Nucleotide Global Alignment
Description
- Query:
- TRCN0000467625
- Subject:
- XM_011541067.2
- Aligned Length:
- 4937
- Identities:
- 2559
- Gaps:
- 2366
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACCATGGCGAGTTGTCGGACAAGTAACCGCAAGAGCTTGATTGTGACCTCTAGCACATCACCTACACTACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACGGCCACACTCACCACTCCATGGCCACACAGGTAACAGTCCTTTGGACAGCCCCCGGAATTTCTCTCCAAATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACCTGCTCACTTTTCTTTTGTTCCTGCCCGTAGCCATAGCCACAGAGCTGACAGGACTGATGGGCGGCGCTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTTTGGCCTCTTTGCCCTCTTCAGGATATGGAACTAACACTCCTAGCTCCACTGTCTCATCATCATGCTCCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACAGGAAAAGCTGCATCAGTTGCCTTTCCAGCCTACAGCTGATGAGCTGCACTTTTTGACGAAGCATTTCAGCA 370
Query 1 -----------------------------------------ATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGA 33
|||||||||||||||||||||||||||||||||
Sbjct 371 CAGAGAGCGTACCAGATGAGGAAGGACGGCAGTCCCCAGCCATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGA 444
Query 34 CGATCCCCAGTATCCTTTGACAGTGAAATAATAATGATGAATCATGTTTACAAAGAAAGATTCCCAAAGGCCAC 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGATCCCCAGTATCCTTTGACAGTGAAATAATAATGATGAATCATGTTTACAAAGAAAGATTCCCAAAGGCCAC 518
Query 108 CGCACAAATGGAAGAGCGACTAGCAGAGTTTATTTCCTCCAACACTCCAGACAGCGTGCTGCCCTTGGCAGATG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGCACAAATGGAAGAGCGACTAGCAGAGTTTATTTCCTCCAACACTCCAGACAGCGTGCTGCCCTTGGCAGATG 592
Query 182 GAGCCCTGAGCTTTATTCATCATCAGGTGATTGAGATGGCCCGAGACTGCCTGGATAAATCTCGGAGTGGCCTC 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGCCCTGAGCTTTATTCATCATCAGGTGATTGAGATGGCCCGAGACTGCCTGGATAAATCTCGGAGTGGCCTC 666
Query 256 ATTACATCACAATACTTCTACGAACTTCAAGATAATTTGGAGAAACTTTTACAAGATGCTCATGAGCGCTCAGA 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATTACATCACAATACTTCTACGAACTTCAAGATAATTTGGAGAAACTTTTACAAGATGCTCATGAGCGCTCAGA 740
Query 330 GAGCTCAGAAGTGGCTTTTGTGATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCCGCCCAGCACGTCTCC 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAGCTCAGAAGTGGCTTTTGTGATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCCGCCCAGCACGTCTCC 814
Query 404 TGGAATGCCTGGAGTTTGACCCTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGA 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGAATGCCTGGAGTTTGACCCTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGA 888
Query 478 CAAGGGATTAAATGTGACATTCCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGATCCCCTAGAAGAAAT 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAAGGGATTAAATGTGACATTCCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGATCCCCTAGAAGAAAT 962
Query 552 GGCCCAGTTGAGCAGCTGTGACAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGGGCCATGGGGCATCTC 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGCCCAGTTGAGCAGCTGTGACAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGGGCCATGGGGCATCTC 1036
Query 626 TGCCATCTAAAAAGACACCCTCTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAATGGCG-CTATGGGGCT 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1037 TGCCATCTAAAAAGACACCCTCTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAATGGCGCCTATGGGGCT 1110
Query 699 GTATTTCTGGTGCGGCACAAGTCCACCCGGCAGCGC-TTGCCATGA--GAGATC-ACAAGCAG-ACTTGAT-CT 766
|||||||||||||||||||||||||||||||||||| ||||||||| .||||| |||||||| ||.|||| ||
