Nucleotide Global Alignment

Description

Query:
TRCN0000467727
Subject:
NM_001302504.1
Aligned Length:
3072
Identities:
1075
Gaps:
1995

Alignment

Query    1  ATGAATTTCATAAAGGACAATGGCCGAGCCCTTATTCAAAGAATGGGAATGACTGTTATAAAGCAAATCACAGA  74
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAATTTCATAAAGGACAATAGCCGAGCCCTTATTCAAAGAATGGGAATGACTGTTATAAAGCAAATCACAGA  74

Query   75  TGACCTATTTGTATGGAATGTTCTGAATCGCGAAGAAGTAAACATCATTTGCTGCGAGAAGGTGGAGCAGGATG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGACCTATTTGTATGGAATGTTCTGAATCGCGAAGAAGTAAACATCATTTGCTGCGAGAAGGTGGAGCAGGATG  148

Query  149  CTGCTAGAGGGATCATTCACATGATTTTGAAAAAGGGTTCAGAGTCCTGTAACCTCTTTCTTAAATCCCTTAAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTGCTAGAGGGATCATTCACATGATTTTGAAAAAGGGTTCAGAGTCCTGTAACCTCTTTCTTAAATCCCTTAAG  222

Query  223  GAGTGGAACTATCCTCTATTTCAGGACTTGAATGGACAAAGTCTTTTTCATCAGACATCAGAAGGAGACTTGGA  296
            ||||||||||||||||||||||||||||||||||||||||                                  
Sbjct  223  GAGTGGAACTATCCTCTATTTCAGGACTTGAATGGACAAA----------------------------------  262

Query  297  CGATTTGGCTCAGGATTTAAAGGACTTGTACCATACCCCATCTTTTCTGAACTTTTATCCCCTTGGTGAAGATA  370
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query  371  TTGACATTATTTTTAACTTGAAAAGCACCTTCACAGAACCTGTCCTGTGGAGGAAGGACCAACACCATCACCGC  444
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query  445  GTGGAGCAGCTGACCCTGAATGGCCTCCTGCAGGCTCTTCAGAGCCCCTGCATCATTGAAGGGGAATCTGGCAA  518
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query  519  AGGCAAGTCCACTCTGCTGCAGCGAATTGCCATGCTCTGGGGCTCCGGAAAGTGCAAGGCTCTGACCAAGTTCA  592
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query  593  AATTCGTCTTCTTCCTCCGTCTCAGCAGGGCCCAGGGTGGACTTTTTGAAACCCTCTGTGATCAACTCCTGGAT  666
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query  667  ATACCTGGCACAATCAGGAAGCAGACATTCATGGCCATGCTGCTGAAGCTGCGGCAGAGGGTTCTTTTCCTTCT  740
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query  741  TGATGGCTACAATGAATTCAAGCCCCAGAACTGCCCAGAAATCGAAGCCCTGATAAAGGAAAACCACCGCTTCA  814
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query  815  AGAACATGGTCATCGTCACCACTACCACTGAGTGCCTGAGGCACATACGGCAGTTTGGTGCCCTGACTGCTGAG  888
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query  889  GTGGGGGATATGACAGAAGACAGCGCCCAGGCTCTCATCCGAGAAGTGCTGATCAAGGAGCTTGCTGAAGGCTT  962
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query  963  GTTGCTCCAAATTCAGAAATCCAGGTGCTTGAGGAATCTCATGAAGACCCCTCTCTTTGTGGTCATCACTTGTG  1036
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1037  CAATCCAGATGGGTGAAAGTGAGTTCCACTCTCACACACAAACAACGCTGTTCCATACCTTCTATGATCTGTTG  1110
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1111  ATACAGAAAAACAAACACAAACATAAAGGTGTGGCTGCAAGTGACTTCATTCGGAGCCTGGACCACTGTGGAGA  1184
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1185  CCTAGCTCTGGAGGGTGTGTTCTCCCACAAGTTTGATTTCGAACTGCAGGATGTGTCCAGCGTGAATGAGGATG  1258
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1259  TCCTGCTGACAACTGGGCTCCTCTGTAAATATACAGCTCAAAGGTTCAAGCCAAAGTATAAATTCTTTCACAAG  1332
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1333  TCATTCCAGGAGTACACAGCAGGACGAAGACTCAGCAGTTTATTGACGTCTCATGAGCCAGAGGAGGTGACCAA  1406
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1407  GGGGAATGGTTACTTGCAGAAAATGGTTTCCATTTCGGACATTACATCCACTTATAGCAGCCTGCTCCGGTACA  1480
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1481  CCTGTGGGTCATCTGTGGAAGCCACCAGGGCTGTTATGAAGCACCTCGCAGCAGTGTATCAACACGGCTGCCTT  1554
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1555  CTCGGACTTTCCATCGCCAAGAGGCCTCTCTGGAGACAGGAATCTTTGCAAAGTGTGAAAAACACCACTGAGCA  1628
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1629  AGAAATTCTGAAAGCCATAAACATCAATTCCTTTGTAGAGTGTGGCATCCATTTATATCAAGAGAGTACATCCA  1702
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1703  AATCAGCCCTGAGCCAAGAATTTGAAGCTTTCTTTCAAGGTAAAAGCTTATATATCAACTCAGGGAACATCCCC  1776
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1777  GATTACTTATTTGACTTCTTTGAACATTTGCCCAATTGTGCAAGTGCCCTGGACTTCATTAAACTGGACTTTTA  1850
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1851  TGGGGGAGCTATGGCTTCATGGGAAAAGGCTGCAGAAGACACAGGTGGAATCCACATGGAAGAGGCCCCAGAAA  1924
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1925  CCTACATTCCCAGCAGGGCTGTATCTTTGTTCTTCAACTGGAAGCAGGAATTCAGGACTCTGGAGGTCACACTC  1998
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 1999  CGGGATTTCAGCAAGTTGAATAAGCAAGATATCAGATATCTGGGGAAAATATTCAGCTCTGCCACAAGCCTCAG  2072
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 2073  GCTGCAAATAAAGAGATGTGCTGGTGTGGCTGGAAGCCTCAGTTTGGTCCTCAGCACCTGTAAGAACATTTATT  2146
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 2147  CTCTCATGGTGGAAGCCAGTCCCCTCACCATAGAAGATGAGAGGCACATCACATCTGTAACAAACCTGAAAACC  2220
                                                                                      
