGTGGCTCTGAACTTCATGAAGGGGTGTCTGAAGAT  811
                                                                                     
Sbjct 526  --------------------------------------------------------------------------  525

Query 812  GAATCCAGATGACAGATTAACCTGTTCCCAACTCCTGGAGAGCTCCTACTTTGATTCTTTTCAAGAGGCCCAAA  885
                                                                                     
Sbjct 526  --------------------------------------------------------------------------  525

Query 886  TTAAAAGAAAAGCACGTAATGAAGGAAGAAACAGAAGACGCCAACAGGTACTTCCGCTCAAAAGT  950
                                                                            
Sbjct 526  -----------------------------------------------------------------  525