Nucleotide Global Alignment
Description
- Query:
- TRCN0000467625
- Subject:
- XM_006710477.3
- Aligned Length:
- 4973
- Identities:
- 2559
- Gaps:
- 2402
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGAAACGGAGGCAAGAGAGACTGGGAGCACCATGTCTGCGGATTCATTGTCGGACAAGTAACCGCAAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTGATTGTGACCTCTAGCACATCACCTACACTACCACGGCCACACTCACCACTCCATGGCCACACAGGTAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCCTTTGGACAGCCCCCGGAATTTCTCTCCAAATGCACCTGCTCACTTTTCTTTTGTTCCTGCCCGTAGCCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCACAGAGCTGACAGGACTGATGGGCGGCGCTGGTCTTTGGCCTCTTTGCCCTCTTCAGGATATGGAACTAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACTCCTAGCTCCACTGTCTCATCATCATGCTCCTCACAGGAAAAGCTGCATCAGTTGCCTTTCCAGCCTACAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGATGAGCTGCACTTTTTGACGAAGCATTTCAGCACAGAGAGCGTACCAGATGAGGAAGGACGGCAGTCCCCA 444
Query 1 ---ATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGACGATCCCCAGTATCCTTTGACAGTGAAATAATAATGAT 71
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGACGATCCCCAGTATCCTTTGACAGTGAAATAATAATGAT 518
Query 72 GAATCATGTTTACAAAGAAAGATTCCCAAAGGCCACCGCACAAATGGAAGAGCGACTAGCAGAGTTTATTTCCT 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAATCATGTTTACAAAGAAAGATTCCCAAAGGCCACCGCACAAATGGAAGAGCGACTAGCAGAGTTTATTTCCT 592
Query 146 CCAACACTCCAGACAGCGTGCTGCCCTTGGCAGATGGAGCCCTGAGCTTTATTCATCATCAGGTGATTGAGATG 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCAACACTCCAGACAGCGTGCTGCCCTTGGCAGATGGAGCCCTGAGCTTTATTCATCATCAGGTGATTGAGATG 666
Query 220 GCCCGAGACTGCCTGGATAAATCTCGGAGTGGCCTCATTACATCACAATACTTCTACGAACTTCAAGATAATTT 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCCCGAGACTGCCTGGATAAATCTCGGAGTGGCCTCATTACATCACAATACTTCTACGAACTTCAAGATAATTT 740
Query 294 GGAGAAACTTTTACAAGATGCTCATGAGCGCTCAGAGAGCTCAGAAGTGGCTTTTGTGATGCAGCTGGTGAAAA 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAGAAACTTTTACAAGATGCTCATGAGCGCTCAGAGAGCTCAGAAGTGGCTTTTGTGATGCAGCTGGTGAAAA 814
Query 368 AGCTGATGATTATCATTGCCCGCCCAGCACGTCTCCTGGAATGCCTGGAGTTTGACCCTGAAGAGTTCTACCAC 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCTGATGATTATCATTGCCCGCCCAGCACGTCTCCTGGAATGCCTGGAGTTTGACCCTGAAGAGTTCTACCAC 888
Query 442 CTTTTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGACATTCCCCGCTACATCGTTAG 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTTTTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGACATTCCCCGCTACATCGTTAG 962
Query 516 CCAGCTGGGCCTCACCCGGGATCCCCTAGAAGAAATGGCCCAGTTGAGCAGCTGTGACAGTCCTGACACTCCAG 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCAGCTGGGCCTCACCCGGGATCCCCTAGAAGAAATGGCCCAGTTGAGCAGCTGTGACAGTCCTGACACTCCAG 1036
Query 590 AGACAGATGATTCTATTGAGGGCCATGGGGCATCTCTGCCATCTAAAAAGACACCCTCTGAAGAGGACTTCGAG 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGACAGATGATTCTATTGAGGGCCATGGGGCATCTCTGCCATCTAAAAAGACACCCTCTGAAGAGGACTTCGAG 1110
Query 664 ACCATTAAGCTCATCAGCAATGGCG-CTATGGGGCTGTATTTCTGGTGCGGCACAAGTCCACCCGGCAGCGC-T 735
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1111 ACCATTAAGCTCATCAGCAATGGCGCCTATGGGGCTGTATTTCTGGTGCGGCACAAGTCCACCCGGCAGCGCTT 1184
Query 736 TGCCATGA--GAGATC-ACAAGCAG-ACTTGAT-CTACGGA--CAGAT-CAGCAGGCTTTCGT-GAGCGTGACA 800
