Nucleotide Global Alignment

Description

Query:
TRCN0000467565
Subject:
XM_017024467.2
Aligned Length:
3319
Identities:
2246
Gaps:
1067

Alignment

Query    1  ATGCTGCCACTGGGCTCAGAGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGCCACTGGGCTCAGAGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCA  74

Query   75  GGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAAC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAAC  148

Query  149  TGCGGTGCCTGCAGGAGGACTTTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTAT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCGGTGCCTGCAGGAGGACTTTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTAT  222

Query  223  GACGCCGCCTTCGCCCAGGCCAGGGAGTGGGAGGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGC  296
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACGCCGCCTTCGCCCAGGCCAGGGAGTGGGAAGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGC  296

Query  297  AGCTAAGCTGAGGCAGGCGCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCAT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGCTAAGCTGAGGCAGGCGCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCAT  370

Query  371  TCCAGGAGCATCGCCTGGAGCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCAGGAGCATCGCCTGGAGCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAG  444

Query  445  TATGAAAATCTAAAATGGACACTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TATGAAAATCTAAAATGGACACTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGA  518

Query  519  ACTGCTGCTGGAGTTTGAATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ACTGCTGCTGGAGTTTGAATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCA  592

Query  593  ACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCA  666

Query  667  AAGGCTGCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGGCTGCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGG  740

Query  741  GGAGCTCCAGGATCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGC  814
            ||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGAGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGC  814

Query  815  TAACCAGGAAGAAGGAAGAGGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGAT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAACCAGGAAGAAGGAAGAGGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGAT  888

Query  889  GCAGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCAGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCA  962

Query  963  GGCCCACTGCGAGACCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGCCCACTGCGAGACCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGG  1036

Query 1037  ACGCTGCCATTGACCAACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACGCTGCCATTGACCAACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTA  1110

Query 1111  TCTAAGGAGATGGTCTCCAGAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TCTAAGGAGATGGTCTCCAGAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGT  1184

Query 1185  GGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGG  1258

Query 1259  AGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAG  1332

Query 1333  TCAGAGGCCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TCAGAGGCCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGC  1406

Query 1407  GCTACAGGAGCAGGAGGTGGTGCTGAAGGCCATGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGC  1480
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCTACAGGAGCAGGAGGTGGTGCTGAAGGCCGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGC  1480

Query 1481  ATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCC  1554

Query 1555  AGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGA  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGA  1628

Query 1629  GGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG  1702

Query 1703  AGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAG  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAG  1776

Query 1777  TTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCA  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCA  1850

Query 1851  GCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAG  1924

Query 1925  CTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGA  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGA  1998

Query 1999  GTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCT  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCT  2072

Query 2073  CCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGC  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGC  2146

Query 2147  TGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGAC  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  TGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGAC  2220

Query 2221  GCCGTGGCCCTTGGGAGAGAGGTGGGTGACC--------GC---------------------------------  2253
            |||||||||||||||||||||| |..|.|||        ||                                 
Sbjct 2221  GCCGTGGCCCTTGGGAGAGAGG-GCCTCACCAAGAGAGGGCCTATGGAGGCCGAGGACCAGGGGGAGCTTTTCC  2293

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2294  TGCACCTCCGGTCAGTGGCACGTGCCCCCCAGACCTTATCTATGCACCGACTCCAGAGAAAGCTGAAGGAGGCA  2367

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2368  GCCAGAAAAATCATCAGCCTCCGCCTGGAGAAAGAGCAGCTCATCGAGATGGGGAACAGGCTCCGTGCAGAGCT  2441

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2442  GGGCCGACCCGAAAGGTGGCTGTTGCACCACGCCCTCCCTCCTGCCCCTGAGGCCCGGAAGCCAGGCGAGGAGC  2515

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2516  CCAGGAGGCCTTTGGATCGCAGCCCACCTTTGGGACAGGTGCAGCCCCATTTTACATCTCAGGACGCCAAGAGT  2589

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2590  GCCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGACTTGA  2663

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2664  CGCCCTGCAAGGCCCGAAGACACAACACAGCATCCACACGGTGACCTGTAAATCACCTCGGCAGAAAGAAGACA  2737

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2738  GGTCCCCAAAGCCACCCCAGGCTCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTTT  2811

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2812  GCCAGTGGCACCCTCCAGGACATGTGGAGGTTGCTAGACCTGGGATCCAGCCCTTCTGGTGTCACCTCCCAGGG  2885

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2886  TGACTCAACTCCAGAAATGGGGTCTCACTATGTCACCCAGGCTGGTCTCGAACTCCTGGGCTCAAGCAGTCCTG  2959

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 2960  CCGCCTTGGCCTCCCAAAGTGCTGAGATGACAGGTGTGGGCCCCACGCCCAGCCTGGCGTGGAGTGGAGCCCTT  3033

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 3034  CACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACGTGGGCTCCAGGAATGCGAGGGGGAATGAATGG  3107

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 3108  AGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCGGGCCTCACTGGTCACCATCACAGCAGCCTTGCAGTGGGA  3181

Query 2254  --------------------------------------------------------------------------  2253
                                                                                      
Sbjct 3182  TCAGGACAGTCCTGCTGTCCAGGAAGGAGAGGACCCTGCTCTCTTGTTTCTCACTACCTGCTCCTGTCGTTCTA  3255

Query 2254  ---------------------------------------------------------------  2253
                                                                           
Sbjct 3256  GTCCCATTGCTGCTCTCAGGACAAGCTGTGACTGAGAGAGCAGGTCACGCTGGTGACATTTTA  3318

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