Nucleotide Global Alignment
Description
- Query:
- TRCN0000467625
- Subject:
- XM_011541068.1
- Aligned Length:
- 4916
- Identities:
- 2559
- Gaps:
- 2345
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACCATGGCGAGTTGTCGGACAAGTAACCGCAAGAGCTTGATTGTGACCTCTAGCACATCACCTACACTACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACGGCCACACTCACCACTCCATGGCCACACAGGTAACAGTCCTTTGGACAGCCCCCGGAATTTCTCTCCAAATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACCTGCTCACTTTTCTTTTGTTCCTGCCCGTAGGACTGATGGGCGGCGCTGGTCTTTGGCCTCTTTGCCCTCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCAGGATATGGAACTAACACTCCTAGCTCCACTGTCTCATCATCATGCTCCTCACAGGAAAAGCTGCATCAGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCTTTCCAGCCTACAGCTGATGAGCTGCACTTTTTGACGAAGCATTTCAGCACAGAGAGCGTACCAGATGAGG 370
Query 1 --------------------ATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGACGATCCCCAGTATCCTTTGAC 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGGACGGCAGTCCCCAGCCATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGACGATCCCCAGTATCCTTTGAC 444
Query 55 AGTGAAATAATAATGATGAATCATGTTTACAAAGAAAGATTCCCAAAGGCCACCGCACAAATGGAAGAGCGACT 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGTGAAATAATAATGATGAATCATGTTTACAAAGAAAGATTCCCAAAGGCCACCGCACAAATGGAAGAGCGACT 518
Query 129 AGCAGAGTTTATTTCCTCCAACACTCCAGACAGCGTGCTGCCCTTGGCAGATGGAGCCCTGAGCTTTATTCATC 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGCAGAGTTTATTTCCTCCAACACTCCAGACAGCGTGCTGCCCTTGGCAGATGGAGCCCTGAGCTTTATTCATC 592
Query 203 ATCAGGTGATTGAGATGGCCCGAGACTGCCTGGATAAATCTCGGAGTGGCCTCATTACATCACAATACTTCTAC 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATCAGGTGATTGAGATGGCCCGAGACTGCCTGGATAAATCTCGGAGTGGCCTCATTACATCACAATACTTCTAC 666
Query 277 GAACTTCAAGATAATTTGGAGAAACTTTTACAAGATGCTCATGAGCGCTCAGAGAGCTCAGAAGTGGCTTTTGT 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAACTTCAAGATAATTTGGAGAAACTTTTACAAGATGCTCATGAGCGCTCAGAGAGCTCAGAAGTGGCTTTTGT 740
Query 351 GATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCCGCCCAGCACGTCTCCTGGAATGCCTGGAGTTTGACC 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCCGCCCAGCACGTCTCCTGGAATGCCTGGAGTTTGACC 814
Query 425 CTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGACATT 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGACATT 888
Query 499 CCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGATCCCCTAGAAGAAATGGCCCAGTTGAGCAGCTGTGA 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGATCCCCTAGAAGAAATGGCCCAGTTGAGCAGCTGTGA 962
Query 573 CAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGGGCCATGGGGCATCTCTGCCATCTAAAAAGACACCCT 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGGGCCATGGGGCATCTCTGCCATCTAAAAAGACACCCT 1036
Query 647 CTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAATGGCG-CTATGGGGCTGTATTTCTGGTGCGGCACAAG 719
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1037 CTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAATGGCGCCTATGGGGCTGTATTTCTGGTGCGGCACAAG 1110
Query 720 TCCACCCGGCAGCGC-TTGCCATGA--GAGATC-ACAAGCAG-ACTTGAT-CTACGGA--CAGAT-CAGCAGGC 784
||||||||||||||| ||||||||| .||||| |||||||| ||.|||| ||||||| ||||| ||||||||
Sbjct 1111 TCCACCCGGCAGCGCTTTGCCATGAAGAAGATCAACAAGCAGAACCTGATCCTACGGAACCAGATCCAGCAGGC 1184
