Nucleotide Global Alignment
Description
- Query:
- TRCN0000467471
- Subject:
- XR_001743443.2
- Aligned Length:
- 4332
- Identities:
- 1093
- Gaps:
- 3231
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGCCTGGAGGATTTAACCCAGGAGAGCCGCTGGTGGGAGGCGCGGCTGGCGCCGCTGCGCGCATGGGCCTGTT 74
Query 1 --------------------------------ATGATAGTGTTTGTCAGGTTCAACTCCAGCCATGGTTTCCCA 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCTGGCCCGCAGCCGCCACCTACCCAGTGACCATGATAGTGTTTGTCAGGTTCAACTCCAGCCATGGTTTCCCA 148
Query 43 GTGGAGGTCGATTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGTTGCTAAGCGACAGGGGGTTCCGGCTGA 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTGGAGGTCGATTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGTTGCTAAGCGACAGGGGGTTCCGGCTGA 222
Query 117 CCAGTTGCGTGTGATTTTCGCAGGGAAGGAGCTGAGGAATGACTGGACTGTGCAGAATTGTGACCTGGATCAGC 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCAGTTGCGTGTGATTTTCGCAGGGAAGGAGCTGAGGAATGACTGGACTGTGCAGAATTGTGACCTGGATCAGC 296
Query 191 AGAGCATTGTTCACATTGTGCAGAGACCGTGGAGAAAAGGTCAAGAAATGAATGCAACTGGAGGCGACGACCCC 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGAGCATTGTTCACATTGTGCAGAGACCGTGGAGAAAAGGTCAAGAAATGAATGCAACTGGAGGCGACGACCCC 370
Query 265 AGAAACGCGGCGGGAGGCTGTGAGCGGGAGCCCCAGAGCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCCC 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGAAACGCGGCGGGAGGCTGTGAGCGGGAGCCCCAGAGCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCCC 444
Query 339 AGGAGACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGTCCAG 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGGAGACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGTCCAG 518
Query 413 CAGGTAGATCAATCTACAACAGCTTTTATGTGTATTGTAAAGGCCCCTGTCAAAGAGTGCAGCCGGGGAAACTC 486
|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||
Sbjct 519 CAGGTAGATCAATCTACAACAGCTTTTATGTGTATTGCAAAGGCCCCTGTCAAAGAGTGCAGCCGGGAAAACTC 592
Query 487 AGGGTACAGTGCAGCACCTGCAGGCAGGCAACGCTCACCTTGACCCAGGGTCCATCTTGCTGGGATGATGTTTT 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGGTACAGTGCAGCACCTGCAGGCAGGCAACGCTCACCTTGACCCAGGGTCCATCTTGCTGGGATGATGTTTT 666
Query 561 AATTCCAAACCGGATGAGTGGTGAATGCCAATCCCCACACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAAT 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AATTCCAAACCGGATGAGTGGTGAATGCCAATCCCCACACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAAT 740
Query 635 GTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACATC 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACATC 814
Query 709 ACTTGCATTACGTGCACAGACGTCAGGAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTT 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACTTGCATTACGTGCACAGACGTCAGGAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTT 888
Query 783 AGACTGTTTCCACTTATACTGTGTGACAAGACTCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGCTACT 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGACTGTTTCCACTTATACTGTGTGACAAGACTCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGCTACT 962
Query 857 CCCTGCCTTGTGTGGGAACTGGAGACACAGTGGTGCTTAGAGGAGCTCTGGGGGGATTCAGGAGAGGAGTCGCT 930
|||||||||||||| |||
Sbjct 963 CCCTGCCTTGTGTG---------------------------------------------------------GCT 979
Query 931 GGCTGTCCCAACTCCTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGGAGAAGAGCAGTACAACCGGTACCA 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 980 GGCTGTCCCAACTCCTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGGAGAAGAGCAGTACAACCGGTACCA 1053
Query 1005 GCAGTATGGTGCAGAGGAGTGTGTCCTGCAGATGGGGGGCGTGTTATGCCCCCGCCCTGGCTGTGGAGCGGGGC 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1054 GCAGTATGGTGCAGAGGAGTGTGTCCTGCAGATGGGGGGCGTGTTATGCCCCCGCCCTGGCTGTGGAGCGGGGC 1127
Query 1079 TGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGG------TATGGA 1146
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1128 TGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGGTCAGTTA---A 1198
Query 1147 CAACGAAGAAC---------------------------AAAA-------------------------------- 1161
|..|..|||.| |.||
Sbjct 1199 CCTCTCAGAGCCCCGATTTCCTCATCTGTGCACTGGGGAGAATGGCTTGCCTGAGGAGCAGCGTGGACACATTG 1272
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 1273 GCATTTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGCCTCAGG 1346
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 1347 AACAACTACTCAGGCCTACAGAGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAA 1420
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 1421 CCATCAAGAAAACCACCAAGCCCTGTCCCCGCTGCCATGTACCAGTGGAAAAAAATGGAGGCTGCATGCACATG 1494
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 1495 AAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGG 1568
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 1569 GGACCACTGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCCCCATCGCCACATCCTGGGGGAGCATACCCAGTGT 1642
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 1643 CTACCTTCATTTTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTCTTCAAGTTT 1716
