Nucleotide Global Alignment
Description
- Query:
- TRCN0000467626
- Subject:
- XM_006538511.2
- Aligned Length:
- 2358
- Identities:
- 690
- Gaps:
- 1583
Alignment
Query 1 ATGGGTGATGAAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAAT-------TCTGATGACCGGGATTCCAAGCGGGATTCCC 141
|| |||||||||||.||||||||..|||||||||
Sbjct 1 ----------------------------------ATGTCACAGTCTGATGACCGCGATTCCAAAAGGGATTCCC 40
Query 142 TTGAGGAGGGGGAGCTGAGAGATCACCGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCT 215
||||||||||||||||||||||||||||.||||||||||||||.||||||||.||.|||||||||||.||.|||
Sbjct 41 TTGAGGAGGGGGAGCTGAGAGATCACCGAATGGAGATCACAATCAGGAACTCACCATATAGAAGAGAGGATTCT 114
Query 216 ATGGAAGACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGC 289
|||||||||||||||||.||.|||||||||.||||||||||||||||||||||||||||||||||||||||.||
Sbjct 115 ATGGAAGACAGAGGAGAGGAGGATGATTCTCTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAGGC 188
Query 290 TCATCACAGAAAAGATGAAAAGAGAAAAGAGAAACGTAGGCATCGTAGCCATTCAGCAGAAGGGGGGAAGCATG 363
|||||||||||||||.||.||.|||||||||||||||.|.||||||||||||||||||||.||.|||||.||||
Sbjct 189 TCATCACAGAAAAGACGAGAAAAGAAAAGAGAAACGTCGACATCGTAGCCATTCAGCAGAGGGAGGGAAACATG 262
Query 364 CTAGAGTGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAACGGCATCGAGAAGAACAGGATAAAGCTCGCCGG 437
|.|||||||||||.||||||||.|||||||||||.||||||||.||.|||||||||||.|||||||||||..||
Sbjct 263 CCAGAGTGAAAGAGAAAGAAAGGGAGCACGAACGCCGGAAACGCCACCGAGAAGAACAAGATAAAGCTCGAAGG 336
Query 438 GAATGGGAAAGACAGAAGAGAAGGGAGATGGCAAGGGAGCATTCCAGGAGAGAAAGGGACCGCTTGGAGCA--- 508
||.|||||||||||||||||.|||||.|||||.||.||.||||||||.|||||.|||||||||.|||||||
Sbjct 337 GAGTGGGAAAGACAGAAGAGGAGGGAAATGGCGAGAGAACATTCCAGAAGAGAGAGGGACCGCCTGGAGCAGTT 410
Query 509 -------------------------------------------------------------------------- 508
Sbjct 411 AGAAAGGAAGAGGGAGCGGGAGCGCAAGCTGAGGGAGCAGCAGAAGGAGCAGCGGGAGCAGAAGGAGCGGGAAC 484
Query 509 -------------------------------------------------------------------------- 508
Sbjct 485 GGAGGGCAGAGGAGCGCCGCAAAGAGAGAGAAGCGCGTAGGGAAGTCTCTGCACATCACCGTACCATGAGGGAG 558
Query 509 -------------------------------------------------------------------------- 508
Sbjct 559 GAGTACAGTGATAAGGGGAAGGTTGGCCACTGGAGCCGCAGCCCTCTGAGGCCACCAAGAGAGCGCTTTGAGAT 632
Query 509 -------------------------------------------------------------------------- 508
Sbjct 633 GGGAGACAACCGGAAGCCAGTAAAAGAAGAGAAGGTGGAAGAGAGAGACTTGTTGTCAGACCTCCAAGACATCA 706
Query 509 -------------------------------------------------------------------------- 508
Sbjct 707 GTGACAGCGAGAGGAAAACCAGCTCAGCTGAGTCTTCATCAGCAGAATCAGGCTCAGGTTCTGAAGAGGAGGAG 780
Query 509 -------------------------------------------------------------------------- 508
Sbjct 781 GAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGGGAGCACCAGTGAAGAATCAGAGGAAGAAGAGGAAGAAGAAGA 854
Query 509 -------------------------------------------------------------------------- 508
Sbjct 855 GGAGGAGGAAGAAGAGGAGACTGGGAGCAACTCTGAGGAGGCCTCTGAACAGTCCGCAGAAGAAGTCAGTGATG 928
Query 509 -------------------------------------------------------------------------- 508
