Nucleotide Global Alignment
Description
- Query:
- TRCN0000467678
- Subject:
- XR_001737038.1
- Aligned Length:
- 6134
- Identities:
- 170
- Gaps:
- 5936
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGTGAGGTGACTCTGGCCGCTTACTTCCGGTTCCTAGCGATGCGCATCCGGGTCACGCTAACGCCGCGGTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTCCGCTCGATTGGTTCTACTGTGGGTCTGGACTGATCTCCATGTCCTGTTGTGGGGCTTTTACAGCCTTTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTGTGAAAACTGCTGAGAGAGACTTGCAATCCAGTCACATAAGTATAATAAAGAAATATTGGTCCTCATGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAGAGCAAGATTTACCAGAGCAACCAAGAAAGGTGAAAAAAGCCAAGATGCAGGAATCAGGAGAGCAAACTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGTCAAGTAAGCAATCCAGATGTCAGTGATCAGAAGCCTGAAACATCAAGCCTTGCTTCAAACCTTCCCATGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGAGGAAATTATGACATGCACCGATTACATCCCTCGCTCATCCAATGATTATACCTCACAAATGTATTCTGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACCTTATGCACATATTCTCTCAGTTCCTGTTTCGGAAACTGCTTACCCTGGACAGACTCAATACCAGACACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAGCAGACTCAACCCTATGCTGTCTACCCTCAGGCAACCCAAACGTATGGACTACCTCCTTTTGGTGCATTGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCCAGGTATGAAACCTGAAAGTGGTTTAATTCAGACTCCATCTCCAAGTCAACACAGTGTTCTTACCTGCACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAGGGTTAACCACAAGCCAGCCAAGCCCAGCACATTATTCTTATCCCATTCAAGCTTCAAGCACAAATGCCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTGATATCTACTTCTTCTACAATTGCCAATATTCCAGCAGCAGCAGTAGCCAGCATCTCAAACCAGGATTATC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCACCTATACTATTCTTGGTCAGAATCAGTACCAGGCCTGCTACCCCAGCTCCAGCTTTGGAGTCACAGGTCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTAACAGTGATGCAGAGAGCACCACATTAGCAGCAACCACATACCAGTCGGAGAAGCCTAGTGTCATGGCGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCACCTGCAGCACAGAGACTTTCCTCTGGAGACCCTTCTACAAGTCCATCTTTGTCCCAGACTACACCAAGTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGATACTGATGATCAGTCCAGGAAAAACATGACTAGCAAGAACCGGGGCAAGAGGAAAGCTGATGCCACTTCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCCCAAGACAGTGAATTAGAACGGGTATTTCTGTGGGACTTGGATGAAACCATCATCATCTTCCACTCACTTCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TACTGGATCCTATGCCCAGAAATATGGAAAGGACCCAACAGTAGTGATTGGCTCAGGTTTAACAATGGAAGAAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGATTTTTGAAGTGGCTGATACTCATCTATTTTTCAATGACTTAGAGACATAGTCCTCACTCAGGAACTGAAAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCTGTGAAGAATTTGACCTGAATGTGTTCCTGCCCCCCAGGAGTGTGACCAGGTACATGTGGAAGATGTGGCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCTGATGACAATGGCCAAGACTTGAGCAACTACAGTTTCTCAACAGATGGTTTCAGTGGCTCAGGAGGTAGTGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGCCATGGTTCATCTGTGGGTGTTCAGGGAGGTGTGGACTGGATGAGGAAACTAGCTTTCCGCTACCGGAAAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGAGAGAAATCTATGATAAGCATAAAAGCAACGTGGGTGGTCTCCTCAGTCCCCAGAGGAAGGAAGCACTGCAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGATTAAGAGCAGAAATTGAAGTTTTAACAGATTCCTGGTTAGGAACTGCATTAAAGTCCTTACTTCTCATCCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTCCAGAAAGAATTGTGTGAATGTTCTGATCACTACCACCCAGCTGGTTCCAGCCCTGGCCAAGGTTCTCCTAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATGGACTAGGAGAAATATTTCCTATTGAGAACATCTATAGTGCTACCAAAATTGGTAAGGAGAGCTGCTTTGAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGAATTGTGTCAAGGTTTGGAAAGAAAGTCACATATGTAGTGATTGGAGATGGACGAGATGAAGAAATTGCAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAAACAGCACAACATGCCTTTCTGGAGGATCACAAACCATGGAGACCTAGTATCCCTTCACCAGGCTTTAGAGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTGATTTTCTCTAAGAACTGGAATGAGGAGCCTTCCCCTTGAGCTCCTTTTCACTCCTGAAGGGAGCTGGAGAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGGAACCAACTGAGAACTTTCTCTGTCTGTCTCTCTCTGTGTCTCTGTCTCTATCTCTCTCTCTTTCTCTCTTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCTCTCTCCCTCTCTCCCTCCCTCCCTTCCTCTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTTTATCCATGGAATGCTGGCGAGAACACAATCAGAACCAACAGCTGCAATTTTTGCTAAGAGTGAGCTGCAGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTAATTTTTCTGTGTTTTGTTTTTGTTTTTTTGTTTTCAAAAAATGAAAAAGAAAAGGAAATTCCTGGGGCAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGTTGCACTCTTAGTCCATGACCAGATTGAGAATTACTGATAACTTGTGGTGATCAGATAAATGCAGCAGACTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTATGATAACATCTCTTGCAGTCTTAGAGTCTCCTTAGCTTAGAATCTCACTTATTTCCAGCGAATGTGTATGT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCCCCACTTTCTTTTTCTAGCAAGAAGGGGTGTTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAAGTCTTGAAAATAGTAATTGAAATATCTAAAATACCTCCCTGTGGCAGTAGCACCTCTATAGCTGCTCCAGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGTCTGCTCTCTAGGATGATACCTTTCCTGTTCTTCTATCTCCTAGCTGGTGAACTGTGGGGCACTGGACACTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGTAACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTTTCCCTTTAGTCAAAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGCACAACCCTAAAAACTCCTTCAGCTTGACTGTCATTCAGACTGTATCACAGGAGGCTTAGCTTCCAAACTGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGAGAAGGAACTAAAGTGTCTTATGAATTTCAGCTTCTTGGCTCTTGAGACCGAAAGGTTCTACCTATTCCCCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TGCAGAGAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTCATCATAATGCTAGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTCTTACCCCTTTCCTGCCCTCTGCACCTCATGTCCACCTCCAGGCAGCTCTGGCCAGTCCCCGGGTATTAGAC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CCAAGAATTCAAATCAAATCTAAAAACATGCTTATAACTACATTTTGGCCAAAACTGCCAATGTATTTGACTTC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTTTGTGGAAGCCCTAAGCCATATGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AGCAGATTGCTGTATTTAAATTTTCCCATGGAAAACCCTGCTTCTCAAATCCCATTCTAAAGTAGGAAACCAGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AAGACTTTGCTGATTGTGGGGGGAAGGGAGAAACAGACAGGTTTTCACATTGTTGCCAAGGCTGGTCTTGAACA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCTGGCCTCAAGCGATCCTCCCACCTCGGCCTCTCAAAGTGTTGGGATTGTAGGCATGAGCCACTGCACCCAGC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CAGACTTTCCTGATTTAAATGAGAGTACTGCATCATTCCCTACTTCATGGCCCAAAACTTAATCCTGGGCCAAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGCAGGAGCATCTCTCGACCTCTGGGCAGATTGGTGGGTGCCCAGGCACTAGTCACAGCCTTCCAGCCCAGCCA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGATTGTTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCATCTACTCAGGCAGGATAAAATTCCCTAGAGCTG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGGAAGTTCAGCCTCTCCCAGGCTACACAGAGAGAGATGATACAAGCACCTCAGATTGAGATGCAGGATTGGTC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CGCAGAAGGAGGCATTGTTGACCAACCCCAGCTATAATTGCTTGTCACCAGAGATTCTGCATACCCATTTCCAG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGAGAGAGAGGCTGGTA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TACACATTCCTTCAGAACTCATTGAAAAGCGCTCATAACTCGTGATTTTAAGGAGTAAGTTTTTGCTGAGTAGC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TGAAGTCAGTGCTCCTTTACTTAGCTGCCTCTTTGGCCTTGTTTCCTGTGGGGTTGGGAGGAGGGAGATGTAGT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GTGAGGTAGGCCTTCCCTTGGTCTGTATTCAGCATAGTTGCCTAGATGCTGCTCTGCCTTGTTTGATGGTTGAT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CTTAGGAAGCTCTAGGTTTTACTCTGAGGCCTCAAACCCTCCCCCTATGCAGTATAGCTGTTGGGTTTTTGTCC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TGGACAAAGGCCACGGCTGTTGTGCTGCGCTTCAGGTTTGTGAGGCTGCGGAGTGGTACCCCCACCATGCACGC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 AAGCACACACACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAACTTGAACTCAC 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TTTTATCATTGGCCTTTTTCCTCTTACTCTGACTTCCTAGCTTAGCTCTTTCCAAAAGGAACTTGAACTTGGCC 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 AAGAGAGGTAAGGAGGCTGAGCAGAGCAGTCTTTGCTCATTCCTGGTTGTTGCCACCCTCATTTAAATGGAAGA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GAGAAAACAGGAGCTTCTTGGCTGTTTGCCAAAATGAATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GCCTTTTTCTCCACCCCAACACAAAAATCTGGAAAGGAAAATAAGTGGGTAGGATTAAGAGCTGTTAGAAGCTG 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 AGGACCAAAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATGAAATTAGCCA 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 AATGATGAGTCCTTCCCTAGCTGGGCATGGTGGGTTCTCTTTTTTTTTTTTTTTTTTTTTTTGTTGTTGTTGTT 4884
Query 1 ---ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCC 71
||||||||||.|||||||||||||||||||||.|||||||.||||||.||||||||||||||||.||||||
Sbjct 4885 GAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTACAGTGGCATGATCTCGGCTCACTGCAACCTCCGCCTCC 4958
Query 72 TGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTA 145
..|||||||||.|||||||.||||||||||||..|.||||||.||||||||.||....||||||..|||||.||
Sbjct 4959 CAGGTTCAAGCGATTCTCCTACCTCAGCCTCCTGATTAGCTGAGATTACAGGCGCCCACCACCACGCCTGGCTA 5032
Query 146 ATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT--------------------- 198
|||||||.|||||||||.||||.||.||||||||||||||.|||||.||.|||
Sbjct 5033 ATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGACCAGGCTGTTCTCAAACTCCTGACCTCAGGTGA 5106
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5107 TCTGCTCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCTGGCCAGGCACTGTGGGTT 5180
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5181 CTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGT 5254
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5255 TGAGGAGGTGGCTTGACTTTCGAATGTAAAACTGACTGTGCCTTAGCATCACCCTGTCCAGTGCCCCTGGGGCA 5328
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5329 GCTGGTAGTGTCCAGAAGAATGGACACCTGCTCCAGATTTAGATGCCCATCTGGGCTTTTGTTTGATTTGCGGC 5402
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5403 GTTCCTGTCTTCTGTAAAGCTAGTGAGTTGTCCCAAGAGACTGATGCCACAGCTTGTTCGCAGTTTACACAAAC 5476
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5477 TCAGCTTTAAAATTCCAAATAGAATCTGACTTGCAAACTCTAGCTGCAGCATGTGGAGCTTCTAGATGTTTACT 5550
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5551 ACCTTGAATGGTTGTCAGTGTCACTGAACCACAGGGGAGAGGAGTATGGGGTAGAGCAATGGTCTGGGCCAAGG 5624
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5625 AATGGTGAGCTTAGGGTCTTCCTCTGACTCCTTACTCCTCAAGGAGGCAGTTAGGGTCCCTCTTAAGCAGGCTT 5698
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5699 CTATTTCTTACCACTAAATTGGTTTCCTTTTTCATCCAGAAGTTAGAACTCCCCAGATATTCACACTATAGGAT 5772
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5773 CTGAATTCCGAGATTCTAAAATATCTTAAACCACAAGAGAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAG 5846
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5847 GCCATCTGTCCCTTCCTCTCCTCTGAGTCAGACAGCTCTGGCAAGCAAGGCTCCTTGGCTAGTTCCTAATGCAC 5920
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5921 TGACAGGAGCCCTCCCATTAAGGACGACTTCTACTCAAAATGCGACTCTCCCTCTGAACTTCAGATGCCTCTGT 5994
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5995 TAGCAGGAAAAGGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGAC 6068
Query 199 ------------------------------------------------------------------ 198
Sbjct 6069 CGTAATGTTATATGTAATGGGAACTATCTTATAAACTTGAAAAAAATAAAGTTTTTATTTTCTATA 6134