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 1717 TTTTCAAAGTCCAACTACAGCCAAATTGCAGAAGAAACTCCTGGATCCCTTTCACTATGTCCATGAAAAACAGC 1790
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 1791 AGAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGACAGCAGAGCCATCTGCGACA 1864
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 1865 CCACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTG 1938
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 1939 TATGGGTCATTCTCACCTGAATTCGAGACAGGCAGAATCAGTAGCTGGAGAGAGAGTTCTCACATTTAATATCC 2012
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2013 TGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGG 2086
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2087 TTCTCCAAACTAGATTCATGGCTTTAACAGTAATGTTCTTATTTAAATTTTCAGAAAGCATCTATTCCCAAAGA 2160
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2161 ACCCCAGGCAATAGTCAAAAACATTTGTTTATCCTTAAGAATTCCATCTATATAAATCGCATTAATGAAATACC 2234
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2235 AACTATGCGTAAATCAACTTGTCACAAAGTGAGAAATTATGAAAGTTAATTTGAATGTTGAATGTTTGAATTAC 2308
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2309 AGGGAAGAAATCAAGTTAATGTACTTTCATTCCCTTTCATGATTTGCAACTTTAGAAAGAAATTGTTTTTCTGA 2382
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2383 AAGTATCACCAAAAAATCTATAGTTTGATTCTGAGTATTCATTTTGCAACTTGGAGATTTTGCTAATACATTTG 2456
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2457 GCTCCACTGTAAATTTAATAGATAAAGTGCCTATAAAGGAAACACGTTTAGAAATGATTTCAAAATGATATTCA 2530
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2531 ATCTTAACAAAAGTGAACATTATTAAATCAGAATCTTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGAC 2604
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2605 ACGCCCGACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGG 2678
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2679 GAGCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG 2752
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2753 TTGACATGGATTGGATTTCAGTTCAATCAAACTTTCAGCTTTTTTTTCAGCCATTCACAACACAATCAAAAGAT 2826
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2827 TAACAACACTGCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAACCACTATCTTT 2900
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2901 TGTTCTACCTGTATTGTCTGACTTCTCAGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATG 2974
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 2975 GAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGA 3048
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3049 AATCCTTGCTGGAGGGAAGAGAGGGGATGAACTCAAGTTTTCCACATCCTGGGACACCTGTCCCTCTTTTCCTA 3122
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3123 ACTGCCTAAGATAACCCATTTCTTCCAACCATCTGAGGACAGTCCCGTCGTCTCAGAGGCCCTGCACCGGGGAG 3196
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3197 AGACTGGGCTCTGCAGCAGCCACATCAGCATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTC 3270
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3271 CAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAATGGTGGACAGATCAA 3344
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3345 AGTCTCTATAGTAAGGGAAAAAAAGAGAGGTGGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACT 3418
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3419 GAGTCCAGACCCTGATCAAGGCCTGACTTAGTGTCACTGGCAGTCCCACTAAATTACACTTCCTTACACTGGCC 3492
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3493 CGATGCGACAAATCAGGTGGCTCCCTTCTGTCACGTGGAGCACACAGTGTTTTCCATCATCCATAGCTTTCTTC 3566
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3567 CTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTG 3640
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3641 CTCCCATGAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTCTCCTTTCCCTTCT 3714
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3715 TGGTGGTGGTCTTTTCCCTTTCCAGAATAGAACAGTGATTCTTAAAATAAGTTAGAGCAGGCCGGGCGCGGTGG 3788
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3789 CTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACGAGGTCAGGAGTTCAAGACCAGCCT 3862
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3863 GGCCAAGATGATGAAACCCCGTCTCTATTAAAAATACAAAAATTAGCTGGGCGTGGTGGCAGGCACCTGTAATC 3936
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 3937 CCAGCTTCCTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGGGGCAGAGGTTGCAGTGAGCCGAGATCAC 4010
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 4011 GCCACTGAACTCCAGCCTGGGCAACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAACAAAAACAAAAAAGC 4084
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 4085 AAGATCATCCACTACACATGAACATGAATCACAGTATTATTTGCACAGGAAGGGTGTAACAAAATATGAATGTA 4158
Query 1162 -------------------------------------------------------------------------- 1161
Sbjct 4159 TCAAAAAATAGAAATAAAGTCTTTGCAGAAAAAGTCTGTTTTTCTCTGAAGTGTGTTGAGATTATCTGACAACT 4232
Query 1162 ---------------------------------------- 1161
Sbjct 4233 CTAAGATTGTACTTAAATTGTCAATAAAGCATCAAAAGAG 4272
