Nucleotide Global Alignment
Description
- Query:
- TRCN0000467762
- Subject:
- XM_006501363.1
- Aligned Length:
- 4242
- Identities:
- 826
- Gaps:
- 3354
Alignment
Query 1 ATGGCGGACACCGACCTGTTCATGGAATGTGAGGAGGAGGAGTTGGAGCCATGGCAGAAAATCAGTGATGTCAT 74
||||||||||||||||||||.||||||||||||||||||||..|||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGACACCGACCTGTTTATGGAATGTGAGGAGGAGGAACTGGAGCCATGGCAGAAAATCAGTGATGTCAT 74
Query 75 TGAGGACTCTGTAGTTGAAGATTATAATTCAGTGGATAAAACTACCACAGTTTCTGTGAGCCAGCAGCCAGTCT 148
||||||||||||||||||||||||.|||||.|||||||||||||| |||
Sbjct 75 TGAGGACTCTGTAGTTGAAGATTACAATTCTGTGGATAAAACTAC------TTC-------------------- 122
Query 149 CGGCTCCAGTGCCCATCGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACATCCACCACCGTTAGTAGCAGC 222
Sbjct 123 -------------------------------------------------------------------------- 122
Query 223 GGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAACAACAATGCTGGCAATCCTTT 296
.|||||.|||.||||
Sbjct 123 -----------------------------------------------------------CGCTGGTAATACTTT 137
Query 297 GGTCCAGCAAGGTGGACAGCCACTCATCCTGACCCAGAATCCAGCCCCAGGTCTGGGCACAATGGTTACTCAAC 370
||||||||||||||||||||||||||||||.|||||.||.|||||.|||||||||||.||||||||||||||||
Sbjct 138 GGTCCAGCAAGGTGGACAGCCACTCATCCTCACCCAAAACCCAGCACCAGGTCTGGGAACAATGGTTACTCAAC 211
Query 371 CAGTATTGAGGCCTGTTCAGGTCATGCAGAATGCCAATCATGTGACTAGTTCCCCTGTGGCCTCACAACCAATA 444
||||||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.
Sbjct 212 CAGTATTGAGACCTGTCCAGGTCATGCAGAATGCCAATCATGTGACTAGCTCCCCTGTGGCCTCACAACCTATC 285
Query 445 TTTATCACTACGCAGGGATTTCCTGTAAGGAATGTCCGGCCTGTACAAAATGCAATGAATCAGGTTGGGATTGT 518
||.||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 286 TTCATCACTACCCAGGGATTTCCTGTAAGGAATGTTCGGCCTGTACAAAATGCAATGAATCAGGTTGGGATTGT 359
Query 519 GCTGAACGTACAGCAAGGCCAAACGGTTAGACCAATTACACTAGTTCCAGCCCCAGGTACCCAGTTTGTTAAGC 592
||||||||||||||||||||||||.|||||||||||||||.|.||.||||||||||||||.|||||||||||||
Sbjct 360 GCTGAACGTACAGCAAGGCCAAACAGTTAGACCAATTACATTGGTCCCAGCCCCAGGTACACAGTTTGTTAAGC 433
Query 593 CGACAGTTGGAGTTCCACAAGTGTTCTCCCAGATGACCCCTGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCC 666
||||||||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 434 CGACAGTTGGCGTCCCACAAGTGTTCTCTCAGATGACCCCCGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCC 507
Query 667 ACCACCAACACCTTCACCACCGTCATCCCGGCCACTCTTACCATTCGAAGCACCGTCCCACAGTCCCAGTCCCA 740
||||||||||||||.||||||||||||||.||.|||||.|||||.||||||||.||||||||||||||||||||
Sbjct 508 ACCACCAACACCTTTACCACCGTCATCCCAGCTACTCTCACCATCCGAAGCACTGTCCCACAGTCCCAGTCCCA 581
Query 741 GCAGACCAAGTCCACTCCCAGCACTTCTACCACTCCCACTGCCACACAGCCAACCTCACTGGGGCAACTAGCTG 814
|||||||||||||||.|||||.||.||.||.|||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 582 GCAGACCAAGTCCACCCCCAGTACCTCCACTACTCCCACTGCCACACAACCAACCTCACTGGGGCAGCTAGCTG 655
Query 815 TTCAGTCTCCAGGCCAGTCAAACCAGACCACGAATCCCAAGCTAGCTCCCTCCTTCCCCTCTCCACCTGCAGTG 888
.||||.|||||||||||||.|||||||||.||||||||||.|| ||||
Sbjct 656 GTCAGCCTCCAGGCCAGTCCAACCAGACCTCGAATCCCAAACT---------------------------AGTG 702
Query 889 AGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGTGTTACAGGCGAAAATAGCAATGAAGTGGCCAAATTGGT 962
|||||||||||||||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||
