Nucleotide Global Alignment
Description
- Query:
- TRCN0000467678
- Subject:
- XR_937537.3
- Aligned Length:
- 4196
- Identities:
- 173
- Gaps:
- 4000
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGAGTTGGGGCAAAACAGGAGGCGTTTCCCTACCCGCATACATCCCCGTCCCCGAGACACCCAATCCCCCCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCCAGCCTGCCCGCGCCTCCCGCCCCCAGCTCCTCGCCCTGGGGACAGCTGGCAGCCCCGCGCGGACCAGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAAAGCCGATCAATCCCGGAGGCGTGGGGGCGGAGGGACGACCCGCCGGGGCTTTCCCGGGCGCTGCTCTCCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGCTGCCCCCTCGCTAGGACCCGGCGGACGCCTCGTCTGGTTTTCACGCCCTCTAGCCCCTACCCCCACACCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAAAACAGAACAGACCCCCATCCCTGGGCTGGAGGACCCGCCTCTTGGCAGCCAGCTGAGAAGGCGCCCCGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGGGGGAAACTGACATCCCATCTAGAGCCGTCCCTCCTCTTCCTCCCCTCCCGACTCTCTGCTCCTTTCCCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCAGAAGTTCAAGGGCCCCCGGCCTCCTGCGCTCCTGCCGCCGGGACCCTCGACCTCCTCAGAGCAGCCGGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCGCCCCGGGAAGATGGCGAGGAGGAGCCGCCACCGCCTCCTCCTGCTGCTGCTGCGCTACCTGGTGGTCGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGGGCTATCATAAGGCCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTAGTCACAGCAGTAGAGTACCAAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCTATTTTAGCCTGCAAAACCCCAAAGAAGACTGTTTCCTCCAGATTAGAGTGGAAGAAACTGGGTCGGAGTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTCCTTTGTCTACTATCAACAGACTCTTCAAGGTGATTTTAAAAATCGAGCTGAGATGATAGATTTCAATATC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGGATCAAAAATGTGACAAGAAGTGATGCGGGGAAATATCGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAGTGGCTCCAGCAGTTCCATCATGTGAAGTACCCTCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTGCTCTGAGTGGAACTGTGGTAGAGCTACGATGTCAAGACAAAGAAGGGAATCCAGCTCCTGAATACACATGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTAAGGATGGCATCCGTTTGCTAGAAAATCCCAGACTTGGCTCCCAAAGCACCAACAGCTCATACACAATGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TACAAAAACTGGAACTCTGCAATTTAATACTGTTTCCAAACTGGACACTGGAGAATATTCCTGTGAAGCCCGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTCTGTTGGATATCGCAGGTGTCCTGGGAAACGAATGCAAGTAGATGATCTCAACATAAGTGGCATCATAGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCCGTAGTAGTTGTGGCCTTAGTGATTTCCGTTTGTGGCCTTGGTGTATGCTATGCTCAGAGGAAAGGCTACTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCAAAAGAAACCTCCTTCCAATCTGGCAGACCTAACTTTGGCTCTATGGGCGTAGAGAGAAGATGGATGACAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACTATCTGAGGCTATGGCAGCTGGGAGTGGAGAAGATATACTGAAGCCATGGCTTCAGACAGTTTGTCATCTCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAATTCCTTTGAAGAATCATCTGCCATTGACTTCCTGTTCCCAGATTTCTGGCTCAATCCTGGTCTCTCAGTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCACACAAAATCCTTTATAATT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TAAAGACTCCACTTTAGAGATACACCAAAGCCACCGTTGTTACACAAGTTATTAAACTATTATAAAACTCTGCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATTTCATTTTAATTTTCATGACTACTAACT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CACCTGAACTTGCTATTTTAAACAAATAGTTCTGTCGACACCTAAAATATAATCTGGCTTCTTGTGTCTGGACT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AAGTTAAAAGAATTAAAATACTTTGTAATGTCCTGGGCTTTGGGAAATGTTAACCACGTCCTAACTTCTAGAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACGTTACTAAAATATAACATACTGATTGTGAAGTCAATCCACAGGTCATGAAAATATAAATCAGACTCTGCACG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGAGTCTGATTTAGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTCTGCCAGAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCCTCTTTTCTCCCCTAATATCATCCTTATTCTGATGCTCGTTCATCACTAACACACCCACAGAAAGGAGGAAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CGGGATGGGTCTTATGCCCAAGGATTTGCACTTTGTGTTTACTTCCATTCCTGGGAACTAAAAGCAACATCAAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGAAATGCCTAATGGCTGGAGCCCACAGGTGTGCACCACAGGATTTGCCTGGTGTGTGTCACTGATTTCTTCAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAACGTAATTTAGATGGTCAAACACAAACCCAAGTGGCTTATTTCACCCCTACTGCTGCTTGCCACTGCTTCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTCTTGTAAGATTTCTTTGAAGAGGATCAGTGACTTTGACATCAGAACTCACCACTGGAGCCTACACAAGTTTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAGATACCTTTCCCTGCAGGAGTGGTGACTTCACATCTTTCTGTCTCTAAAAATTGTGCAGTGACATTCCGGGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAAGTCCCTTAGTCAGGGGTTGACAATTCTGCTTTTGGACAAGGAGGGATGTGGAGGGAAGAAGTAATAGTCTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCAGGAAAATGAGACGAAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGCACAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGCAATGGCTCAAACGAAAAGTGGATCTAATGTGGGTTTCTCAACCGATGAACCACAAAAGCTTCCAGCTACT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATTACAATGTGAAAATTCCAATGATCCGTTTACCAGAGCAATTAGACTATGTTAAAAATTCATATCATTTGTAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTTCTTTTAATTACTGAATTGATATTAAAAACAAAATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GATGAAAAGGTCACTTGCTACCTTTGACAACTATGAACATGATGGTTAATCTTCTTTCTTTTTTTTTTTTTTTT 2960
Query 1 ------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAA-------- 60
|.||||||||||||||||.|||||||||||||.|||||||...|||||||||||||||||
Sbjct 2961 TTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCACAATCTTGGCTCACTGCAACCTCCGCC 3034
Query 61 ---CCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCC 131
||||.||||||..|.||||||||.||||||..|||||||||||||||||||||.|||||.||.|||||.||
Sbjct 3035 TCCCCTCCGCCTCCCAGATTCAAGCACTTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGATTATAGGCGTGTACC 3108
Query 132 ACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------- 198
||||.||||||.|||||||||.| |||||||.||||.|| ||||||||||||||||||||.||||||
Sbjct 3109 ACCACACCTGGCTAATTTTTGTA-TTTTAGTAGAGAAGG-GTTTCACCATGTTGGCCAGGCTGGTCTCAAACCT 3180
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3181 CTGACCTCAAATGATCCACCCCCATCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGCACTGGGCA 3254
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3255 GGTTAATCTTCTTTCAAAAGAGTCTGCTCTTTCTACCCAATTGGCGAAGCAAATCCCCAGGATTCACCGAACAA 3328
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3329 ATGGATTAAGCACCCACTGAGTGCCTAGCATGTGCCTGGACACCAGGCCACCGGGAAGATGCTCCCCCTTTGAC 3402
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3403 TTGTCTATGACATGCTATGTCTCTCACCAGATCCCTTCCTGGAGGTCGGGCTTCTGTAACATGGCTCTGCCCCC 3476
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3477 AAAATAAAATTTTCACCACGAGTCAGGGATCGGCAAACATTTTCTGTAAAGAGCCAGAAAGTAGATATTTTAAG 3550
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3551 TCATAAGGTCCCTGTTAACAACTACTTGACTCTGCCATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAG 3624
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3625 TAGTCATGTCTGTGTTCCAATAAGACTTTATTTACAAAAACAGCAGGCACAGACAAGATTTGGCCCACAGGCAT 3698
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3699 AGATTCCCAACTCATGGTGGTGAAGTACAGAAAAAAACACCTGTCTACAAGCTTTTGTAAGAAATCAGGCTAAA 3772
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3773 TGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCTCTTGCATTGGCATGCCAAGAGG 3846
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3847 ATAGATGACTCTGAAAGACGCCTCTTCAGACATACCTGTCATCACACAAGATCAACTTCTTCAGTTTAAATGAC 3920
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3921 ACAAATCCATATTGTGGAAGGAAAATATGTAGTGCCTTAGCTTCACTAATAGTTGTAAAACTTCTTTTTAAGAC 3994
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3995 ATCAAAGGCTAGAGGATTCATTTTATGCAGTGCGAACATCTAATAACACTCTCTGTGTCAAATATATATTGTAC 4068
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4069 ATTACCTTAAACTATTGTAATAGCTAGGTAAAAATCCTTGTATAAAAGAATGTTTTCCCCCACACAAAGGGCAG 4142
Query 199 ---------------------------------------------------- 198
Sbjct 4143 AGTATTGAGCACTAATTTCCTATTAAAAGTATATATATGTATCTGTGGGTCA 4194