Query 785 TTTCGT-GAGCGTGACATACTGAC-TTCGCTGAGAACCCCTTGGTGGTCAGCATGTTCTGCTCCTTTGATACCA 856
.||||| ||||||||||||||||| |||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 1185 CTTCGTGGAGCGTGACATACTGACTTTCGCTGAGAACCCCTTTGTGGTCAGCATGTTCTGCTCCTTTGATACCA 1258
Query 857 AGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGGGGAGACTGTGCCACTCTGCTGAAGAATATTGGGGCC 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGGGGAGACTGTGCCACTCTGCTGAAGAATATTGGGGCC 1332
Query 931 CTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAACTGTGCTGGCCCTGGAGTACTTACACAACTATGGCAT 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAACTGTGCTGGCCCTGGAGTACTTACACAACTATGGCAT 1406
Query 1005 CGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTACATCCATGGGGCACATCAAGCTCACGGACTTTGGAC 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTACATCCATGGGGCACATCAAGCTCACGGACTTTGGAC 1480
Query 1079 TGTCCAAAATGGGCCTCATGAGTCTGACAACGAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGAATTC 1152
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TGTCCAAAATTGGCCTCATGAGTCTGACAACGAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGAATTC 1554
Query 1153 CTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGCGCCTGAGGTGATCCTGCGCCAGGGCTATGGGAAGCC 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGCGCCTGAGGTGATCCTGCGCCAGGGCTATGGGAAGCC 1628
Query 1227 AGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGTTCCTGGTGGGCTGCGTCCCTTTTTTTGGAGATACTC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGTTCCTGGTGGGCTGCGTCCCTTTTTTTGGAGATACTC 1702
Query 1301 CGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATTGTGTGGCCTGAGGGTGATGAGGCACTGCCCCCAGAC 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATTGTGTGGCCTGAGGGTGATGAGGCACTGCCCCCAGAC 1776
Query 1375 GCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCCTCTGGAGAGACTTGGCACAGGCAGTGCCTATGAGGT 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCCTCTGGAGAGACTTGGCACAGGCAGTGCCTATGAGGT 1850
Query 1449 GAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAGGACTTCTCCGCCAGAAGGCTGAATTTATTCCTCAGT 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAGGACTTCTCCGCCAGAAGGCTGAATTTATTCCTCAGT 1924
Query 1523 TGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGCTCAGAGCGATACCACCACATGGACTCGGAGGATGAG 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGCTCAGAGCGATACCACCACATGGACTCGGAGGATGAG 1998
Query 1597 GAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCAGTTCTCTTCCTGCTCTCCAAGGTTCAACAAGGTGTA 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCAGTTCTCTTCCTGCTCTCCAAGGTTCAACAAGGTGTA 2072
Query 1671 CAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCCGGACACCACCCCCGACCAAGCGCAGCCTGAGTGAGG 1744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCCGGACACCACCCCCGACCAAGCGCAGCCTGAGTGAGG 2146
Query 1745 AGAAGGAGGACCATTCGGATGGCCTGGCAGGGCTCAAAGGCCGAGA-CGGAGGCTGGGTGATTGGCTCCCCTGA 1817
||||||||||||||||.||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 2147 AGAAGGAGGACCATTCAGATGGCCTGGCAGGGCTCAAAGGCCGAGACCGGA-GCTGGGTGATTGGCTCCCCTGA 2219
Query 1818 GATTATTACGGAAGCGGCTGTCGGTGTCTGAGTCGTCCCANCACAGAGAGTGACTCAAGCCCTCCAATGAACA- 1890
|| |||||||||||||||||||||||||||||||.||||| |||||||||||||||||||||||||||| |||