|||||||| .||||| |||||||| ||.|||| ||||||| ||||| ||||||||.||||| ||||||||||
Sbjct 1185 TGCCATGAAGAAGATCAACAAGCAGAACCTGATCCTACGGAACCAGATCCAGCAGGCCTTCGTGGAGCGTGACA 1258
Query 801 TACTGAC-TTCGCTGAGAACCCCTTGGTGGTCAGCATGTTCTGCTCCTTTGATACCAAGCGCCACTTGTGCATG 873
||||||| |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TACTGACTTTCGCTGAGAACCCCTTTGTGGTCAGCATGTTCTGCTCCTTTGATACCAAGCGCCACTTGTGCATG 1332
Query 874 GTGATGGAGTACGTTGAAGGGGGAGACTGTGCCACTCTGCTGAAGAATATTGGGGCCCTGCCTGTGGACATGGT 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTGATGGAGTACGTTGAAGGGGGAGACTGTGCCACTCTGCTGAAGAATATTGGGGCCCTGCCTGTGGACATGGT 1406
Query 948 GCGTCTATACTTTGCGGAAACTGTGCTGGCCCTGGAGTACTTACACAACTATGGCATCGTGCACCGTGACCTCA 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCGTCTATACTTTGCGGAAACTGTGCTGGCCCTGGAGTACTTACACAACTATGGCATCGTGCACCGTGACCTCA 1480
Query 1022 AGCCTGACAACCTCCTAATTACATCCATGGGGCACATCAAGCTCACGGACTTTGGACTGTCCAAAATGGGCCTC 1095
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1481 AGCCTGACAACCTCCTAATTACATCCATGGGGCACATCAAGCTCACGGACTTTGGACTGTCCAAAATTGGCCTC 1554
Query 1096 ATGAGTCTGACAACGAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGAATTCCTGGACAAGCAGGTATG 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATGAGTCTGACAACGAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGAATTCCTGGACAAGCAGGTATG 1628
Query 1170 CGGGACCCCAGAATACATTGCGCCTGAGGTGATCCTGCGCCAGGGCTATGGGAAGCCAGTGGACTGGTGGGCCA 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CGGGACCCCAGAATACATTGCGCCTGAGGTGATCCTGCGCCAGGGCTATGGGAAGCCAGTGGACTGGTGGGCCA 1702
Query 1244 TGGGCATTATCCTGTATGAGTTCCTGGTGGGCTGCGTCCCTTTTTTTGGAGATACTCCGGAGGAGCTCTTTGGG 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TGGGCATTATCCTGTATGAGTTCCTGGTGGGCTGCGTCCCTTTTTTTGGAGATACTCCGGAGGAGCTCTTTGGG 1776
Query 1318 CAGGTGATCAGTGATGAGATTGTGTGGCCTGAGGGTGATGAGGCACTGCCCCCAGACGCCCAGGACCTCACCTC 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CAGGTGATCAGTGATGAGATTGTGTGGCCTGAGGGTGATGAGGCACTGCCCCCAGACGCCCAGGACCTCACCTC 1850
Query 1392 CAAACTGCTCCACCAGAACCCTCTGGAGAGACTTGGCACAGGCAGTGCCTATGAGGTGAAGCAGCACCCATTCT 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CAAACTGCTCCACCAGAACCCTCTGGAGAGACTTGGCACAGGCAGTGCCTATGAGGTGAAGCAGCACCCATTCT 1924
Query 1466 TTACTGGTCTGGACTGGACAGGACTTCTCCGCCAGAAGGCTGAATTTATTCCTCAGTTGGAGTCAGAGGATGAT 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TTACTGGTCTGGACTGGACAGGACTTCTCCGCCAGAAGGCTGAATTTATTCCTCAGTTGGAGTCAGAGGATGAT 1998
Query 1540 ACTAGCTATTTTGACACCCGCTCAGAGCGATACCACCACATGGACTCGGAGGATGAGGAAGAAGTGAGTGAGGA 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 ACTAGCTATTTTGACACCCGCTCAGAGCGATACCACCACATGGACTCGGAGGATGAGGAAGAAGTGAGTGAGGA 2072
Query 1614 TGGCTGCCTTGAGATCCGCCAGTTCTCTTCCTGCTCTCCAAGGTTCAACAAGGTGTACAGCAGCATGGAGCGGC 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGGCTGCCTTGAGATCCGCCAGTTCTCTTCCTGCTCTCCAAGGTTCAACAAGGTGTACAGCAGCATGGAGCGGC 2146
Query 1688 TCTCACTGCTCGAGGAGCGCCGGACACCACCCCCGACCAAGCGCAGCCTGAGTGAGGAGAAGGAGGACCATTCG 1761
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 2147 TCTCACTGCTCGAGGAGCGCCGGACACCACCCCCGACCAAGCGCAGCCTGAGTGAGGAGAAGGAGGACCATTCA 2220
Query 1762 GATGGCCTGGCAGGGCTCAAAGGCCGAGA-CGGAGGCTGGGTGATTGGCTCCCCTGAGATTATTACGGAAGCGG 1834
