Nucleotide Global Alignment
Description
- Query:
- TRCN0000467762
- Subject:
- NM_001165948.1
- Aligned Length:
- 4242
- Identities:
- 977
- Gaps:
- 3195
Alignment
Query 1 ATGGCGGACACCGACCTGTTCATGGAATGTGAGGAGGAGGAGTTGGAGCCATGGCAGAAAATCAGTGATGTCAT 74
||||||||||||||||||||.||||||||||||||||||||..|||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGACACCGACCTGTTTATGGAATGTGAGGAGGAGGAACTGGAGCCATGGCAGAAAATCAGTGATGTCAT 74
Query 75 TGAGGACTCTGTAGTTGAAGATTATAATTCAGTGGATAAAACTACCACAGTTTCTGTGAGCCAGCAGCCAGTCT 148
||||||||||||||||||||||||.|||||.||||||||||||||..|.|||||||||||||||||||||||||
Sbjct 75 TGAGGACTCTGTAGTTGAAGATTACAATTCTGTGGATAAAACTACTTCCGTTTCTGTGAGCCAGCAGCCAGTCT 148
Query 149 CGGCTCCAGTGCCCATCGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACATCCACCACCGTTAGTAGCAGC 222
|.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||||.|||.
Sbjct 149 CAGCTCCAGTGCCCATTGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACATCCACTACTGTTAGTAACAGT 222
Query 223 GGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAACAACAATGCTGGCAATCCTTT 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.||||
Sbjct 223 GGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAACAACAATGCTGGTAATACTTT 296
Query 297 GGTCCAGCAAGGTGGACAGCCACTCATCCTGACCCAGAATCCAGCCCCAGGTCTGGGCACAATGGTTACTCAAC 370
||||||||||||||||||||||||||||||.|||||.||.|||||.|||||||||||.||||||||||||||||
Sbjct 297 GGTCCAGCAAGGTGGACAGCCACTCATCCTCACCCAAAACCCAGCACCAGGTCTGGGAACAATGGTTACTCAAC 370
Query 371 CAGTATTGAGGCCTGTTCAGGTCATGCAGAATGCCAATCATGTGACTAGTTCCCCTGTGGCCTCACAACCAATA 444
||||||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.
Sbjct 371 CAGTATTGAGACCTGTCCAGGTCATGCAGAATGCCAATCATGTGACTAGCTCCCCTGTGGCCTCACAACCTATC 444
Query 445 TTTATCACTACGCAGGGATTTCCTGTAAGGAATGTCCGGCCTGTACAAAATGCAATGAATCAGGTTGGGATTGT 518
||.||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCATCACTACCCAGGGATTTCCTGTAAGGAATGTTCGGCCTGTACAAAATGCAATGAATCAGGTTGGGATTGT 518
Query 519 GCTGAACGTACAGCAAGGCCAAACGGTTAGACCAATTACACTAGTTCCAGCCCCAGGTACCCAGTTTGTTAAGC 592
||||||||||||||||||||||||.|||||||||||||||.|.||.||||||||||||||.|||||||||||||
Sbjct 519 GCTGAACGTACAGCAAGGCCAAACAGTTAGACCAATTACATTGGTCCCAGCCCCAGGTACACAGTTTGTTAAGC 592
Query 593 CGACAGTTGGAGTTCCACAAGTGTTCTCCCAGATGACCCCTGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCC 666
||||||||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 593 CGACAGTTGGCGTCCCACAAGTGTTCTCTCAGATGACCCCCGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCC 666
Query 667 ACCACCAACACCTTCACCACCGTCATCCCGGCCACTCTTACCATTCGAAGCACCGTCCCACAGTCCCAGTCCCA 740
||||||||||||||.||||||||||||||.||.|||||.|||||.||||||||.||||||||||||||||||||
Sbjct 667 ACCACCAACACCTTTACCACCGTCATCCCAGCTACTCTCACCATCCGAAGCACTGTCCCACAGTCCCAGTCCCA 740
Query 741 GCAGACCAAGTCCACTCCCAGCACTTCTACCACTCCCACTGCCACACAGCCAACCTCACTGGGGCAACTAGCTG 814
|||||||||||||||.|||||.||.||.||.|||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 741 GCAGACCAAGTCCACCCCCAGTACCTCCACTACTCCCACTGCCACACAACCAACCTCACTGGGGCAGCTAGCTG 814
Query 815 TTCAGTCTCCAGGCCAGTCAAACCAGACCACGAATCCCAAGCTAGCTCCCTCCTTCCCCTCTCCACCTGCAGTG 888
.||||.|||||||||||||.|||||||||.||||||||||.|| ||||
Sbjct 815 GTCAGCCTCCAGGCCAGTCCAACCAGACCTCGAATCCCAAACT---------------------------AGTG 861
Query 889 AGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGTGTTACAGGCGAAAATAGCAATGAAGTGGCCAAATTGGT 962