Sbjct 2220 GA-TATTACGGAAGCGGCTGTCGGTGTCTGAGTCATCCCA-CACAGAGAGTGACTCAAGCCCTCCAATG-ACAG 2290
Query 1891 TGCGACGCCGCTGCTCAGGCTTCCTGGATGCGCCTCGGTTCCCGGAGGGCCNTGAGGAGCCCAGCAGCACCCNT 1964
||||||||||||||||||||.||||||||||||||||||||||||||||||.|||||||.|||||||||||| |
Sbjct 2291 TGCGACGCCGCTGCTCAGGCCTCCTGGATGCGCCTCGGTTCCCGGAGGGCCCTGAGGAGGCCAGCAGCACCC-T 2363
Query 1965 CAGGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCCCATTCT-GAGAGGGGGTATCTGGGCCTGTCAC 2037
|||||||||||||||||||||||||||||||||||||||||| .||| |||||||||||||||||||||||||
Sbjct 2364 CAGGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCC--ATCTGGAGAGGGGGTATCTGGGCCTGTCAC 2435
Query 2038 TGAACACTCNAGGGGAGCAGCGGCCAAAGCTGGATGAGGAAGCTGTTGGCCGGAGCAGTGGTTCCAGTCCAGCT 2111
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2436 TGAACACTC-AGGGGAGCAGCGGCCAAAGCTGGATGAGGAAGCTGTTGGCCGGAGCAGTGGTTCCAGTCCAGCT 2508
Query 2112 ATGGAGACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCAAGGCCATCAGTGACCTGGCTGT 2185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2509 ATGGAGACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCAAGGCCATCAGTGACCTGGCTGT 2582
Query 2186 GCGTAGGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACTGCTCGCCCTGTCAACAAAGTGA 2259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2583 GCGTAGGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACTGCTCGCCCTGTCAACAAAGTGA 2656
Query 2260 TCAAGTCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGAACACCACACCTGCTCCCCGTTGGCCAGC 2333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2657 TCAAGTCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGAACACCACACCTGCTCCCCGTTGGCCAGC 2730
Query 2334 CCCATGTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACTCTTCTC---------------------- 2385
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2731 CCCATGTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACTCTTCTCCAAGCAGGGACTTCTTGCCAGC 2804
Query 2386 ------------------------------------------CAAGAAGTATGGCTTCACCCTGCGGGCCATTC 2417
||||||||||||||||||||||||||||||||
Sbjct 2805 CCTTGGCAGCATGAGGCCTCCCATCATCATCCACCGAGCTGGCAAGAAGTATGGCTTCACCCTGCGGGCCATTC 2878
Query 2418 GCGTCTACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGTGTGGCACGTGGAGGATGGAGGTCCGGCC 2491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2879 GCGTCTACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGTGTGGCACGTGGAGGATGGAGGTCCGGCC 2952
Query 2492 AGTGAGGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATGGGGAACCTGTGCATGGCCTGGTGCACAC 2565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2953 AGTGAGGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATGGGGAACCTGTGCATGGCCTGGTGCACAC 3026
Query 2566 GGAGGTGGTGGAGC------------------------------------------------------------ 2579
|||||||||.||||
Sbjct 3027 GGAGGTGGTAGAGCTGATCCTGAAGAGTGGAAACAAGGTGGCCATTTCAACAACTCCCCTGGAGAACACATCCA 3100
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3101 TTAAAGTGGGGCCAGCTCGGAAGGGCAGCTACAAGGCCAAGATGGCCCGAAGGAGCAAGAGGAGCCGCGGCAAG 3174
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3175 GATGGGCAAGAAAGCAGAAAAAGGAGCTCCCTGTTCCGCAAGATCACCAAGCAAGCATCCCTGCTCCACACCAG 3248