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 2221 GATGGCCTGGCAGGGCTCAAAGGCCGAGACCGGA-GCTGGGTGATTGGCTCCCCTGAGA-TATTACGGAAGCGG 2292
Query 1835 CTGTCGGTGTCTGAGTCGTCCCANCACAGAGAGTGACTCAAGCCCTCCAATGAACA-TGCGACGCCGCTGCTCA 1907
|||||||||||||||||.||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 2293 CTGTCGGTGTCTGAGTCATCCCA-CACAGAGAGTGACTCAAGCCCTCCAATG-ACAGTGCGACGCCGCTGCTCA 2364
Query 1908 GGCTTCCTGGATGCGCCTCGGTTCCCGGAGGGCCNTGAGGAGCCCAGCAGCACCCNTCAGGAGGCAACCACAGG 1981
|||.||||||||||||||||||||||||||||||.|||||||.|||||||||||| ||||||||||||||||||
Sbjct 2365 GGCCTCCTGGATGCGCCTCGGTTCCCGGAGGGCCCTGAGGAGGCCAGCAGCACCC-TCAGGAGGCAACCACAGG 2437
Query 1982 AGGGTATATGGGTCCTGACACCCCCCATTCT-GAGAGGGGGTATCTGGGCCTGTCACTGAACACTCNAGGGGAG 2054
||||||||||||||||||||||||| .||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 2438 AGGGTATATGGGTCCTGACACCCCC--ATCTGGAGAGGGGGTATCTGGGCCTGTCACTGAACACTC-AGGGGAG 2508
Query 2055 CAGCGGCCAAAGCTGGATGAGGAAGCTGTTGGCCGGAGCAGTGGTTCCAGTCCAGCTATGGAGACCCGAGGCCG 2128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2509 CAGCGGCCAAAGCTGGATGAGGAAGCTGTTGGCCGGAGCAGTGGTTCCAGTCCAGCTATGGAGACCCGAGGCCG 2582
Query 2129 TGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCAAGGCCATCAGTGACCTGGCTGTGCGTAGGGCCCGCCACC 2202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2583 TGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCAAGGCCATCAGTGACCTGGCTGTGCGTAGGGCCCGCCACC 2656
Query 2203 GGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACTGCTCGCCCTGTCAACAAAGTGATCAAGTCCGCCTCAGCC 2276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2657 GGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACTGCTCGCCCTGTCAACAAAGTGATCAAGTCCGCCTCAGCC 2730
Query 2277 ACAGCCCTCTCACTCCTCATTCCTTCGGAACACCACACCTGCTCCCCGTTGGCCAGCCCCATGTCCCCACATTC 2350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2731 ACAGCCCTCTCACTCCTCATTCCTTCGGAACACCACACCTGCTCCCCGTTGGCCAGCCCCATGTCCCCACATTC 2804
Query 2351 TCAGTCGTCCAACCCATCATCCCGGGACTCTTCTC--------------------------------------- 2385
|||||||||||||||||||||||||||||||||||
Sbjct 2805 TCAGTCGTCCAACCCATCATCCCGGGACTCTTCTCCAAGCAGGGACTTCTTGCCAGCCCTTGGCAGCATGAGGC 2878
Query 2386 -------------------------CAAGAAGTATGGCTTCACCCTGCGGGCCATTCGCGTCTACATGGGTGAC 2434
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2879 CTCCCATCATCATCCACCGAGCTGGCAAGAAGTATGGCTTCACCCTGCGGGCCATTCGCGTCTACATGGGTGAC 2952
Query 2435 TCCGATGTCTACACCGTGCACCATATGGTGTGGCACGTGGAGGATGGAGGTCCGGCCAGTGAGGCAGGGCTTCG 2508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2953 TCCGATGTCTACACCGTGCACCATATGGTGTGGCACGTGGAGGATGGAGGTCCGGCCAGTGAGGCAGGGCTTCG 3026
Query 2509 TCAAGGTGACCTCATCACCCATGTCAATGGGGAACCTGTGCATGGCCTGGTGCACACGGAGGTGGTGGAGC--- 2579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 3027 TCAAGGTGACCTCATCACCCATGTCAATGGGGAACCTGTGCATGGCCTGGTGCACACGGAGGTGGTAGAGCTGA 3100
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3101 TCCTGAAGAGTGGAAACAAGGTGGCCATTTCAACAACTCCCCTGGAGAACACATCCATTAAAGTGGGGCCAGCT 3174
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3175 CGGAAGGGCAGCTACAAGGCCAAGATGGCCCGAAGGAGCAAGAGGAGCCGCGGCAAGGATGGGCAAGAAAGCAG 3248
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3249 AAAAAGGAGCTCCCTGTTCCGCAAGATCACCAAGCAAGCATCCCTGCTCCACACCAGCCGCAGCCTTTCTTCCC 3322
