Nucleotide Global Alignment
Description
- Query:
- TRCN0000467465
- Subject:
- XR_001748865.1
- Aligned Length:
- 5463
- Identities:
- 1590
- Gaps:
- 3865
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCACTCCCGGCCTTAGTCGGGTGCGCGCGTGCAGGGCTGTTTCCGGCTTAGACTCAGTGGACCGGAATCTGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCGGGTGTACCTGGCTGAGTCTCTGTGGCCGCGGAGGCGCGGAGCTAAGCGGCTCGGATTATCCTGGGCAGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGAGACTTGACCAGCTAAACACTTCCGTCGGTCCGGGGCGTGGACGGGGCCAGATCAGCCTCCTGCTCTCCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTCAGGGCCACGGAAAGGCACAAATCCATCCGTGCGACTCCTGGTACCCAGACCGGGAGGTTGTCTAGTCACG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCGGTCTGTGTTGGGCGAGAGCTGAGGAGCCGGCGTCCCTGCCAACGACTCGGCCCCGGGACGGTCAGGAGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGGCCCTGGTCCCGCACCTGTCTTCGGGCGGACGCATCCCTCACGGTCTCTCCGCAGCCCGCGGGTCCTGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCGCAGGCAGCGCGCGAACGTGGGCGTGGGGATGGCCACCAGTTTCCGGACAGCTTCGTGCTGGCCTGTAACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACATGGGAGGTCTAAACTGGAAATACATAAAGACACCTTATTGTATTCGTGGAAGCTCAGAGTGTGACCAACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAACCCTCAAGAGGACCGAGATTTAAAGTAACCAGCTTGATAAGCACCTCAACGTAATAAGGGCACAGTAGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCTTCATTTTTCTCATCACAGCCTCAGGCTTCCTGTCAGCCCTTCCCTAGTGCTCGTCGTGAGGAGAGCTGATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGCTCTGGTCACAGCCTTGTTTGTTATTGACTCTCAGTTACTTTCAGGTATGGGAAAGTTCAGTCCACACTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACTCCAAGCTCTTGTACCTCCCCTCATTCTAGCCTGCAGAGGGGAGATGGAGGAGGCTTGTCTGTATTCCCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCATTTACTTGTTGCCCTCCGACGGGGGCTCCTTCTGGGTTGGGGTGGGAAAATCAGTGGTTAGAGAAAAAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACAGAGTCTCCTGTTGTGCGGTGGTCAGTACCCAGAGTTATGACAGGCATCAGTGGGGCTTGGTTGGAGCCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGACAGGGCTCTGCCCTGCAGTTCCATGGTGTATGTGATTCTTTCTCTCACTGCATGCAGACTCACCCAGAAGT 1110
Query 1 -------------------------------------------------------------------ATGGCCA 7
|||..|.
Sbjct 1111 CCACTCACTGCCTCTTCCCCTGGGGTCTCCCTCCCTGCAGGTAGTGCTGCTGAGGAGGAGCCTGCTAATGAGCT 1184
Query 8 CCAGT------TTCCGGACAGCTTC---GTG--------------------------CTG-----GGGATTATT 41
|.||| |||.||| |.|||| ||| ||| |||||||||
Sbjct 1185 CAAGTGTCAAGTTCGGGA-ATCTTCTGGGTGTTCCTTGGGCCCAGGGAAACAGTGCCCTGCCTGAGGGATTATT 1257
Query 42 GTCATTCAAGGATATATCTATGGAGTTCACCTGGGATGAATGGCAGCTACTGGATTCTACACAGAAGTACCTGT 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 GTCATTCAAGGATATATCTATGGAGTTCACCTGGGATGAATGGCAGCTACTGGATTCTACACAGAAGTACCTGT 1331
Query 116 ACAGAGATGTGATATTGGAAAACTATCATAACCTGATATCAGTGGGGTATCATGGTACCAAGCCTGACTTAATC 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 ACAGAGATGTGATATTGGAAAACTATCATAACCTGATATCAGTGGGGTATCATGGTACCAAGCCTGACTTAATC 1405
Query 190 TTCAAGTTGGAACAAGGAGAAGATCCATGGATAATAAATGCCAAAATTTCCAGGCAGAGCTGTCCAGATGGCTG 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 TTCAAGTTGGAACAAGGAGAAGATCCATGGATAATAAATGCCAAAATTTCCAGGCAGAGCTGTCCAGATGGCTG 1479