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3249 CCGCAGCCTTTCTTCCCTTAACCGCTCCTTGTCATCAGGGGAGAGTGGGCCAGGCTCTCCCACACACAGCCACA 3322
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3323 GCCTTTCCCCCCGATCTCCCACTCAAGGCTACCGGGTGACCCCCGATGCTGTGCATTCAGTGGGAGGGAATTCA 3396
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3397 TCACAGAGCAGCTCCCCCAGCTCCAGCGTGCCCAGTTCCCCAGCCGGCTCTGGGCACACACGGCCCAGCTCCCT 3470
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3471 CCACGGTCTGGCACCCAAGCTCCAACGCCAGTACCGCTCTCCACGGCGCAAGTCAGCAGGCAGCATCCCACTGT 3544
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3545 CACCACTGGCCCACACCCCTTCTCCCCCACCCCCAACAGCTTCACCTCAGCGGTCCCCATCGCCCCTGTCTGGC 3618
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3619 CATGTAGCCCAGGCCTTTCCCACAAAGCTTCACTTGTCACCTCCCCTGGGCAGGCAACTCTCACGGCCCAAGAG 3692
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3693 TGCGGAGCCACCCCGTTCACCACTACTCAAGAGGGTGCAGTCGGCTGAGAAACTGGCAGCAGCACTTGCCGCCT 3766
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3767 CTGAGAAGAAGCTAGCCACTTCTCGCAAGCACAGCCTTGACCTGCCCCACTCTGAACTAAAGAAGGAACTGCCG 3840
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3841 CCCAGGGAAGTGAGCCCTCTGGAGGTAGTTGGAGCCAGGAGTGTGCTGTCTGGCAAGGGGGCCCTGCCAGGGAA 3914
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3915 GGGGGTGCTGCAGCCTGCTCCCTCACGGGCCCTAGGCACCCTCCGGCAGGACCGAGCCGAACGACGGGAGTCGC 3988
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 3989 TGCAGAAGCAAGAAGCCATTCGTGAGGTGGACTCCTCAGAGGACGACACCGAGGAAGGGCCTGAGAACAGCCAG 4062
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4063 GGTGCACAGGAGCTGAGCTTGGCACCTCACCCAGAAGTGAGCCAGAGTGTGGCCCCTAAAGGAGCAGGAGAGAG 4136
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4137 TGGGGAAGAGGATCCTTTCCCGTCCAGAGACCCTAGGAGCCTGGGCCCAATGGTCCCAAGCCTATTGACAGGGA 4210
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4211 TCACACTGGGGCCTCCCAGAATGGAAAGTCCCAGTGGTCCCCACAGGAGGCTCGGGAGCCCACAAGCCATTGAG 4284
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4285 GAGGCTGCCAGCTCCTCCTCAGCAGGCCCCAACCTAGGTCAGTCTGGAGCCACAGACCCCATCCCTCCTGAAGG 4358
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4359 TTGCTGGAAGGCCCAGCACCTCCACACCCAGGCACTAACAGCACTTTCTCCCAGCACTTCGGGACTCACCCCCA 4432
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4433 CCAGCAGTTGCTCTCCTCCCAGCTCCACCTCTGGGAAGCTGAGCATGTGGTCCTGGAAATCCCTTATTGAGGGC 4506
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4507 CCAGACAGGGCATCCCCAAGCAGAAAGGCAACCATGGCAGGTGGGCTAGCCAACCTCCAGGATTTGGAAAACAC 4580
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4581 AACTCCAGCCCAGCCTAAGAACCTGTCTCCCAGGGAGCAGGGGAAGACACAGCCACCTAGTGCCCCCAGACTGG 4654
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4655 CCCATCCATCTTATGAGGATCCCAGCCAGGGCTGGCTATGGGAGTCTGAGTGTGCACAAGCAGTGAAAGAGGAT 4728
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4729 CCAGCCCTGAGCATCACCCAAGTGCCTGATGCCTCAGGTGACAGAAGGCAGGACGTTCCATGCCGAGGCTGCCC 4802
Query 2580 -------------------------------------------------------------------------- 2579
Sbjct 4803 CCTCACCCAGAAGTCTGAGCCCAGCCTCAGGAGGGGCCAAGAACCAGGGGGCCATCAAAAGCATCGGGATTTGG 4876
Query 2580 -------------------------------- 2579
Sbjct 4877 CATTGGTTCCAGATGAGCTTTTAAAGCAAACA 4908
