Nucleotide Global Alignment
Description
- Query:
- TRCN0000467473
- Subject:
- XR_870755.2
- Aligned Length:
- 2903
- Identities:
- 843
- Gaps:
- 1940
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTATTTATTTTGTGTATACGTTCACATGTGGGCACACTTGAGCCTTGGTGCAGGTGTGGAAGTCATAGGACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATTGCTAGAGTCACTTAGCTCCTAACATATGGGATCCTGGGATAGAACTCAGGTCGTGAGGACGGACAGCAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCCTTTACTCGACCAGTTGCTGAGTCATCTTGGGGTCCGGTCTTTTCCCTTCGGCAGGGTTAGGTCATTGTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCAGTGCCTGTTTTCCCGACTTCCTGTTAGAGGCCTTCGAAGGAGGAGGATCCTGGGAAATCTGAGGTCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATTTGAGCAATTCAGAGAATTGCGGAGGCTGTAAGGTAGAGAGGAAGGTCTTTGGGTCGGCTACAGTGTCTTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGAAAGTATTGTGTCACTCCGACCTTCAGTTTTCCCTGGGTATCAAGTGGCTTCTTGTGTGCAACGTGTCAGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAGAGGAAACCGATTTATTCAACAGGTGGCAATTCCCAAGCTCCACCCCCCGGGCTGGAAAACCTGGCAGCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACGGTCTACGGTCCCCCGGGCCCAGGCCCCGCGCTGCCCCTCCTTGTCTCCTCCCGGCCACGCGCTACGAGCCC 592
Query 1 ---ATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGGGCCGCGACATGCTGGCCGCCGACCTCCGGTG 71
|||||||.|||...|.||||.||.|||||||||||.|||.||||||||.|||||||.||.||||||||.||
Sbjct 593 GGGATGCAGCTCTCCAACAGGGCAGCAGCCAGGGAGGCAGCGAGCCGCGACGTGCTGGCTGCGGACCTCCGCTG 666
Query 72 CAGCCTCTTCGCCTCGGCCCTGCAGAGCTACAAGCGCGACTCGGTGCTGCGGCCCTTCCCCGCGTCCTACGCCC 145
||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||.||||||||||
Sbjct 667 CAGCCTCTTCGCCTCGGCGCTGCAGAGCTACAAGCGGGACTCGGTGCTGCGGCCCTTCCCCGCCTCCTACGCCC 740
Query 146 GCGGCGACTGTAAGGACTTTGAAGCCCTGCTTGCAGATGCCAGCAAGTTACCTAACCTGAAAGAACTTCTCCAG 219
||..|||||||||||||||.||.|||||||||||.||..|..|||.||||||.|||.||||.||||||||.|||
Sbjct 741 GCCACGACTGTAAGGACTTCGAGGCCCTGCTTGCGGACACTGGCAGGTTACCCAACTTGAAGGAACTTCTACAG 814
Query 220 TCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCAAAGGTCCTGACAATCCA 293
||.|||.||||||...||||||.|||||||||||||||||||||||||||||||||.|||.|||||||||||||
Sbjct 815 TCTTCCAGAGACACAGACAAACAGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCCAAGATCCTGACAATCCA 888
Query 294 CAGTGCAGGGAAGGCAGAGTTTGAAAAGATCCAAAAGCTGACTGGGGCTCCTCACACGCCTGTTCCTGCACCGG 367
||||||...||||||||||||||||||||||||..|||||||.||.||.||||||||.|||||.||..|.||||
Sbjct 889 CAGTGCCAAGAAGGCAGAGTTTGAAAAGATCCAGCAGCTGACCGGCGCCCCTCACACACCTGTCCCCACCCCGG 962
Query 368 ACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAGACCAAAGGAGAACGAGACCTA 441
|.|||||.|||||||||||||||||||||||.||||||.|||.|||||||||||||||||||||||||||||||
Sbjct 963 ATTTCCTATTTGAAATTGAGTACTTTGACCCGGCCAACTCCAGATTTTATGAGACCAAAGGAGAACGAGACCTA 1036
Query 442 ATCTATGCATTTCATGGTAGCCGCCTAGAAAACTTCCATTCCATTATCCACAATGGCCTGCACTGCCATCTGAA 515
||||||||.||.|||||||||||||||||.||||||||.|||||.||.||||||||||||||||||||.|||||
Sbjct 1037 ATCTATGCCTTCCATGGTAGCCGCCTAGAGAACTTCCACTCCATCATTCACAATGGCCTGCACTGCCACCTGAA 1110
Query 516 CAAGACATCCTTGTTCGGAGAGGGGACCTACCTCACCAGTGACTTAAGCCTGGCCCTCATATACAGCCCCCATG 589
||||||.||..||||.||||||||||||||||||||.||||||||.||||||||||||||.||.||.||.||||
Sbjct 1111 CAAGACTTCTCTGTTTGGAGAGGGGACCTACCTCACAAGTGACTTGAGCCTGGCCCTCATTTATAGTCCTCATG 1184
Query 590 GCCATGGGTGGCAGCACAGCCTCCTCGGCCCCATCCTTAGCTGTGTGGCCGTGTGTGAGGTCATTGACCATCCG 663
||||.||||||||.||.|||||.||.|||||.|||||.|||||.||.||.||||||||||||||.||.|||||.
