Nucleotide Global Alignment
Description
- Query:
- TRCN0000467611
- Subject:
- XM_017008807.1
- Aligned Length:
- 3131
- Identities:
- 739
- Gaps:
- 2386
Alignment
Query 1 ATGTTATGTTGGGGATATTGGTCTCTGGGCCAACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGAGCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCAGGTGTGTGGGTTCATATCTGACAGAAGTGTCAAGGAAGTGGCCTGTGGGGGAAACCACTCTGTGTTCCTGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGGAAGATGGGGAAGTTTACACATGTGGTTTGAACACCAAGGGGCAACTGGGCCATGAGAGGGAAGGAAACAAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CCAGAACAAATTGGAGCTCTGGCAGATCAGCATATCATTCATGTGGCATGTGGCGAGTCCCACAGTCTGGCCCT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAGTGACCGAGGCCAGCTGTTTTCTTGGGGTGCAGGGAGTGATGGTCAGCTAGGACTCATGACTACTGAGGATT 370
||||||||||||||||
Sbjct 1 ----------------------------------------------------------ATGACTACTGAGGATT 16
Query 371 CTGTGGCAGTGCCCAGGTTAATACAAAAGCTGAACCAGCAAACAATATTACAAGTTTCCTGTGGCAACTGGCAT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17 CTGTGGCAGTGCCCAGGTTAATACAAAAGCTGAACCAGCAAACAATATTACAAGTTTCCTGTGGCAACTGGCAT 90
Query 445 TGCTTGGCTCTTGCGGCTGATGGCCAGTTCTTCACCTGGGGAAAGAACAGCCATGGGCAGCTTGGCTTAGGGAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 91 TGCTTGGCTCTTGCGGCTGATGGCCAGTTCTTCACCTGGGGAAAGAACAGCCATGGGCAGCTTGGCTTAGGGAA 164
Query 519 GGAGTTCCCCTCCCAAGCCAGCCCACAGAGGGTGAGGTCCCTGGAGGGGATCCCACTGGCTCAGGTGGCTGCCG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 165 GGAGTTCCCCTCCCAAGCCAGCCCACAGAGGGTGAGGTCCCTGGAGGGGATCCCACTGGCTCAGGTGGCTGCCG 238
Query 593 GAGGGGCTCACAGCTTTGCCCTGTCTCTCTCAGGAGCTGTTTTTGGCTGGGGGATGAATAATGCCGGGCAGCTA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 GAGGGGCTCACAGCTTTGCCCTGTCTCTCTCAGGAGCTGTTTTTGGCTGGGGGATGAATAATGCCGGGCAGCTA 312
Query 667 GGGCTCAGTGATGAAAAAGATCGAGAATCTCCATGCCATGTAAAACTCTTACGCACGCAAAAAGTTGTCTATAT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 313 GGGCTCAGTGATGAAAAAGATCGAGAATCTCCATGCCATGTAAAACTCTTACGCACGCAAAAAGTTGTCTATAT 386
Query 741 TAGTTGTGGAGAAGAACACACAGCAGTTCTCACAAAGAGTGGAGGTGTGTTTACCTTTGGCGCTGGTTCCTGTG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 387 TAGTTGTGGAGAAGAACACACAGCAGTTCTCACAAAGAGTGGAGGTGTGTTTACCTTTGGCGCTGGTTCCTGTG 460
Query 815 GGCAACTTGGACACGACTCCATGAATGATGAGGTTAACCCTAGAAGAGTTCTAGAGCTGATGGGTAGTGAAGTA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 461 GGCAACTTGGACACGACTCCATGAATGATGAGGTTAACCCTAGAAGAGTTCTAGAGCTGATGGGTAGTGAAGTA 534
Query 889 ACTCAAATTGCTTGTGGCAGACAACATACCCTAGCCTTCGTGCCTTCTTCTGGACTCATCTATGCATTTGGTTG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 ACTCAAATTGCTTGTGGCAGACAACATACCCTAGCCTTCGTGCCTTCTTCTGGACTCATCTATGCATTTGGTTG 608
Query 963 TGGAGCAAGAGGTCAATTAGGAACTGGGCACACTTGTAATGTTAAGTGCCCATCTCCTGTCAAGGGTTACTGGG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 609 TGGAGCAAGAGGTCAATTAGGAACTGGGCACACTTGTAATGTTAAGTGCCCATCTCCTGTCAAGGGTTACTGGG 682
Query 1037 CTGCCCACAGTGGCCAGCTTTCAGCCCGAGCT---------------------GGTAAGAATGATTGTCTCTGG 1089
|||||||||||||||||||||||||||||||| |.||||.| |||..|||||||
Sbjct 683 CTGCCCACAGTGGCCAGCTTTCAGCCCGAGCTGATCGCTTTAAATATCATATCGTTAAGCA-GATCTTCTCTGG 755
Query 1090 A-----------ATTTAAAGGTATTT------------------------------------------------ 1104
| .||| |||.||
Sbjct 756 AGGAGACCAGACTTTT----GTACTTTGCTCCAAATACGAGAATTATTCTCCTGCTGTTGACTTCAGGACTATG 825
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 826 AACCAAGCACATTATACCAGTTTAATAAATGATGAAACCATAGCAGTTTGGAGACAAAAACTCTCAGAACACAA 899