|||||||||||||||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||
Sbjct 862 AGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGGGTTACAGGTGAAAATAGCAACGAAGTGGCCAAATTGGT 935
Query 963 GAATACCCTTAACACCATCCCTTCCCTGGGCCAGAGTCCTGGGCCAGTGGTGGTGTCCAACAACAGCTCTGCTC 1036
||||||.||||||||..||||||||||||||||||||||||||||.||||||||||||||||||||.||||
Sbjct 936 GAATACTCTTAACACTGTCCCTTCCCTGGGCCAGAGTCCTGGGCCCGTGGTGGTGTCCAACAACAGTTCTG--- 1006
Query 1037 ATGGCTCTCAAAGAACCAGCGGACCTGAGTCTTCAATGAAAGGTACAATAACC--------------------- 1089
|||||||||||||.||.||.||.||||||.|||||| |.|||
Sbjct 1007 ------CTCAAAGAACCAGTGGGCCCGAATCTTCAGTGAAAG------TGACCTCTTCCATCCCAGTGTTTGAC 1068
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1069 CTCCAGGACGGTGGACGGAAAATATGTCCACGGTGTAATGCCCAGTTCCGTGTTACTGAAGCTCTGAGAGGTCA 1142
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1143 CATGTGTTACTGCTGCCCTGAAATGGTTGAGTACCAAAAGAAAGGCAAGTCCCTCGATGCAGAGCCCAGTGTCC 1216
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1217 CATCGGCAGCAAAGCCCTCGTCCCCTGAGAAGACAGCCCCTGTTACTTCCACACCCTCCTCTACACCAATTCCT 1290
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1291 GCTCTCTCACCACCTACCAAAGTACCAGAGCCAAATGAGAATGCTGGAGATGCTGTCCAGACCAAGCTTATTAT 1364
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1365 GCTGGTTGATGATTTCTACTATGGACGGGATGGGGGCAAAGCAGCCCAGCTCACGAGCTTCCCTAAGGTTGCCA 1438
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1439 CGTCTTTCCGATGCCCTCATTGTACTAAGAGGCTAAAGAACAACATTCGATTCATGAACCACATGAAGCACCAC 1512
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1513 GTAGAACTTGATCAACAGAATGGTGAGGTGGATGGTCACACCATCTGCCAGCACTGTTACCGCCAGTTCTCCAC 1586
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1587 CCCTTTCCAGCTCCAGTGCCACTTGGAAAATGTTCATAGTCCCTATGAATCTACTACCAAGTGCAAGATCTGTG 1660
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1661 AGTGGGCCTTTGAAAGCGAGCCCTTGTTCCTCCAGCATATGAAGGACACCCACAAGCCTGGAGAGATGCCTTAT 1734
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1735 GTTTGTCAGGTGTGTCAGTATCGCTCCTCCCTCTACTCTGAAGTAGATGTCCATTTTCGGATGATCCATGAAGA 1808
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1809 TACTCGGCATTTGCTTTGCCCGTATTGCCTAAAAGTCTTCAAAAATGGCAATGCCTTCCAGCAACACTACATGA 1882
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1883 GGCACCAGAAGAGAAATGTTTATCACTGCAACAAATGCCGGCTGCAGTTTCTCTTTGCCAAGGACAAAATTGAA 1956
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1957 CACAAGCTGCAGCACCATAAAACCTTCCGTAAGCCTAAGCAACTGGAAGGCTTGAAACCAGGCACCAAGGTGAC 2030
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2031 AATCCGGGCTTCCCGGGGGCAGCCGAGAACTGTTCCTGTGTCTTCAAATGATGCACCTTCTGGCACCTTGCAGG 2104
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2105 AGGCAGCAGCGCTGACCTCCACTGACCCCCTACCTGTCTTCCTTTATCCCCCTGTCCAGCGCAATATCCAGAAG 2178
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2179 AGAGCTGTTAGGAAAATGAGCGTCATGGGCCGGCAGACATGTCTGGAGTGCAGCTTTGAGATTCCAGATTTTCC 2252
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2253 TAATCATTTCCCTACCTATGTGCATTGTTCTCTCTGCCGATACAGCACCTGCTGCTCTAGAGCTTATGCCAATC 2326
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2327 ACATGATCAACAATCATGTTCCACGGAAAAGTCCCAAGTATTTGGCTTTGTTTAAAAATTCTGTAAGTGGAATC 2400
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2401 AAGCTGGCCTGCACTTCGTGTACCTTTGCTACCTCCGTGGGAGATGCGATGGCCAAGCATTTAGTGTTCAACCC 2474