Sbjct 1185 GCCACGGGTGGCAACATAGCCTTCTTGGCCCGATCCTGAGCTGCGTAGCTGTGTGTGAGGTCATCGATCATCCA 1258
Query 664 GACGTCAAGTGCCAAACCAAGAAGA------------------------------------------------- 688
||.|||||||||||||.||||||||
Sbjct 1259 GATGTCAAGTGCCAAATCAAGAAGAAGGGACAGAGTCTCACTATGAAGTAGCTCCCTAGCTGTCCTGGAACTCA 1332
Query 689 --------------------------------------------------------AGGATTCCAAGGAGATAG 706
|||||||||||||.||||
Sbjct 1333 CAGTGCAGACCAGGCTGGCCTTGAGCTCACAGGAAATCAGCCTGTCTCAGGGGCTGAGGATTCCAAGGAAATAG 1406
Query 707 ATCGCAGACGAGCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAAC 780
|.|||||.|||||.||||||||.||.||.||.||||||||.|||||.||.||||||||.||.||||||||||||
Sbjct 1407 ACCGCAGCCGAGCAAGAATCAAGCACAGCGAGGGGGGAGAGATCCCCCCTAAGTACTTTGTAGTCACCAATAAC 1480
Query 781 CAGCTGCTGCGAGTGAAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAGAGGGCTCCGAGCCAGCTCTCCTG 854
|||||.|||||.|||||||||||.|||||||||||.|||||||..|||||||||||..||||||||||||||||
Sbjct 1481 CAGCTTCTGCGGGTGAAGTACCTGCTGGTGTATTCCCAGAAGCAGCCCAAGAGGGCCTCGAGCCAGCTCTCCTG 1554
Query 855 GTTTTCCAGCCATTGGTTTACCG---TCATGATATCCCTGTATCTGCTGCTGCTGCTCATAGTGAGTGTCATCA 925
|||.||||||||.||||| || |||||||.||||||||||||||||||||||||||.||||||||||.||
Sbjct 1555 GTTGTCCAGCCACTGGTT---CGTGATCATGATGTCCCTGTATCTGCTGCTGCTGCTCATCGTGAGTGTCACCA 1625
Query 926 ACTCCTCTGCTTTCCAACACTTTTGGAATCGTGCGAAAAGA--------------------------------- 966
|||||||||..|||||.|||||.||||||||||.|||.|||
Sbjct 1626 ACTCCTCTGTGTTCCACCACTTCTGGAATCGTGTGAAGAGATGATCCCAGGTGCTTGGAGTGGGGCCACTCACC 1699
Query 967 -------------------------------------------------------------------------- 966
Sbjct 1700 GTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGC 1773
Query 967 -------------------------------------------------------------------------- 966
Sbjct 1774 AGGGGTGCACAGGACGAGTTTTATATGCCATAAGTGTACTGATTGCCTTTGTTGATGTGCCCAGACACAATCCA 1847
Query 967 -------------------------------------------------------------------------- 966
Sbjct 1848 GTCAGTGGGGGATCCCTGGCCCCTCACTTGTCAGTTTCAGGGGTGTCCTACCCTCTGCTTCCTCCTAAATAGTC 1921
Query 967 -------------------------------------------------------------------------- 966
Sbjct 1922 TAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGAAAAAGTCCTGCTGCATTTAAAAGCAAAGTGTCCAAGCTGTC 1995
Query 967 -------------------------------------------------------------------------- 966
Sbjct 1996 CGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGATGCTAATGCCTTTTGGAAGACAGAATGTGTGCA 2069
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2070 ACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGACTCAAGACACCCAAGAGGGACTGTCGTGTTTCTCA 2143
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2144 TAAAAATATCAGTGGGATCGTTTGGGAATTCCATCGGCTTTAGTCTGCCGGTGCAAAACATTTTAACAGTTTTC 2217
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2218 TCAGATCAACAACCGTCTCTGCCACAGCTGTACCCCCTCCCTCCTTAACCACACAAGAGGAGGAGCCACAGGCG 2291
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2292 GGATAACAAAATGCAGATTTAACAACTAGCAACTCTGTCATCTTTTTCTAAAAATGACCAACTGCTGATTACAG 2365
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2366 CTCAAACGGAACCAAATGTTTGCGTTTCTGTTTTTGTTGTCATTTATTTGACAAGTTAGCCTCTATGAGCCAAA 2439
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2440 TAGAGGGGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTGGTGTTGTTATGGAGA 2513
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2514 AGGGTCCAAGCCATAGGCTCACCAGGGTCCTCATTCCCACAAAGCTGCCTTGATACCCAACACTCTAGGCTCTC 2587
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2588 AGGGGCCCGGCAGCCTTCACAGCAGAGGCCTGCCTCAGTGGGCCACGGGTCTCCATGGGCTGAGCCTCCATCCG 2661
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2662 AGAAGCCTGAGGTTGAGTGGTAAGCAGAGGCCCAGCCATCCTTGCTGTGGTGTTTATCCCTCCTTCCTGCCAGG 2735
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2736 TTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTTCCATAGAGGAGGAGAAAATAATTTTTTTCCTAT 2809
Query 967 -------------------------------------------------------------------------- 966
Sbjct 2810 AATTTGTAAAGCTTGTGAAAAAGCCACTATCGTGATTTTTTAAATCAAGTAGTGGGACATTTAAAAAACAATAA 2883
Query 967 ----------------- 966
Sbjct 2884 AGATATTTTCCTAAATA 2900