Query 264 GGAAGAATGGTACCAGAACAATCAAGATGAGCTTGAGAGTATTGAAAGAAGCTATGCTTGTAGTGTGTTGGGAA 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 GGAAGAATGGTACCAGAACAATCAAGATGAGCTTGAGAGTATTGAAAGAAGCTATGCTTGTAGTGTGTTGGGAA 1553
Query 338 GACTTAATCTGAGCAAAACCCATGATTCTTCAAGACAGAGACTCTATAACACACGTGGAAAAAGTTTGACACAA 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 GACTTAATCTGAGCAAAACCCATGATTCTTCAAGACAGAGACTCTATAACACACGTGGAAAAAGTTTGACACAA 1627
Query 412 AACTCAGCTCCAAGCAGAAGTTATTTAAGAAAGAATCCTGATAAGTTTCATGGTTATGAAGAACCATATTTTCT 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 AACTCAGCTCCAAGCAGAAGTTATTTAAGAAAGAATCCTGATAAGTTTCATGGTTATGAAGAACCATATTTTCT 1701
Query 486 TAAGCATCAAAGAGCTCATAGCATAGAAAAAAACTGTGTGTGTAGTGAATGTGGGAAAGCTTTTCGTTGTAAGT 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 TAAGCATCAAAGAGCTCATAGCATAGAAAAAAACTGTGTGTGTAGTGAATGTGGGAAAGCTTTTCGTTGTAAGT 1775
Query 560 CACAGCTCATTGTACATCTCAGAATTCATACAGGAGAGAGACCTTATGAATGCAGTAAATGTGAAAGAGCCTTC 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1776 CACAGCTCATTGTACATCTCAGAATTCATACAGGAGAGAGACCTTATGAATGCAGTAAATGTGAAAGAGCCTTC 1849
Query 634 AGTGCCAAGTCAAACCTTAATGCTCATCAGAGAGTTCATACAGGAGAAAAACCCTACTCATGTAGTGAGTGCGA 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1850 AGTGCCAAGTCAAACCTTAATGCTCATCAGAGAGTTCATACAGGAGAAAAACCCTACTCATGTAGTGAGTGCGA 1923
Query 708 GAAGGTCTTCTCTTTCAGGTCACAGCTCATTGTCCATCAGGAAATTCACACAGGAGGGAAACCCTATGGCTGCA 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1924 GAAGGTCTTCTCTTTCAGGTCACAGCTCATTGTCCATCAGGAAATTCACACAGGAGGGAAACCCTATGGCTGCA 1997
Query 782 GTGAATGTGGGAAAGCCTACAGTTGGAAATCACAGCTTCTTTTACACCAGAGAAGTCACACAGGAGTGAAACCG 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1998 GTGAATGTGGGAAAGCCTACAGTTGGAAATCACAGCTTCTTTTACACCAGAGAAGTCACACAGGAGTGAAACCG 2071
Query 856 TATGAATGCAGCGAATGTGGGAAAGCCTTTAGTTTGAAGTCTCCATTCGTTGTACACCAGAGAACTCATACAGG 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2072 TATGAATGCAGCGAATGTGGGAAAGCCTTTAGTTTGAAGTCTCCATTCGTTGTACACCAGAGAACTCATACAGG 2145
Query 930 AGTGAAACCCCATAAATGCAGTGAATGTGGGAAAGCCTTTAGGAGTAAGTCCTATCTCCTTGTTCACATCCGAA 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2146 AGTGAAACCCCATAAATGCAGTGAATGTGGGAAAGCCTTTAGGAGTAAGTCCTATCTCCTTGTTCACATCCGAA 2219
Query 1004 TGCATACAGGAGAAAAACCCTATCAATGCAGTGATTGTGGGAAAGCCTTCAATATGAAGACACAACTCATTGTA 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 TGCATACAGGAGAAAAACCCTATCAATGCAGTGATTGTGGGAAAGCCTTCAATATGAAGACACAACTCATTGTA 2293
Query 1078 CATCAGGGAGTTCACACAGGAAATAATCCTTATCAATGCGGCGAATGTGGGAAAGCCTTTGGTAGGAAGGAACA 1151
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 2294 CATCAGGGAGTTCACACAGGAAATAATCCTTATCAATGCGGTGAATGTGGGAAAGCCTTTGGTAGGAAGGAACA 2367
Query 1152 GCTCACTGCACATCTGAGAGCTCATGCAGGAGAGAAGCCCTATGGATGCAGTGAATGTGGGAAGGCTTTCAGCA 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2368 GCTCACTGCACATCTGAGAGCTCATGCAGGAGAGAAGCCCTATGGATGCAGTGAATGTGGGAAGGCTTTCAGCA 2441
Query 1226 GCAAGTCATACCTTGTTATACATAGGAGAACACACACCGGAGAGAGACCCTATGAATGTAGTTTGTGTGAGAGA 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2442 GCAAGTCATACCTTGTTATACATAGGAGAACACACACCGGAGAGAGACCCTATGAATGTAGTTTGTGTGAGAGA 2515
