Nucleotide Global Alignment

Description

Query:
TRCN0000467678
Subject:
XR_001750478.2
Aligned Length:
2821
Identities:
170
Gaps:
2627

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCCCGCCCCTCCTCGGACTCTACCCAGTACTGAACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCTCAGGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CATGGCGGTCGCGGGGCCCGCGCCCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTTCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGCAGATACTGAAGGTTTTGTTTCCTTCTTGGTCATCACAAAATGCCTTGATGTTCCTGACCCTTTTGTGCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACCCTACTGGAGCAATTTGTGATCTACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGGTCCTGGGAAACAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGACTTGGAAGGGTTTAAGACTCTGACATTCCTGGCTGTCATGCTCATTGTTCTGAACTCCACGCTGAAGAGCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTGATCAGTTCACCTGCAACCTGCTGTATGTGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACCGCCTCTAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATCGATAACCCGGACCAGCGCATCAGCCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACCGTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAGAAGCTGGAGGGAGATTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGAGCTGGGCATGTGGAGCACA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTGCATCTACCTCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTGCGAGATCCTGGGCGAGAGCGAGTGGGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTGGACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGAGGGACAGAGCCTGCTCATC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ACAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGCCTCTGGACGAGTACACGGGGTGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TATATCCCCTGAAGGAGGTCTACCCCGACTCAGGAGAGATGCCCACTGGGACAAGGAAAGTGATGCCTTCCTTC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ACCCACCCCTTCCCTTATGAAGATCTGCAACCTGTGGTTTCAAAGCCTTCGCCCAGCATTCTGAGGCCCCCACC  1554

Query    1  --------------------------------------------------------------ATGGAGTCTCAC  12
                                                                          |||||||.||||
Sbjct 1555  CCTGCATCATCCATGATGTGCCCTGTCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCAC  1628

Query   13  TCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATT  86
            ||||||||||||.||||||||||||||.|||||||.||||||||||||||||..|||||.||||||||||||||
Sbjct 1629  TCTGTCACCCAGACTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAATT  1702

Query   87  CTCCCACCTCAGCCTC--CCAAGTAGCTGGGATTACAGACGTG--TGCCACCATACCTGGGTAATTTTTGCATT  156
            |.||..||||||||||  ||  |||||||||..|||||  |||  .||||||.|.||||..|||||||||.||.
Sbjct 1703  CCCCTGCCTCAGCCTCTTCC--GTAGCTGGGGCTACAG--GTGCACGCCACCTTGCCTGCCTAATTTTTGTATA  1772

Query  157  TTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT--------------------------------  198
            ||||||.||||..|.||||||||||||||||||||.||||||                                
Sbjct 1773  TTTAGTAGAGACAGCGTTTCACCATGTTGGCCAGGGTGGTCTCCATCTCCTGACCTTGTGATCCACCTGCCTCG  1846

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1847  GCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACTGTGCACAGCCTTGCCCTGTCTATTTTGACCAGCCAGG  1920

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1921  AGGCTCTGGCTTTTTGCAGAAGGCTTCTTTGTTGTGCAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTG  1994

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1995  GAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGA  2068

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2069  TGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGC  2142

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2143  TTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATG  2216

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2217  ACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCTGAAACTCTGTGGAGGAGG  2290

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2291  AAGATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTCTGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTC  2364

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2365  GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAG  2438

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2439  GAGCCACATGGGTCCTGTGCAGGACCCCTAGCAGTGGTGGGCTGAGCCCAGGTCTAGGTTTCTGTGGGGGACAC  2512

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2513  TGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCTTGAAGTGCTGATT  2586

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2587  ACCTACAAATGATTTCAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAAAGAAA  2660

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2661  TGACTCTTGGAGTCAAGAGATCTGGAAATCTTTTAATCAGTTAAATTGTGCAGCAATAGATTTTTAACTTTAAC  2734

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2735  TGACCATTTAAGTTTTTTAATAAGTTTTTTACAAAGAAAAGTTAAACATTAAAAAGAATTACAGCTTTCTGTCT  2808

Query  199  ---------  198
                     
Sbjct 2809  TCTCTATCA  2817

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