Sbjct 703 AGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGGGTTACAGGTGAAAATAGCAACGAAGTGGCCAAATTGGT 776
Query 963 GAATACCCTTAACACCATCCCTTCCCTGGGCCAGAGTCCTGGGCCAGTGGTGGTGTCCAACAACAGCTCTGCTC 1036
||||||.||||||||..||||||||||||||||||||||||||||.||||||||||||||||||||.||||
Sbjct 777 GAATACTCTTAACACTGTCCCTTCCCTGGGCCAGAGTCCTGGGCCCGTGGTGGTGTCCAACAACAGTTCTG--- 847
Query 1037 ATGGCTCTCAAAGAACCAGCGGACCTGAGTCTTCAATGAAAGGTACAATAACC--------------------- 1089
|||||||||||||.||.||.||.||||||.|||||| |.|||
Sbjct 848 ------CTCAAAGAACCAGTGGGCCCGAATCTTCAGTGAAAG------TGACCTCTTCCATCCCAGTGTTTGAC 909
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 910 CTCCAGGACGGTGGACGGAAAATATGTCCACGGTGTAATGCCCAGTTCCGTGTTACTGAAGCTCTGAGAGGTCA 983
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 984 CATGTGTTACTGCTGCCCTGAAATGGTTGAGTACCAAAAGAAAGGCAAGTCCCTCGATGCAGAGCCCAGTGTCC 1057
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1058 CATCGGCAGCAAAGCCCTCGTCCCCTGAGAAGACAGCCCCTGTTACTTCCACACCCTCCTCTACACCAATTCCT 1131
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1132 GCTCTCTCACCACCTACCAAAGTACCAGAGCCAAATGAGAATGCTGGAGATGCTGTCCAGACCAAGCTTATTAT 1205
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1206 GCTGGTTGATGATTTCTACTATGGACGGGATGGGGGCAAAGCAGCCCAGCTCACGAGCTTCCCTAAGGTTGCCA 1279
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1280 CGTCTTTCCGATGCCCTCATTGTACTAAGAGGCTAAAGAACAACATTCGATTCATGAACCACATGAAGCACCAC 1353
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1354 GTAGAACTTGATCAACAGAATGGTGAGGTGGATGGTCACACCATCTGCCAGCACTGTTACCGCCAGTTCTCCAC 1427
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1428 CCCTTTCCAGCTCCAGTGCCACTTGGAAAATGTTCATAGTCCCTATGAATCTACTACCAAGTGCAAGATCTGTG 1501
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1502 AGTGGGCCTTTGAAAGCGAGCCCTTGTTCCTCCAGCATATGAAGGACACCCACAAGCCTGGAGAGATGCCTTAT 1575
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1576 GTTTGTCAGGTGTGTCAGTATCGCTCCTCCCTCTACTCTGAAGTAGATGTCCATTTTCGGATGATCCATGAAGA 1649
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1650 TACTCGGCATTTGCTTTGCCCGTATTGCCTAAAAGTCTTCAAAAATGGCAATGCCTTCCAGCAACACTACATGA 1723
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1724 GGCACCAGAAGAGAAATGTTTATCACTGCAACAAATGCCGGCTGCAGTTTCTCTTTGCCAAGGACAAAATTGAA 1797
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1798 CACAAGCTGCAGCACCATAAAACCTTCCGTAAGCCTAAGCAACTGGAAGGCTTGAAACCAGGCACCAAGGTGAC 1871
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1872 AATCCGGGCTTCCCGGGGGCAGCCGAGAACTGTTCCTGTGTCTTCAAATGATGCACCTTCTGGCACCTTGCAGG 1945
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1946 AGGCAGCAGCGCTGACCTCCACTGACCCCCTACCTGTCTTCCTTTATCCCCCTGTCCAGCGCAATATCCAGAAG 2019
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2020 AGAGCTGTTAGGAAAATGAGCGTCATGGGCCGGCAGACATGTCTGGAGTGCAGCTTTGAGATTCCAGATTTTCC 2093
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2094 TAATCATTTCCCTACCTATGTGCATTGTTCTCTCTGCCGATACAGCACCTGCTGCTCTAGAGCTTATGCCAATC 2167
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2168 ACATGATCAACAATCATGTTCCACGGAAAAGTCCCAAGTATTTGGCTTTGTTTAAAAATTCTGTAAGTGGAATC 2241
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2242 AAGCTGGCCTGCACTTCGTGTACCTTTGCTACCTCCGTGGGAGATGCGATGGCCAAGCATTTAGTGTTCAACCC 2315
