Nucleotide Global Alignment
Description
- Query:
- TRCN0000467762
- Subject:
- XM_006501364.1
- Aligned Length:
- 4242
- Identities:
- 712
- Gaps:
- 3486
Alignment
Query 1 ATGGCGGACACCGACCTGTTCATGGAATGTGAGGAGGAGGAGTTGGAGCCATGGCAGAAAATCAGTGATGTCAT 74
||||||||||||||||||||.||||||||||||||||||||..|||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGACACCGACCTGTTTATGGAATGTGAGGAGGAGGAACTGGAGCCATGGCAGAAAATCAGTGATGTCAT 74
Query 75 TGAGGACTCTGTAGTTGAAGATTATAATTCAGTGGATAAAACTACCACAGTTTCTGTGAGCCAGCAGCCAGTCT 148
||||||||||||||||||||||||.|||||.||||||||||||||..|.|||||||||||||||||||||||||
Sbjct 75 TGAGGACTCTGTAGTTGAAGATTACAATTCTGTGGATAAAACTACTTCCGTTTCTGTGAGCCAGCAGCCAGTCT 148
Query 149 CGGCTCCAGTGCCCATCGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACATCCACCACCGTTAGTAGCAGC 222
|.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||||.|||.
Sbjct 149 CAGCTCCAGTGCCCATTGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACATCCACTACTGTTAGTAACAGT 222
Query 223 GGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAACAACAATGCTGGCAATCCTTT 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.||||
Sbjct 223 GGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAACAACAATGCTGGTAATACTTT 296
Query 297 GGTCCAGCAAGGTGGACAGCCACTCATCCTGACCCAGAATCCAGCCCCAGGTCTGGGCACAATGGTTACTCAAC 370
||||||||||||||||||||||||||||||.|||||.||.|||||.|||||||||||.||||||||||||||||
Sbjct 297 GGTCCAGCAAGGTGGACAGCCACTCATCCTCACCCAAAACCCAGCACCAGGTCTGGGAACAATGGTTACTCAAC 370
Query 371 CAGTATTGAGGCCTGTTCAGGTCATGCAGAATGCCAATCATGTGACTAGTTCCCCTGTGGCCTCACAACCAATA 444
||||||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.
Sbjct 371 CAGTATTGAGACCTGTCCAGGTCATGCAGAATGCCAATCATGTGACTAGCTCCCCTGTGGCCTCACAACCTATC 444
Query 445 TTTATCACTACGCAGGGATTTCCTGTAAGGAATGTCCGGCCTGTACAAAATGCAATGAATCAGGTTGGGATTGT 518
||.||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCATCACTACCCAGGGATTTCCTGTAAGGAATGTTCGGCCTGTACAAAATGCAATGAATCAGGTTGGGATTGT 518
Query 519 GCTGAACGTACAGCAAGGCCAAACGGTTAGACCAATTACACTAGTTCCAGCCCCAGGTACCCAGTTTGTTAAGC 592
||||||||||||||||||||||||.|||||||||||||||
Sbjct 519 GCTGAACGTACAGCAAGGCCAAACAGTTAGACCAATTACA---------------------------------- 558
Query 593 CGACAGTTGGAGTTCCACAAGTGTTCTCCCAGATGACCCCTGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCC 666
|||| |||
Sbjct 559 ------TTGG---TCC---------------------------------------------------------- 565
Query 667 ACCACCAACACCTTCACCACCGTCATCCCGGCCACTCTTACCATTCGAAGCACCGTCCCACAGTCCCAGTCCCA 740
Sbjct 566 -------------------------------------------------------------------------- 565
Query 741 GCAGACCAAGTCCACTCCCAGCACTTCTACCACTCCCACTGCCACACAGCCAACCTCACTGGGGCAACTAGCTG 814
Sbjct 566 -------------------------------------------------------------------------- 565
Query 815 TTCAGTCTCCAGGCCAGTCAAACCAGACCACGAATCCCAAGCTAGCTCCCTCCTTCCCCTCTCCACCTGCAGTG 888
|||||
Sbjct 566 ---------------------------------------------------------------------CAGTG 570
Query 889 AGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGTGTTACAGGCGAAAATAGCAATGAAGTGGCCAAATTGGT 962
|||||||||||||||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||
Sbjct 571 AGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGGGTTACAGGTGAAAATAGCAACGAAGTGGCCAAATTGGT 644
