Nucleotide Global Alignment
Description
- Query:
- TRCN0000467672
- Subject:
- XR_871174.1
- Aligned Length:
- 2855
- Identities:
- 211
- Gaps:
- 2619
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AACTCAGACGTAGAGCCTCTCCCTATATATTCCTCGTGTACTGAGGTCGCCCAGCTCCACCAGGGCCCGCTATC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACAGGAACCTTTCACAACAGCCATTACTCGCAGGGCAACAAAGAATCAAATGAGAGCAAGACAAGCGGAGACC 148
Query 1 -------------------------------------------ATGAGTCAGAAACCGGCCAAGGAGGGTCCCA 31
||||||||||||..||||||||||||.||||
Sbjct 149 AGAGTTCTGGTTGCCAGACCGGCACGGATGAAAACCCAGTGAGATGAGTCAGAAAATGGCCAAGGAGGGCCCCA 222
Query 32 GACTCTCCAAAAACCAGAAGTACTCCGAACACTTCAGCATACACTGCTGCCCGCCGTTCACCTTCCTCAATTCC 105
|.||||||||.||||||||||.||||||.|||||||||||.|||||||||||.||.||||||||||||||.|||
Sbjct 223 GGCTCTCCAAGAACCAGAAGTTCTCCGAGCACTTCAGCATCCACTGCTGCCCACCCTTCACCTTCCTCAACTCC 296
Query 106 AAGAAGGAGATAGTGGATCGGAAATACAGCATCTGTAAGAGCGGCTGCTTCTACCAGAAGAAAGAGGAGGACTG 179
|||...|||||.|||||.||.||.|||||||||||.||||||||.|||||.|||||||||||.|||||||||||
Sbjct 297 AAGCGTGAGATCGTGGACCGCAAGTACAGCATCTGCAAGAGCGGTTGCTTTTACCAGAAGAAGGAGGAGGACTG 370
Query 180 GATCTGCTGCGCCTGCCAGAAGAC----------------------CAGATTGAAAAGG---AAG-ATCAG--- 224
|||||||||.|||||||||||||| ||| ||| ||| |.|||
Sbjct 371 GATCTGCTGTGCCTGCCAGAAGACTAGCCGCCGTGCCACGTCCCCTCAG-------AGGCCCAAGCACCAGCCA 437
Query 225 -----------------------------GCCAACC---CCAAAG------------------AAG--AAG--- 243
||||.|| |||||| ||| |||
Sbjct 438 GCTGCGTCCCCAGTGGTGGTCAGAGCGCCGCCAGCCAAGCCAAAGTCCCCTCTGATGCCAGCCAAGCCAAGGTC 511
Query 244 -------------------------------------------------------------------------- 243
Sbjct 512 CCCACCGAGGCCAGCCAAGCCAAGGTCCCCTTCAAGGACTGAGCGCCAGCCGCGTCCCCGCCCAGAGGTCCGAC 585
Query 244 -------------------------------------------------------------------------- 243
Sbjct 586 CACCACCAGCCAAGCAGAAGCCCCCTCAGAAGTCTAAGCAGCCAGCACGCAGCAGCCCCCTCAGAGGGCCAGGC 659
Query 244 -------------------------------------------------------------------------- 243
Sbjct 660 ACCAGCCGCGGGGGGTCTCCCACCAGAGCTCCTAGGTTCTGGTAACACCATCTCTTGCCTTTTGTCCCCTCTAG 733
Query 244 -------------------------------------------------------------------------- 243
Sbjct 734 CCTAAGATTGAGGAGGAGGAGCAGGTCAACCCCAAGGAAGAAGTGACCGAGAAGGGACTTCTTGTGAATGGACA 807
Query 244 -------------------------------------------------------------------------- 243
Sbjct 808 GCCTCTGCCTGTGGACTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCTCAAGTATGATG 881
Query 244 -------------------------------------------------------------------------- 243
Sbjct 882 CAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCCTCAGTCCCCATGGTGTGGGAGCCTTAGGGCAGCC 955
Query 244 -------------------------------------------------------------------------- 243
Sbjct 956 TTCCTGGAGCATGTGGACGATGCCATTCCATCACCTCCCTCTATAACTGCCAGCGAGATATCTCTGTCAACTGT 1029
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1030 CTCGACTCTCCGAGGATTCGGGTTCTTCAGGCTGAAGATTCTTGTGTCTTCTCGGATGTGCAAAACAAGGTCAT 1103
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1104 GGTGCACAACCATGCAAACCGCAAATGCAAAAGAGAAATTGTCAAGGTTGGCGGTGACGTGAGAAAAATCCTAG 1177