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2316 CTCCCACAGATCTAGCAACATCTTACCACGGGGGCTCAGTTGGATGTCTCACTTGAGGCCTGGCCAGGCTTCTG 2389
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2390 AACGAGTGTTCGACTGGAGCATGAAGAATACATATCTTCCACCTCCCCTCGTCCCTAACAAAGCTGCCACTGTG 2463
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2464 AAGCCTGTAGGAGTCACCCCAGCGGAGCCCCAAGAGCTGGCAGGTCCTGTGCTCCAGGCACTTCCATCCCCAGC 2537
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2538 CTCAACTGCAACCCCACCAGCAACCCCCACTCACCCACAGCCCTCCGCCCTGCCACCCTCGGCCACAGAGGGGA 2611
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2612 CTGAGTGTCTGAATGTCAGTGAACAGGAAGAAGGAAGCCCTGTCACCCAGGATCCTGAGCCAGCATCAGGTGGT 2685
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2686 GGAGGTGGCAGTGGGGTTGGCAAGAAAGAGCAGCTGTCTGTGAAGAAGCTTCGGGTAGTACTGTTTGCCCTGTG 2759
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2760 CTGCAACACTGAACAGGCGGCTGAACACTTTCGAAACCCCCAGCGGCGAATCCGTCGTTGGCTTCGACGCTTCC 2833
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2834 AGGCCTCTCAGGGAGAGAACTTAGAGGGCAAATATCTCAGCTTTGAGGCAGAAGAAAAACTGGCTGAATGGGTG 2907
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2908 CTGATCCAGAGAGAGCAGCAGCTCCCTGTAAATGAGGAGACCTTGTTTCAGAAGGCCACCAAAATTGGACGCTC 2981
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2982 TTTGGAAGGGGGGTTTAAGATCTCCTATGAGTGGGCTGTGCGCTTCATGCTTCGGCACCACCTCACTCCCCATG 3055
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3056 CCCGGCGAGCTGTCGCCCACACGTTACCGAAGCATGTAGCAGAAAATGCTGGACTCTTCATTGAGTTTGTGCAG 3129
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3130 CGGCAGATTCACAATCAGGACTTACCTTTGTCTATGATTGTGGCTATTGATGAGATCTCTTTGTTCCTGGACAC 3203
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3204 AGAGGTGCTGAGCAGTGATGACCGAAAGGAGAACGCTCTGCAGACAGTGGGCACAGGGGAGCCTTGGTGTGACG 3277
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3278 TCGTGCTGGCTATCCTAGCAGATGGCACTGTCCTCCCCACCCTTGTTTTCTTCCGAGGACAAGCGAATCGGTTC 3351
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3352 GCTAATGTGCCAGACTCTATATTACTAGAGGCCAAAGACAGTGGCTACAGCGACGACGAAATCATGGAGCTTTG 3425
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3426 GTCAACCCGTGTATGGAAGAAGCACACAGCTTGTCAGCACAGCAAAAGCATGTTGGTGATGGACTGTCATCGCA 3499
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3500 CTCACTTGTCAGAAGAAGTACTGGCCCTGCTCAGTGCCTCTAGCACTTTGCCTGCGGTAGTCCCCGCCGGTTGT 3573
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3574 AGCTCCAAAATCCAGCCACTAGATGTATGCATCAAACGAACTGTTAAGAACTTCCTGCACAAAAAGTGGAAGGA 3647
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3648 ACAGGCTCGGGAAATGGCTGACGCTGCTTGTGATTCTGATGTCTTGCTTCAGCTGGTGTTGGTCTGGCTGGGAG 3721
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3722 AGGTGCTGGGTGTCATTGGGGACTCCCCAGAGCTAGTTCAGCGGTCCTTCCTTGTGGCTAGTGTTCTGCCAGGT 3795
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3796 CCCGATGGCAACGTTAACTCACCCACACGCAACGCTGACATGCAGGAGGAGCTCATTGCCTCCCTAGAGGAGCA 3869
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3870 GCTCAAGCTAAATGGAGAACAGTCTGAGGAGCACTCAGCTTCTGCCCCCCGACCCAGGTCATCTCCTGAAGAGA 3943
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3944 CAGTCGAGCCTGAAAGCCTTCACCAGCTTTTTGAGGGGGAAAGTGAGACGGAGTCTTTCTATGGCTTTGAGGAA 4017
Query 1090 ------------------------ 1089
Sbjct 4018 GCTGACCTTGATCTGATGGAGATC 4041