Query 963 GAATACCCTTAACACCATCCCTTCCCTGGGCCAGAGTCCTGGGCCAGTGGTGGTGTCCAACAACAGCTCTGCTC 1036
||||||.||||||||..||||||||||||||||||||||||||||.||||||||||||||||||||.||||
Sbjct 645 GAATACTCTTAACACTGTCCCTTCCCTGGGCCAGAGTCCTGGGCCCGTGGTGGTGTCCAACAACAGTTCTG--- 715
Query 1037 ATGGCTCTCAAAGAACCAGCGGACCTGAGTCTTCAATGAAAGGTACAATAACC--------------------- 1089
|||||||||||||.||.||.||.||||||.|||||| |.|||
Sbjct 716 ------CTCAAAGAACCAGTGGGCCCGAATCTTCAGTGAAAG------TGACCTCTTCCATCCCAGTGTTTGAC 777
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 778 CTCCAGGACGGTGGACGGAAAATATGTCCACGGTGTAATGCCCAGTTCCGTGTTACTGAAGCTCTGAGAGGTCA 851
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 852 CATGTGTTACTGCTGCCCTGAAATGGTTGAGTACCAAAAGAAAGGCAAGTCCCTCGATGCAGAGCCCAGTGTCC 925
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 926 CATCGGCAGCAAAGCCCTCGTCCCCTGAGAAGACAGCCCCTGTTACTTCCACACCCTCCTCTACACCAATTCCT 999
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1000 GCTCTCTCACCACCTACCAAAGTACCAGAGCCAAATGAGAATGCTGGAGATGCTGTCCAGACCAAGCTTATTAT 1073
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1074 GCTGGTTGATGATTTCTACTATGGACGGGATGGGGGCAAAGCAGCCCAGCTCACGAGCTTCCCTAAGGTTGCCA 1147
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1148 CGTCTTTCCGATGCCCTCATTGTACTAAGAGGCTAAAGAACAACATTCGATTCATGAACCACATGAAGCACCAC 1221
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1222 GTAGAACTTGATCAACAGAATGGTGAGGTGGATGGTCACACCATCTGCCAGCACTGTTACCGCCAGTTCTCCAC 1295
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1296 CCCTTTCCAGCTCCAGTGCCACTTGGAAAATGTTCATAGTCCCTATGAATCTACTACCAAGTGCAAGATCTGTG 1369
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1370 AGTGGGCCTTTGAAAGCGAGCCCTTGTTCCTCCAGCATATGAAGGACACCCACAAGCCTGGAGAGATGCCTTAT 1443
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1444 GTTTGTCAGGTGTGTCAGTATCGCTCCTCCCTCTACTCTGAAGTAGATGTCCATTTTCGGATGATCCATGAAGA 1517
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1518 TACTCGGCATTTGCTTTGCCCGTATTGCCTAAAAGTCTTCAAAAATGGCAATGCCTTCCAGCAACACTACATGA 1591
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1592 GGCACCAGAAGAGAAATGTTTATCACTGCAACAAATGCCGGCTGCAGTTTCTCTTTGCCAAGGACAAAATTGAA 1665
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1666 CACAAGCTGCAGCACCATAAAACCTTCCGTAAGCCTAAGCAACTGGAAGGCTTGAAACCAGGCACCAAGGTGAC 1739
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1740 AATCCGGGCTTCCCGGGGGCAGCCGAGAACTGTTCCTGTGTCTTCAAATGATGCACCTTCTGGCACCTTGCAGG 1813
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1814 AGGCAGCAGCGCTGACCTCCACTGACCCCCTACCTGTCTTCCTTTATCCCCCTGTCCAGCGCAATATCCAGAAG 1887
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1888 AGAGCTGTTAGGAAAATGAGCGTCATGGGCCGGCAGACATGTCTGGAGTGCAGCTTTGAGATTCCAGATTTTCC 1961
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1962 TAATCATTTCCCTACCTATGTGCATTGTTCTCTCTGCCGATACAGCACCTGCTGCTCTAGAGCTTATGCCAATC 2035
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2036 ACATGATCAACAATCATGTTCCACGGAAAAGTCCCAAGTATTTGGCTTTGTTTAAAAATTCTGTAAGTGGAATC 2109
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2110 AAGCTGGCCTGCACTTCGTGTACCTTTGCTACCTCCGTGGGAGATGCGATGGCCAAGCATTTAGTGTTCAACCC 2183
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2184 CTCCCACAGATCTAGCAACATCTTACCACGGGGGCTCAGTTGGATGTCTCACTTGAGGCCTGGCCAGGCTTCTG 2257