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2475 CTCCCACAGATCTAGCAACATCTTACCACGGGGGCTCAGTTGGATGTCTCACTTGAGGCCTGGCCAGGCTTCTG 2548
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2549 AACGAGTGTTCGACTGGAGCATGAAGAATACATATCTTCCACCTCCCCTCGTCCCTAACAAAGCTGCCACTGTG 2622
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2623 AAGCCTGTAGGAGTCACCCCAGCGGAGCCCCAAGAGCTGGCAGGTCCTGTGCTCCAGGCACTTCCATCCCCAGC 2696
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2697 CTCAACTGCAACCCCACCAGCAACCCCCACTCACCCACAGCCCTCCGCCCTGCCACCCTCGGCCACAGAGGGGA 2770
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2771 CTGAGTGTCTGAATGTCAGTGAACAGGAAGAAGGAAGCCCTGTCACCCAGGATCCTGAGCCAGCATCAGGTGGT 2844
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2845 GGAGGTGGCAGTGGGGTTGGCAAGAAAGAGCAGCTGTCTGTGAAGAAGCTTCGGGTAGTACTGTTTGCCCTGTG 2918
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2919 CTGCAACACTGAACAGGCGGCTGAACACTTTCGAAACCCCCAGCGGCGAATCCGTCGTTGGCTTCGACGCTTCC 2992
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2993 AGGCCTCTCAGGGAGAGAACTTAGAGGGCAAATATCTCAGCTTTGAGGCAGAAGAAAAACTGGCTGAATGGGTG 3066
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3067 CTGATCCAGAGAGAGCAGCAGCTCCCTGTAAATGAGGAGACCTTGTTTCAGAAGGCCACCAAAATTGGACGCTC 3140
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3141 TTTGGAAGGGGGGTTTAAGATCTCCTATGAGTGGGCTGTGCGCTTCATGCTTCGGCACCACCTCACTCCCCATG 3214
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3215 CCCGGCGAGCTGTCGCCCACACGTTACCGAAGCATGTAGCAGAAAATGCTGGACTCTTCATTGAGTTTGTGCAG 3288
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3289 CGGCAGATTCACAATCAGGACTTACCTTTGTCTATGATTGTGGCTATTGATGAGATCTCTTTGTTCCTGGACAC 3362
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3363 AGAGGTGCTGAGCAGTGATGACCGAAAGGAGAACGCTCTGCAGACAGTGGGCACAGGGGAGCCTTGGTGTGACG 3436
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3437 TCGTGCTGGCTATCCTAGCAGATGGCACTGTCCTCCCCACCCTTGTTTTCTTCCGAGGACAAGCGAATCGGTTC 3510
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3511 GCTAATGTGCCAGACTCTATATTACTAGAGGCCAAAGACAGTGGCTACAGCGACGACGAAATCATGGAGCTTTG 3584
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3585 GTCAACCCGTGTATGGAAGAAGCACACAGCTTGTCAGCACAGCAAAAGCATGTTGGTGATGGACTGTCATCGCA 3658
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3659 CTCACTTGTCAGAAGAAGTACTGGCCCTGCTCAGTGCCTCTAGCACTTTGCCTGCGGTAGTCCCCGCCGGTTGT 3732
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3733 AGCTCCAAAATCCAGCCACTAGATGTATGCATCAAACGAACTGTTAAGAACTTCCTGCACAAAAAGTGGAAGGA 3806
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3807 ACAGGCTCGGGAAATGGCTGACGCTGCTTGTGATTCTGATGTCTTGCTTCAGCTGGTGTTGGTCTGGCTGGGAG 3880
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3881 AGGTGCTGGGTGTCATTGGGGACTCCCCAGAGCTAGTTCAGCGGTCCTTCCTTGTGGCTAGTGTTCTGCCAGGT 3954
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3955 CCCGATGGCAACGTTAACTCACCCACACGCAACGCTGACATGCAGGAGGAGCTCATTGCCTCCCTAGAGGAGCA 4028
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 4029 GCTCAAGCTAAATGGAGAACAGTCTGAGGAGCACTCAGCTTCTGCCCCCCGACCCAGGTCATCTCCTGAAGAGA 4102
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 4103 CAGTCGAGCCTGAAAGCCTTCACCAGCTTTTTGAGGGGGAAAGTGAGACGGAGTCTTTCTATGGCTTTGAGGAA 4176
Query 1090 ------------------------ 1089
Sbjct 4177 GCTGACCTTGATCTGATGGAGATC 4200