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3323 TTAACCGCTCCTTGTCATCAGGGGAGAGTGGGCCAGGCTCTCCCACACACAGCCACAGCCTTTCCCCCCGATCT 3396
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3397 CCCACTCAAGGCTACCGGGTGACCCCCGATGCTGTGCATTCAGTGGGAGGGAATTCATCACAGAGCAGCTCCCC 3470
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3471 CAGCTCCAGCGTGCCCAGTTCCCCAGCCGGCTCTGGGCACACACGGCCCAGCTCCCTCCACGGTCTGGCACCCA 3544
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3545 AGCTCCAACGCCAGTACCGCTCTCCACGGCGCAAGTCAGCAGGCAGCATCCCACTGTCACCACTGGCCCACACC 3618
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3619 CCTTCTCCCCCACCCCCAACAGCTTCACCTCAGCGGTCCCCATCGCCCCTGTCTGGCCATGTAGCCCAGGCCTT 3692
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3693 TCCCACAAAGCTTCACTTGTCACCTCCCCTGGGCAGGCAACTCTCACGGCCCAAGAGTGCGGAGCCACCCCGTT 3766
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3767 CACCACTACTCAAGAGGGTGCAGTCGGCTGAGAAACTGGCAGCAGCACTTGCCGCCTCTGAGAAGAAGCTAGCC 3840
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3841 ACTTCTCGCAAGCACAGCCTTGACCTGCCCCACTCTGAACTAAAGAAGGAACTGCCGCCCAGGGAAGTGAGCCC 3914
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3915 TCTGGAGGTAGTTGGAGCCAGGAGTGTGCTGTCTGGCAAGGGGGCCCTGCCAGGGAAGGGGGTGCTGCAGCCTG 3988
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3989 CTCCCTCACGGGCCCTAGGCACCCTCCGGCAGGACCGAGCCGAACGACGGGAGTCGCTGCAGAAGCAAGAAGCC 4062
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4063 ATTCGTGAGGTGGACTCCTCAGAGGACGACACCGAGGAAGGGCCTGAGAACAGCCAGGGTGCACAGGAGCTGAG 4136
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4137 CTTGGCACCTCACCCAGAAGTGAGCCAGAGTGTGGCCCCTAAAGGAGCAGGAGAGAGTGGGGAAGAGGATCCTT 4210
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4211 TCCCGTCCAGAGACCCTAGGAGCCTGGGCCCAATGGTCCCAAGCCTATTGACAGGGATCACACTGGGGCCTCCC 4284
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4285 AGAATGGAAAGTCCCAGTGGTCCCCACAGGAGGCTCGGGAGCCCACAAGCCATTGAGGAGGCTGCCAGCTCCTC 4358
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4359 CTCAGCAGGCCCCAACCTAGGTCAGTCTGGAGCCACAGACCCCATCCCTCCTGAAGGTTGCTGGAAGGCCCAGC 4432
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4433 ACCTCCACACCCAGGCACTAACAGCACTTTCTCCCAGCACTTCGGGACTCACCCCCACCAGCAGTTGCTCTCCT 4506
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4507 CCCAGCTCCACCTCTGGGAAGCTGAGCATGTGGTCCTGGAAATCCCTTATTGAGGGCCCAGACAGGGCATCCCC 4580
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4581 AAGCAGAAAGGCAACCATGGCAGGTGGGCTAGCCAACCTCCAGGATTTGGAAAACACAACTCCAGCCCAGCCTA 4654
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4655 AGAACCTGTCTCCCAGGGAGCAGGGGAAGACACAGCCACCTAGTGCCCCCAGACTGGCCCATCCATCTTATGAG 4728
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4729 GATCCCAGCCAGGGCTGGCTATGGGAGTCTGAGTGTGCACAAGCAGTGAAAGAGGATCCAGCCCTGAGCATCAC 4802
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4803 CCAAGTGCCTGATGCCTCAGGTGACAGAAGGCAGGACGTTCCATGCCGAGGCTGCCCCCTCACCCAGAAGTCTG 4876
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4877 AGCCCAGCCTCAGGAGGGGCCAAGAACCAGGGGGCCATCAAAAGCATCGGGATTTGGCATTGGTTCCAGATGAG 4950
Query 2580 --------------- 2579
Sbjct 4951 CTTTTAAAGCAAACA 4965