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2258 AACGAGTGTTCGACTGGAGCATGAAGAATACATATCTTCCACCTCCCCTCGTCCCTAACAAAGCTGCCACTGTG 2331
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2332 AAGCCTGTAGGAGTCACCCCAGCGGAGCCCCAAGAGCTGGCAGGTCCTGTGCTCCAGGCACTTCCATCCCCAGC 2405
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2406 CTCAACTGCAACCCCACCAGCAACCCCCACTCACCCACAGCCCTCCGCCCTGCCACCCTCGGCCACAGAGGGGA 2479
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2480 CTGAGTGTCTGAATGTCAGTGAACAGGAAGAAGGAAGCCCTGTCACCCAGGATCCTGAGCCAGCATCAGGTGGT 2553
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2554 GGAGGTGGCAGTGGGGTTGGCAAGAAAGAGCAGCTGTCTGTGAAGAAGCTTCGGGTAGTACTGTTTGCCCTGTG 2627
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2628 CTGCAACACTGAACAGGCGGCTGAACACTTTCGAAACCCCCAGCGGCGAATCCGTCGTTGGCTTCGACGCTTCC 2701
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2702 AGGCCTCTCAGGGAGAGAACTTAGAGGGCAAATATCTCAGCTTTGAGGCAGAAGAAAAACTGGCTGAATGGGTG 2775
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2776 CTGATCCAGAGAGAGCAGCAGCTCCCTGTAAATGAGGAGACCTTGTTTCAGAAGGCCACCAAAATTGGACGCTC 2849
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2850 TTTGGAAGGGGGGTTTAAGATCTCCTATGAGTGGGCTGTGCGCTTCATGCTTCGGCACCACCTCACTCCCCATG 2923
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2924 CCCGGCGAGCTGTCGCCCACACGTTACCGAAGCATGTAGCAGAAAATGCTGGACTCTTCATTGAGTTTGTGCAG 2997
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2998 CGGCAGATTCACAATCAGGACTTACCTTTGTCTATGATTGTGGCTATTGATGAGATCTCTTTGTTCCTGGACAC 3071
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3072 AGAGGTGCTGAGCAGTGATGACCGAAAGGAGAACGCTCTGCAGACAGTGGGCACAGGGGAGCCTTGGTGTGACG 3145
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3146 TCGTGCTGGCTATCCTAGCAGATGGCACTGTCCTCCCCACCCTTGTTTTCTTCCGAGGACAAGCGAATCGGTTC 3219
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3220 GCTAATGTGCCAGACTCTATATTACTAGAGGCCAAAGACAGTGGCTACAGCGACGACGAAATCATGGAGCTTTG 3293
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3294 GTCAACCCGTGTATGGAAGAAGCACACAGCTTGTCAGCACAGCAAAAGCATGTTGGTGATGGACTGTCATCGCA 3367
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3368 CTCACTTGTCAGAAGAAGTACTGGCCCTGCTCAGTGCCTCTAGCACTTTGCCTGCGGTAGTCCCCGCCGGTTGT 3441
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3442 AGCTCCAAAATCCAGCCACTAGATGTATGCATCAAACGAACTGTTAAGAACTTCCTGCACAAAAAGTGGAAGGA 3515
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3516 ACAGGCTCGGGAAATGGCTGACGCTGCTTGTGATTCTGATGTCTTGCTTCAGCTGGTGTTGGTCTGGCTGGGAG 3589
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3590 AGGTGCTGGGTGTCATTGGGGACTCCCCAGAGCTAGTTCAGCGGTCCTTCCTTGTGGCTAGTGTTCTGCCAGGT 3663
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3664 CCCGATGGCAACGTTAACTCACCCACACGCAACGCTGACATGCAGGAGGAGCTCATTGCCTCCCTAGAGGAGCA 3737
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3738 GCTCAAGCTAAATGGAGAACAGTCTGAGGAGCACTCAGCTTCTGCCCCCCGACCCAGGTCATCTCCTGAAGAGA 3811
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3812 CAGTCGAGCCTGAAAGCCTTCACCAGCTTTTTGAGGGGGAAAGTGAGACGGAGTCTTTCTATGGCTTTGAGGAA 3885
Query 1090 ------------------------ 1089
Sbjct 3886 GCTGACCTTGATCTGATGGAGATC 3909