Sbjct 929 AGGAAATGAGTGAAGATGAAGACAGAGAAAACGAGAACCACATCTTGGTTGTTCCAGAGTCACGATTTGACCGA 1002
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1003 GATTCTGGGGACAGTGAAGAAGGGGAGGAAGAAGTTGGTGAAGGGACTCCACAGAGCAGTGCCCCCACCGAAGG 1076
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1077 AGACTATGTTCCTGACTCTCCAGCACTGTCACCTATTGAGCTAAAACAAGAACTGCCCAAATACCTGCCAGCCC 1150
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1151 TGCAGGGATGCAGGAGTGTAGAGGAGTTTCAGTGTCTGAACAGGATTGAAGAAGGCACCTATGGGGTGGTCTAC 1224
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1225 AGAGCAAAGGACAAGAAAACAGATGAAATTGTGGCTCTGAAGCGGTTAAAGATGGAGAAGGAGAAGGAAGGCTT 1298
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1299 CCCAATCACGTCGCTGAGGGAAATCAACACCATCCTCAAGGCCCAGCACCCCAACATCGTCACCGTCAGGGAAA 1372
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1373 TTGTTGTGGGAAGTAACATGGACAAGATCTACATTGTGATGAACTACGTGGAACATGACCTCAAGAGCCTAATG 1446
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1447 GAGACCATGAAGCAGCCCTTCCTGCCAGGGGAGGTGAAGACCCTGATGATTCAGCTGCTGAGTGGGGTAAAGCA 1520
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1521 CCTCCATGACAATTGGATCCTACACCGTGACCTGAAGACCTCTAACCTCCTGCTGAGCCATGCTGGCATTCTCA 1594
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1595 AGGTGGGCGACTTTGGGCTGGCTCGGGAGTATGGTTCACCCCTAAAGGCCTACACTCCAGTTGTTGTAACCCTG 1668
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1669 TGGTATCGTGCCCCAGAACTACTGCTTGGTGCTAAGGAATACTCCACAGCTGTGGACATGTGGTCGGTAGGCTG 1742
Query 509 -------------------------------------------------------------------------- 508
Sbjct 1743 CATATTTGGAGAACTGCTGACACAGAAACCTCTGTTCCCTGGGAAGTCAGATATTGATCAGATTAACAAGATTT 1816
Query 509 -----------------------------------------------------------GTCAAGAAGATGACC 523
|||||||||||||||
Sbjct 1817 TCAAGGACCTGGGTACTCCTAGTGAGAAAATCTGGCCTGGCTATAATGACCTCCCAGCCGTCAAGAAGATGACC 1890
Query 524 TTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCAGGGCTTCGACCTCAT 597
|||||||||.|.|||||.|||||||||||||||.|.||.||||||.||.|.|||||.||.|||||.||.|||||
Sbjct 1891 TTCAGCGAGTATCCCTATAACAACCTCCGCAAGAGATTTGGGGCTTTGTTATCAGATCAAGGCTTTGATCTCAT 1964
Query 598 GAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGCATGAGTATTTCCGCG 671
|||||||||||||||.||||.|||.||.||||||||||.|||.||.||.|||||||||||.||.||||||||.|
Sbjct 1965 GAACAAGTTCCTGACATACTACCCTGGCAGGAGGATCAACGCAGAAGATGGCCTCAAGCACGAATATTTCCGAG 2038
Query 672 AGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGCCCGCCAAGAGCGAGCAGCAGCGTGTGAAGCGG 745
||||.|||||||||||||||||.||||||||||||||||||||.||||||||.|||||||||.|.||||||||.
Sbjct 2039 AGACTCCCCTCCCCATCGACCCATCCATGTTCCCCACGTGGCCTGCCAAGAGTGAGCAGCAGAGAGTGAAGCGA 2112
Query 746 GGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACGACCTGAAGGAGACGGG 819
|||||.||.||..||||.||||||||.||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct 2113 GGCACGAGTCCACGGCCTCCTGAGGGCGGCCTGGGCTACAGCCAGCTGGGTGATGATGACCTGAAGGAGACGGG 2186
Query 820 CTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTCAAGTTC 883
|||||||||.||||||||.||||||||.|||||.||.||.|||||.||||||||||||||||||
Sbjct 2187 CTTCCACCTCACCACCACCAACCAGGGAGCCTCAGCTGCAGGCCCTGGCTTCAGCCTCAAGTTC 2250