Sbjct 1111 GTATTTCTGGTGCGGCACAAGTCCACCCGGCAGCGCTTTGCCATGAAGAAGATCAACAAGCAGAACCTGATCCT 1184
Query 767 ACGGA--CAGAT-CAGCAGGCTTTCGT-GAGCGTGACATACTGAC-TTCGCTGAGAACCCCTTGGTGGTCAGCA 835
||||| ||||| ||||||||.||||| ||||||||||||||||| |||||||||||||||||.||||||||||
Sbjct 1185 ACGGAACCAGATCCAGCAGGCCTTCGTGGAGCGTGACATACTGACTTTCGCTGAGAACCCCTTTGTGGTCAGCA 1258
Query 836 TGTTCTGCTCCTTTGATACCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGGGGAGACTGTGCCACT 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGTTCTGCTCCTTTGATACCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGGGGAGACTGTGCCACT 1332
Query 910 CTGCTGAAGAATATTGGGGCCCTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAACTGTGCTGGCCCTGGA 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTGCTGAAGAATATTGGGGCCCTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAACTGTGCTGGCCCTGGA 1406
Query 984 GTACTTACACAACTATGGCATCGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTACATCCATGGGGCACA 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GTACTTACACAACTATGGCATCGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTACATCCATGGGGCACA 1480
Query 1058 TCAAGCTCACGGACTTTGGACTGTCCAAAATGGGCCTCATGAGTCTGACAACGAACTTGTATGAGGGTCATATT 1131
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCAAGCTCACGGACTTTGGACTGTCCAAAATTGGCCTCATGAGTCTGACAACGAACTTGTATGAGGGTCATATT 1554
Query 1132 GAAAAGGATGCCCGGGAATTCCTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGCGCCTGAGGTGATCCT 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAAAAGGATGCCCGGGAATTCCTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGCGCCTGAGGTGATCCT 1628
Query 1206 GCGCCAGGGCTATGGGAAGCCAGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGTTCCTGGTGGGCTGCG 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCGCCAGGGCTATGGGAAGCCAGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGTTCCTGGTGGGCTGCG 1702
Query 1280 TCCCTTTTTTTGGAGATACTCCGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATTGTGTGGCCTGAGGGT 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCCCTTTTTTTGGAGATACTCCGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATTGTGTGGCCTGAGGGT 1776
Query 1354 GATGAGGCACTGCCCCCAGACGCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCCTCTGGAGAGACTTGG 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GATGAGGCACTGCCCCCAGACGCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCCTCTGGAGAGACTTGG 1850
Query 1428 CACAGGCAGTGCCTATGAGGTGAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAGGACTTCTCCGCCAGA 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CACAGGCAGTGCCTATGAGGTGAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAGGACTTCTCCGCCAGA 1924
Query 1502 AGGCTGAATTTATTCCTCAGTTGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGCTCAGAGCGATACCAC 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGGCTGAATTTATTCCTCAGTTGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGCTCAGAGCGATACCAC 1998
Query 1576 CACATGGACTCGGAGGATGAGGAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCAGTTCTCTTCCTGCTC 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CACATGGACTCGGAGGATGAGGAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCAGTTCTCTTCCTGCTC 2072
Query 1650 TCCAAGGTTCAACAAGGTGTACAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCCGGACACCACCCCCGA 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TCCAAGGTTCAACAAGGTGTACAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCCGGACACCACCCCCGA 2146
Query 1724 CCAAGCGCAGCCTGAGTGAGGAGAAGGAGGACCATTCGGATGGCCTGGCAGGGCTCAAAGGCCGAGA-CGGAGG 1796
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||| |||| |
Sbjct 2147 CCAAGCGCAGCCTGAGTGAGGAGAAGGAGGACCATTCAGATGGCCTGGCAGGGCTCAAAGGCCGAGACCGGA-G 2219
Query 1797 CTGGGTGATTGGCTCCCCTGAGATTATTACGGAAGCGGCTGTCGGTGTCTGAGTCGTCCCANCACAGAGAGTGA 1870
||||||||||||||||||||||| |||||||||||||||||||||||||||||||.||||| ||||||||||||
Sbjct 2220 CTGGGTGATTGGCTCCCCTGAGA-TATTACGGAAGCGGCTGTCGGTGTCTGAGTCATCCCA-CACAGAGAGTGA 2291
Query 1871 CTCAAGCCCTCCAATGAACA-TGCGACGCCGCTGCTCAGGCTTCCTGGATGCGCCTCGGTTCCCGGAGGGCCNT 1943
|||||||||||||||| ||| ||||||||||||||||||||.||||||||||||||||||||||||||||||.|
Sbjct 2292 CTCAAGCCCTCCAATG-ACAGTGCGACGCCGCTGCTCAGGCCTCCTGGATGCGCCTCGGTTCCCGGAGGGCCCT 2364
Query 1944 GAGGAGCCCAGCAGCACCCNTCAGGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCCCATTCT-GAGA 2016
||||||.|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| .||| ||||
Sbjct 2365 GAGGAGGCCAGCAGCACCC-TCAGGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCC--ATCTGGAGA 2435
Query 2017 GGGGGTATCTGGGCCTGTCACTGAACACTCNAGGGGAGCAGCGGCCAAAGCTGGATGAGGAAGCTGTTGGCCGG 2090
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2436 GGGGGTATCTGGGCCTGTCACTGAACACTC-AGGGGAGCAGCGGCCAAAGCTGGATGAGGAAGCTGTTGGCCGG 2508
Query 2091 AGCAGTGGTTCCAGTCCAGCTATGGAGACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCAA 2164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2509 AGCAGTGGTTCCAGTCCAGCTATGGAGACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCAA 2582
Query 2165 GGCCATCAGTGACCTGGCTGTGCGTAGGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACTG 2238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2583 GGCCATCAGTGACCTGGCTGTGCGTAGGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACTG 2656
Query 2239 CTCGCCCTGTCAACAAAGTGATCAAGTCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGAACACCAC 2312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2657 CTCGCCCTGTCAACAAAGTGATCAAGTCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGAACACCAC 2730
Query 2313 ACCTGCTCCCCGTTGGCCAGCCCCATGTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACTCTTCTC- 2385
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2731 ACCTGCTCCCCGTTGGCCAGCCCCATGTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACTCTTCTCC 2804
Query 2386 ---------------------------------------------------------------CAAGAAGTATG 2396
|||||||||||
Sbjct 2805 AAGCAGGGACTTCTTGCCAGCCCTTGGCAGCATGAGGCCTCCCATCATCATCCACCGAGCTGGCAAGAAGTATG 2878
Query 2397 GCTTCACCCTGCGGGCCATTCGCGTCTACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGTGTGGCAC 2470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2879 GCTTCACCCTGCGGGCCATTCGCGTCTACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGTGTGGCAC 2952
Query 2471 GTGGAGGATGGAGGTCCGGCCAGTGAGGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATGGGGAACC 2544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2953 GTGGAGGATGGAGGTCCGGCCAGTGAGGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATGGGGAACC 3026
Query 2545 TGTGCATGGCCTGGTGCACACGGAGGTGGTGGAGC--------------------------------------- 2579
||||||||||||||||||||||||||||||.||||
Sbjct 3027 TGTGCATGGCCTGGTGCACACGGAGGTGGTAGAGCTGATCCTGAAGAGTGGAAACAAGGTGGCCATTTCAACAA 3100
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3101 CTCCCCTGGAGAACACATCCATTAAAGTGGGGCCAGCTCGGAAGGGCAGCTACAAGGCCAAGATGGCCCGAAGG 3174