Sbjct  263  --------------------------------------------------------------------------  262

Query 2221  TTGAGTATTCATGACCTACAGAATCAACGGCTGCCGGGTGGTCTGACTGACAGCTTGGGTAACTTGAAGAACCT  2294
                                                 |||||||||||||||||||||||||||||||||||||
Sbjct  263  -------------------------------------GTGGTCTGACTGACAGCTTGGGTAACTTGAAGAACCT  299

Query 2295  TACAAAGCTCATAATGGATAACATAAAGATGAATGAAGAAGATGCTATAAAACTAGCTGAAGGCCTGAAAAACC  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  300  TACAAAGCTCATAATGGATAACATAAAGATGAATGAAGAAGATGCTATAAAACTAGCTGAAGGCCTGAAAAACC  373

Query 2369  TGAAGAAGATGTGTTTATTTCATTTGACCCACTTGTCTGACATTGGAGAGGGAATGGATTACATAGTCAAGTCT  2442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  374  TGAAGAAGATGTGTTTATTTCATTTGACCCACTTGTCTGACATTGGAGAGGGAATGGATTACATAGTCAAGTCT  447

Query 2443  CTGTCAAGTGAACCCTGTGACCTTGAAGAAATTCAATTAGTCTCCTGCTGCTTGTCTGCAAATGCAGTGAAAAT  2516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  448  CTGTCAAGTGAACCCTGTGACCTTGAAGAAATTCAATTAGTCTCCTGCTGCTTGTCTGCAAATGCAGTGAAAAT  521

Query 2517  CCTAGCTCAGAATCTTCACAATTTGGTCAAACTGAGCATTCTTGATTTATCAGAAAATTACCTGGAAAAAGATG  2590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  522  CCTAGCTCAGAATCTTCACAATTTGGTCAAACTGAGCATTCTTGATTTATCAGAAAATTACCTGGAAAAAGATG  595

Query 2591  GAAATGAAGCTCTTCATGAACTGATCGACAGGATGAACGTGCTAGAACAGCTCACCGCACTGATGCTGCCCTGG  2664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  596  GAAATGAAGCTCTTCATGAACTGATCGACAGGATGAACGTGCTAGAACAGCTCACCGCACTGATGCTGCCCTGG  669

Query 2665  GGCTGTGACGTGCAAGGCAGCCTGAGCAGCCTGTTGAAACATTTGGAGGAGGTCCCACAACTCGTCAAGCTTGG  2738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  670  GGCTGTGACGTGCAAGGCAGCCTGAGCAGCCTGTTGAAACATTTGGAGGAGGTCCCACAACTCGTCAAGCTTGG  743

Query 2739  GTTGAAAAACTGGAGACTCACAGATACAGAGATTAGAATTTTAGGTGCATTTTTTGGAAAGAACCCTCTGAAAA  2812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  744  GTTGAAAAACTGGAGACTCACAGATACAGAGATTAGAATTTTAGGTGCATTTTTTGGAAAGAACCCTCTGAAAA  817

Query 2813  ACTTCCAGCAGTTGAATTTGGCGGGAAATCGTGTGAGCAGTGATGGATGGCTTGCCTTCATGGGTGTATTTGAG  2886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  818  ACTTCCAGCAGTTGAATTTGGCGGGAAATCGTGTGAGCAGTGATGGATGGCTTGCCTTCATGGGTGTATTTGAG  891

Query 2887  AATCTTAAGCAATTAGTGTTTTTTGACTTTAGTACTAAAGAATTTCTACCTGATCCAGCATTAGTCAGAAAACT  2960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  892  AATCTTAAGCAATTAGTGTTTTTTGACTTTAGTACTAAAGAATTTCTACCTGATCCAGCATTAGTCAGAAAACT  965

Query 2961  TAGCCAAGTGTTATCCAAGTTAACTTTTCTGCAAGAAGCTAGGCTTGTTGGGTGGCAATTTGATGATGATGATC  3034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  966  TAGCCAAGTGTTATCCAAGTTAACTTTTCTGCAAGAAGCTAGGCTTGTTGGGTGGCAATTTGATGATGATGATC  1039

Query 3035  TCAGTGTTATTACAGGTGCTTTTAAACTAGTAACCGCT  3072
            ||||||||||||||||||||||||||||||||||.|||
Sbjct 1040  TCAGTGTTATTACAGGTGCTTTTAAACTAGTAACTGCT  1077

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