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1178 CAGCTACCGATGGGAGTCTATACATTGTCACCACTGAGCTGTACTCTGGGGACACTGTCAAGGCAAAATATCTT 1251
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1252 AAAACCTCTAATCAAGTGACTGCAATTTTAGGAATCCATCCTGGAGAAAACTCACACCCCTTTAGAGAAGGAGA 1325
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1326 AATGCGCAGATTTGTCTAAAAGATCGTGGTTTGTAGTTAAGAGAAGTGGAATGAAACTAGCCAAAATGTCTGTC 1399
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1400 CAAGGGAATGAGAGAATCAATTTTGGGACGTTCACAAATAAAGTCCTAACAGCGGTTAAAAGCCAATCTGTCAG 1473
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1474 ATAGACCATGTCATGTAGGTAAATCTAGAAAGCAAACTGAGAACTATAAAAATCAAGTACCGGGCAGTAAATGC 1547
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1548 AGTATGACGTTCTGGGCCTGAATATTGACATCCCACAGTCCTGTATTGGTTATTGCTTAATAAGGAGAAGCCAC 1621
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1622 AAGATCTCACACTTTTTCTATAATGCAATAGGATTTAAAAATGACAGCAGAACACAAAGACACTAGAAATTGTC 1695
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1696 CTGTCAGAAATAAAAGTATAAGAAATAATTCCTGGCTTGAGGAAATAACCCAGACTAAAAGCTACATAGAAACG 1769
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1770 GCTTAACAGTACTGGCAGGGCATATATTTGTTTGGAGAGGGTCGATGTGAAGTCTGTGAATAGTCTGGGATGTT 1843
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1844 TACAAGGTCGCATAAATTTTAAACACCAAAAATATTTGTTTTGAATCAATTTTGGGTCTGGGCTATAGAGTCTG 1917
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1918 CCTTGTGATGGTTCCTGACACGAGAGAAAAGGGAAGAAATGTAAATACAGCTCTCGAATTTTCCTTTAAAGACC 1991
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1992 AGGTAGGTAGGAAAGGACAACAGGATGTTGGGGAATGTGGAGGGATGTAAAACAGACAGTATTACGGTGGCGAA 2065
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2066 AACTCAGTGTAGGGCGATAAGAACATCAGATGGCCTTGTGCTGGGAGCCGGGGTGGCCAAGCACAGGCGGATGC 2139
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2140 TTGAAGACCCCAAAGGTCACCATGGCGTCCTCACAGCCAGACCCGGCAAAGTTCAGATCAAGTGCACGGATGGG 2213
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2214 GGCCATGTTAGTGGAAACTGTCCAAGGTGTGCGGAGGGGGTGAGGAAGACAGCCAGGAGGAAGAGATGGCTCAG 2287
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2288 AATGCTGCACTACAGCAAAGAAGAAGCAGGCCAAATATCGTCCTAAGGCAGCCGAGGGGTCCCGGCTTCCTCTC 2361
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2362 CCGAGGGCACTGTGGCTCCGTGGAAGTGCCGAGGCAGAGGCAGGGGAATTTAACTGCACAAAAACTACACGCAG 2435
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2436 AAACTCAGGTGCTAAAATGGACATGTATGTGACCACCTTTCTGAGGACCAGGTTCCAGTGAGTGCCCAGGGATG 2509
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2510 TTTCCTTCTCGACTACGGTAACTGAGCTGAGAAGAATGGGAACGGGTTAGGAGCACACAGTAGCCCATTGGTGA 2583
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2584 GACAAATTTCCAGGCTAGCTTCATCCAATCCATTAAGGAGACTTTATGCTTTTTCATCTTGTTTTCATTTTGGC 2657
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2658 AAAGCAAAGCCTATCCTGAGTGCTCGTTTGTCTCCGCCCTCCACGCCACCCCTGAGACACCGAGCATGCGCATT 2731
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2732 AACCCAGAGCGCGCTAACCCATGCGCAGCGTTGGACGTTAGCTCATTAATGTGATTAACCAGAAACCACTAAAT 2805
Query 244 ------------------------------------------- 243
Sbjct 2806 TTTGTTTGTTGTAGAAATAAAACCTGGGGATGGATCAAACCTA 2848