Query 1300 GCCTTTTGTGGAAAATCACAGCTGATTATACATCAGAGAACTCATTCAACTGAGAAGCCCTATGAATGCAATGA 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2516 GCCTTTTGTGGAAAATCACAGCTGATTATACATCAGAGAACTCATTCAACTGAGAAGCCCTATGAATGCAATGA 2589
Query 1374 ATGTGAAAAAGCCTACCCTAGGAAGGCATCACTTCAGATACACCAGAAAACTCATTCGGGAGAGAAACCTTTTA 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2590 ATGTGAAAAAGCCTACCCTAGGAAGGCATCACTTCAGATACACCAGAAAACTCATTCGGGAGAGAAACCTTTTA 2663
Query 1448 AATGCAGTGAATGTGGAAAAGCCTTCACTCAGAAGTCATCTCTCAGTGAACATCAGAGAGTTCACACTGGAGAG 1521
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 2664 AATGCAGTGAATGTGGAAAAGCCTTCACTCAGAAGTCATCTCTCAGTGAACATCAGAGAGTTCACACCGGAGAG 2737
Query 1522 AAACCATGGAAATGCTCTGAATGTGGGAAATCCTTCTGTTGGAATTCAGGGCTTCGTATACATCGGAAGACTCA 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2738 AAACCATGGAAATGCTCTGAATGTGGGAAATCCTTCTGTTGGAATTCAGGGCTTCGTATACATCGGAAGACTCA 2811
Query 1596 TAAA---------------------------------------------------------------------- 1599
||||
Sbjct 2812 TAAATGAGAAATCAGAATGATGCAATGTGAGAAACTGATGTTCAGGAGACTTCGGATAATATAGACAGGATTTA 2885
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 2886 CAAGCAGGAGGCCCTAAAATTACACTCATGTCAAAAATCAGAGAGGAGAGAGACCAACCATATTTGGGATGAGT 2959
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 2960 GTAAAAGCTTTCAGAAATAAGTTACAAATCTTTGTAGATGAAAATAATGGAAGGAATGTGGAGCAATAAATGTA 3033
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3034 TCAAATGTTGTAGTATCATCATGAAGATTCAGAGAATTTACACTAGGAACACCTTATAAGTTGAATAAATTAAG 3107
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3108 GAAGCATTTTCCCATTGAAAGTGTGTTCCATGGAAAGTCACATTCCAGATTTGAAGCTGTGTTTTTGTAAAATA 3181
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3182 AAATCTTGGTATGAACAGTTGACTTCATGGTGGAGTATAAAGTTGTTTTTTTAAAAATATGTAAATAATGTTCA 3255
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3256 GGAAAAACGCAGGGAACAGAGTCTTAAAGTTAATGGATATTTAATGTGACTTTCCTGAGTTAACACTGAATAGT 3329
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3330 ATTTCTAAAATTTTTTGTACTTTATTTTTTAATGTAACTTGTTCTATCTATCTATATATATATTTGATAGTTTG 3403
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3404 TGGAATAATATCCCCCAGTATTTTCCATATTAAATGCTAATTATCTTTTGATTTCTTTTTCATAAGCAGATCTG 3477
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3478 GCATTTATTACAGGGCTGCCGCTTAAGAGAACTCATTATAATGAACGTTTATTATATTTTGCAGTTCCATGCCT 3551
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3552 GTTGTCCATTGATTGACATGAGCACCCCTGTTTTCTCTGGAGAAATACCTCCCCTCTCTGGGGTGCTTCCTGTG 3625
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3626 GTAGTGTCTTTCAGGTATCCGTTCCACTAGCTACAGGCATTCAGATTGGGAGAAATAGCACCTCAGGAACTGCA 3699
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3700 TCCTCAAGAGTCCCATCTGCACCTGTAGCAGAGTTTGACGATGAGATCCTGGTCTTCAATCTGATATTATAACG 3773
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3774 GGATGAGACATTGGGATCTTGGGGGAGGAGATGGCTGTACTTTGCATGGGGGGGATGTGAATTGTTACAGCCAG 3847
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3848 AGGGCAGACCGTGGTAATCCCAAACATGGCCAAAACAGTATCTCCTATCACACATTCTCTTCCACAGTGTGCCT 3921