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 900 CAATGCAAATACAATCAATGGTGTTGTTCAGATATTATCTTCTGCAGCCTGTTGGAATGGAAGTTTTCTTGAAA 973
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 974 AAAAAATTGATGAACATTTTAAAACGAGTCCCAAAATCCCTGGGATTGACCTGAACTCAACTAGGGTGTTATTT 1047
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1048 GAGAAGTTAATGAACTCTCAGCACTCCATGATTCTAGAACAGATTTTGAACAGTTTTGAAAGTTGTCTGATTCC 1121
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1122 CCAGTTGTCAAGCTCACCACCAGATGTTGAAGCCATGAGAATCTATTTAATACTACCTGAGTTTCCCCTACTCC 1195
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1196 AGGATTCCAAGTATTATATAACATTGACTATTCCCTTGGCTATGGCCATTCTTCGGCTGGATACAAACCCCAGC 1269
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1270 AAAGTACTAGATAACTGGTGGTCTCAGGTATGCCCGAAATATTTCATGAAGCTGGTAAACCTCTATAAAGGTGC 1343
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1344 AGTCCTTTATCTACTGAGGGGAAGAAAGACATTCTTAATTCCCGTACTGTTTAACAATTATATCACAGCAGCTC 1417
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1418 TCAAACTCTTGGAGAAGTTATATAAGGTAAATCTTAAAGTGAAGCATGTGGAATATGATACATTTTACATTCCT 1491
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1492 GAGATTTCCAATCTCGTGGACATTCAGGAAGACTACCTCATGTGGTTCTTGCATCAAGCAGGGATGGATACTGT 1565
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1566 AACACTTTGTTCCTACCCTTTCATCTTTGATGCCCAAGCCAAGACCAAAATGTTACAGACAGATGCTGAACTAC 1639
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1640 AGATGCAGGTGGCAGTCAATGGAGCCAACCTGCAGAATGTCTTCATGCTTCTCACCCTGGAGCCTCTGCTGGCC 1713
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1714 AGAAGCCCCTTCCTGGTCCTTCACGTTCGCAGGAACAACCTTGTTGGAGATGCCCTAAGAGAGCTGAGCATTCA 1787
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1788 TTCTGATATTGATTTGAAAAAGCCTCTCAAAGTAATCTTTGATGGTGAAGAAGCAGTGGATGCCGGTGGTGTTA 1861
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1862 CAAAGGAATTTTTTCTTTTGCTGTTAAAAGAACTTTTGAATCCCATCTATGGAATGTTTACCTACTATCAAGAT 1935
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1936 TCAAATCTCTTGTGGTTTTCAGACACGTGTTTTGTAGAGCACAACTGGTTTCACTTGATTGGTATAACCTGTGG 2009
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2010 ACTAGCTATCTACAACTCCACTGTGGTCGATCTCCACTTCCCATTGGCTCTCTACAAGAAGTTACTCAATGTAA 2083
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2084 AGCCTGGCTTGGAAGACTTAAAGGAGTTGTCACCCACTGAAGGAAGGAGTCTCCAAGAGCTTTTAGATTACCCC 2157
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2158 GGGGAGGATGTGGAGGAGACTTTCTGCCTCAACTTCACGATCTGCCGAGAAAGCTATGGAGTGATTGAACAGAA 2231
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2232 GAAGCTGATACCTGGGGGAGATAATGTAACTGTGTGCAAGGATAACAGGCAGGAATTTGTGGATGCTTATGTGA 2305
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2306 ATTATGTCTTCCAAATCTCAGTTCATGAATGGTACACAGCCTTCTCTAGTGGCTTCCTAAAGGTGTGTGGTGGC 2379
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2380 AAAGTACTTGAGCTCTTCCAGCCTTCAGAACTGAGGGCTATGATGGTGGGGAACAGCAACTACAACTGGGAAGA 2453
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2454 ACTGGAAGAGACTGCCATCTACAAGGGAGATTACTCGGCCACACATCCCACTGTAAAACTATTTTGGGAAACAT 2527
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2528 TTCATGAGTTTCCATTGGAAAAGAAGAAGAAGTTTCTCTTGTTCCTGACAGGCAGCGATCGGATTCCCATCTAC 2601
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2602 GGCATGGCCAGTCTGCAGATTGTCATCCAGTCCACAGCCAGCGGGGAGGAGTACTTGCCGGTGGCCCACACTTG 2675
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2676 CTACAACCTTCTTGACCTCCCCAAGTACAGCAGCAAAGAGATTCTGAGTGCCCGGCTGACCCAGGCCCTTGACA 2749
Query 1105 ----------------------- 1104
Sbjct 2750 ACTATGAAGGGTTTAGTTTGGCC 2772