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3175 AGCAAGAGGAGCCGCGGCAAGGATGGGCAAGAAAGCAGAAAAAGGAGCTCCCTGTTCCGCAAGATCACCAAGCA 3248
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3249 AGCATCCCTGCTCCACACCAGCCGCAGCCTTTCTTCCCTTAACCGCTCCTTGTCATCAGGGGAGAGTGGGCCAG 3322
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3323 GCTCTCCCACACACAGCCACAGCCTTTCCCCCCGATCTCCCACTCAAGGCTACCGGGTGACCCCCGATGCTGTG 3396
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3397 CATTCAGTGGGAGGGAATTCATCACAGAGCAGCTCCCCCAGCTCCAGCGTGCCCAGTTCCCCAGCCGGCTCTGG 3470
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3471 GCACACACGGCCCAGCTCCCTCCACGGTCTGGCACCCAAGCTCCAACGCCAGTACCGCTCTCCACGGCGCAAGT 3544
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3545 CAGCAGGCAGCATCCCACTGTCACCACTGGCCCACACCCCTTCTCCCCCACCCCCAACAGCTTCACCTCAGCGG 3618
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3619 TCCCCATCGCCCCTGTCTGGCCATGTAGCCCAGGCCTTTCCCACAAAGCTTCACTTGTCACCTCCCCTGGGCAG 3692
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3693 GCAACTCTCACGGCCCAAGAGTGCGGAGCCACCCCGTTCACCACTACTCAAGAGGGTGCAGTCGGCTGAGAAAC 3766
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3767 TGGCAGCAGCACTTGCCGCCTCTGAGAAGAAGCTAGCCACTTCTCGCAAGCACAGCCTTGACCTGCCCCACTCT 3840
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3841 GAACTAAAGAAGGAACTGCCGCCCAGGGAAGTGAGCCCTCTGGAGGTAGTTGGAGCCAGGAGTGTGCTGTCTGG 3914
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3915 CAAGGGGGCCCTGCCAGGGAAGGGGGTGCTGCAGCCTGCTCCCTCACGGGCCCTAGGCACCCTCCGGCAGGACC 3988
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3989 GAGCCGAACGACGGGAGTCGCTGCAGAAGCAAGAAGCCATTCGTGAGGTGGACTCCTCAGAGGACGACACCGAG 4062
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4063 GAAGGGCCTGAGAACAGCCAGGGTGCACAGGAGCTGAGCTTGGCACCTCACCCAGAAGTGAGCCAGAGTGTGGC 4136
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4137 CCCTAAAGGAGCAGGAGAGAGTGGGGAAGAGGATCCTTTCCCGTCCAGAGACCCTAGGAGCCTGGGCCCAATGG 4210
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4211 TCCCAAGCCTATTGACAGGGATCACACTGGGGCCTCCCAGAATGGAAAGTCCCAGTGGTCCCCACAGGAGGCTC 4284
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4285 GGGAGCCCACAAGCCATTGAGGAGGCTGCCAGCTCCTCCTCAGCAGGCCCCAACCTAGGTCAGTCTGGAGCCAC 4358
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4359 AGACCCCATCCCTCCTGAAGGTTGCTGGAAGGCCCAGCACCTCCACACCCAGGCACTAACAGCACTTTCTCCCA 4432
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4433 GCACTTCGGGACTCACCCCCACCAGCAGTTGCTCTCCTCCCAGCTCCACCTCTGGGAAGCTGAGCATGTGGTCC 4506
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4507 TGGAAATCCCTTATTGAGGGCCCAGACAGGGCATCCCCAAGCAGAAAGGCAACCATGGCAGGTGGGCTAGCCAA 4580
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4581 CCTCCAGGATTTGGAAAACACAACTCCAGCCCAGCCTAAGAACCTGTCTCCCAGGGAGCAGGGGAAGACACAGC 4654
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4655 CACCTAGTGCCCCCAGACTGGCCCATCCATCTTATGAGGATCCCAGCCAGGGCTGGCTATGGGAGTCTGAGTGT 4728
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4729 GCACAAGCAGTGAAAGAGGATCCAGCCCTGAGCATCACCCAAGTGCCTGATGCCTCAGGTGACAGAAGGCAGGA 4802
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4803 CGTTCCATGCCGAGGCTGCCCCCTCACCCAGAAGTCTGAGCCCAGCCTCAGGAGGGGCCAAGAACCAGGGGGCC 4876
Query 2580 ----------------------------------------------------- 2579
Sbjct 4877 ATCAAAAGCATCGGGATTTGGCATTGGTTCCAGATGAGCTTTTAAAGCAAACA 4929