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3922 GCTATATATTTCTCCCATGAGAGTTGAGGTCGACACCAGCTCCTTGAACCTGGGTGGACTTGTAATTTGCCTGT 3995
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 3996 AGCCAACAGAATGCAGCAGAAATAGGCCAGGTGCAGTGGCTCATACCTGTAATCCCAGAGCTTCAGGAGGCCAA 4069
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4070 GGCAGGAAAATTGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGAAACACAGTGAGACCCCGTTTCTATTTAAG 4143
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4144 AAAGAAAAAAAAGAATGCAGCAGAGATGAAGCTGTGTAACTTCCAAAGCTAGGTCATAAAAGGTGATGCAGCTT 4217
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4218 CCATCTTGTCACTGGAATTCACACTCTTGAACCATTCAGCAGCCATATAAGCAGTCCAATGGCCCTGAGCTGCC 4291
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4292 CTGCAGTAAGAAAGCCCAAACTAGCTCACACACAGACTACATCAAGAGTGAGAGATGCCTAAAACACCCCCAGG 4365
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4366 CATTCCAGCCCCTTCTGTTCTAGATCTAGCCTTAGAAAAAGCTGCCTAGCTGAGCCTATCTTGAATTTCTGACC 4439
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4440 CAGGAAACTATTAGATATAATAAGTCACTTTTTTTTTTTTTTGAGATGCACTCTCACTCTTTCCCAGGCTGGAG 4513
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4514 TGCAGTGGCACGATCCTGGCTCACTGCAGCCTCCTCCTACTGGGTTCAAGCAGTTCTCTGCCTCAGCCTCCCAA 4587
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4588 GTAGCTGGGATTACAGGTGCTCGCCACCATACTTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCA 4661
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4662 TCTTGGGCAGGCTGGTCTTGAACTCCTGACCTCATGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACA 4735
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4736 GGCGTAAGCCACTGCGCCTGGCCAATAAGTCTCTTTTTTTAGGTAATCAAGTTAAAATAATAAGTCACTAAATT 4809
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4810 TTGAGGTGTTCTGTTATGTAGAAGAGTGACTGGACCAACCCATAAAAAGGACAACTTCATATAGTTCAACTTTT 4883
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4884 TTTTTTTTTTTTTTTTTTTTTGATACAGAGTCTCGTTCTGTCACCCAGGCTGGAGTGCAGTGGCATAATTTCAG 4957
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 4958 CTCATGGCAACCTCCGCCTCCAAGGTTCAAGTGATTATCATGCCTCAGCCTCCCAAGTAGCTGAGATTACGGGC 5031
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 5032 ACCTGCCACCACGCCTGGATAATGTTTGTATTTTTAGTAGAGGTGGGGTTTCACCATGTTGACTAGGCTGGTCT 5105
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 5106 CGAACTCCTGACCTCAGGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCATTGCA 5179
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 5180 TCTGGCCTAGTTCAACTTTATAAATAAATATGTCAAAGATAATTCAATATTAAAGTTTATATATTTATCATTTT 5253
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 5254 AACCAAATAATGTAGAAATAGAGTGATATGAAACATAAATACCTATATAGGTTAAGAAAAATATTCAATAAATT 5327
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 5328 GGAACAATTCTTTGTTATAAAATTCTTAAGAAACTCAGAATAAAATGCAACACCTTTTTACGATTATAAACCCC 5401
Query 1600 ------------------------------------------------------------- 1599
Sbjct 5402 TCAGCAAACATACTTCAAGCAGAACCTTACGAACAGTATAATTAAAATGAGGAACCGCTGA 5462
