Nucleotide Global Alignment
Description
- Query:
- TRCN0000467762
- Subject:
- XM_011240090.2
- Aligned Length:
- 4242
- Identities:
- 1004
- Gaps:
- 3168
Alignment
Query 1 ATGGCGGACACCGACCTGTTCATGGAATGTGAGGAGGAGGAGTTGGAGCCATGGCAGAAAATCAGTGATGTCAT 74
||||||||||||||||||||.||||||||||||||||||||..|||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGACACCGACCTGTTTATGGAATGTGAGGAGGAGGAACTGGAGCCATGGCAGAAAATCAGTGATGTCAT 74
Query 75 TGAGGACTCTGTAGTTGAAGATTATAATTCAGTGGATAAAACTACCACAGTTTCTGTGAGCCAGCAGCCAGTCT 148
||||||||||||||||||||||||.|||||.||||||||||||||..|.|||||||||||||||||||||||||
Sbjct 75 TGAGGACTCTGTAGTTGAAGATTACAATTCTGTGGATAAAACTACTTCCGTTTCTGTGAGCCAGCAGCCAGTCT 148
Query 149 CGGCTCCAGTGCCCATCGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACATCCACCACCGTTAGTAGCAGC 222
|.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||||.|||.
Sbjct 149 CAGCTCCAGTGCCCATTGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACATCCACTACTGTTAGTAACAGT 222
Query 223 GGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAACAACAATGCTGGCAATCCTTT 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.||||
Sbjct 223 GGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAACAACAATGCTGGTAATACTTT 296
Query 297 GGTCCAGCAAGGTGGACAGCCACTCATCCTGACCCAGAATCCAGCCCCAGGTCTGGGCACAATGGTTACTCAAC 370
||||||||||||||||||||||||||||||.|||||.||.|||||.|||||||||||.||||||||||||||||
Sbjct 297 GGTCCAGCAAGGTGGACAGCCACTCATCCTCACCCAAAACCCAGCACCAGGTCTGGGAACAATGGTTACTCAAC 370
Query 371 CAGTATTGAGGCCTGTTCAGGTCATGCAGAATGCCAATCATGTGACTAGTTCCCCTGTGGCCTCACAACCAATA 444
||||||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.
Sbjct 371 CAGTATTGAGACCTGTCCAGGTCATGCAGAATGCCAATCATGTGACTAGCTCCCCTGTGGCCTCACAACCTATC 444
Query 445 TTTATCACTACGCAGGGATTTCCTGTAAGGAATGTCCGGCCTGTACAAAATGCAATGAATCAGGTTGGGATTGT 518
||.||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCATCACTACCCAGGGATTTCCTGTAAGGAATGTTCGGCCTGTACAAAATGCAATGAATCAGGTTGGGATTGT 518
Query 519 GCTGAACGTACAGCAAGGCCAAACGGTTAGACCAATTACACTAGTTCCAGCCCCAGGTACCCAGTTTGTTAAGC 592
||||||||||||||||||||||||.|||||||||||||||.|.||.||||||||||||||.|||||||||||||
Sbjct 519 GCTGAACGTACAGCAAGGCCAAACAGTTAGACCAATTACATTGGTCCCAGCCCCAGGTACACAGTTTGTTAAGC 592
Query 593 CGACAGTTGGAGTTCCACAAGTGTTCTCCCAGATGACCCCTGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCC 666
||||||||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 593 CGACAGTTGGCGTCCCACAAGTGTTCTCTCAGATGACCCCCGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCC 666
Query 667 ACCACCAACACCTTCACCACCGTCATCCCGGCCACTCTTACCATTCGAAGCACCGTCCCACAGTCCCAGTCCCA 740
||||||||||||||.||||||||||||||.||.|||||.|||||.||||||||.||||||||||||||||||||
Sbjct 667 ACCACCAACACCTTTACCACCGTCATCCCAGCTACTCTCACCATCCGAAGCACTGTCCCACAGTCCCAGTCCCA 740
Query 741 GCAGACCAAGTCCACTCCCAGCACTTCTACCACTCCCACTGCCACACAGCCAACCTCACTGGGGCAACTAGCTG 814
|||||||||||||||.|||||.||.||.||.|||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 741 GCAGACCAAGTCCACCCCCAGTACCTCCACTACTCCCACTGCCACACAACCAACCTCACTGGGGCAGCTAGCTG 814
Query 815 TTCAGTCTCCAGGCCAGTCAAACCAGACCACGAATCCCAAGCTAGCTCCCTCCTTCCCCTCTCCACCTGCAGTG 888
.||||.|||||||||||||.|||||||||.||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 815 GTCAGCCTCCAGGCCAGTCCAACCAGACCTCGAATCCCAAACTAGCTCCCTCCTTCCCCTCTCCACCTGCAGTG 888
Query 889 AGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGTGTTACAGGCGAAAATAGCAATGAAGTGGCCAAATTGGT 962
|||||||||||||||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||
Sbjct 889 AGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGGGTTACAGGTGAAAATAGCAACGAAGTGGCCAAATTGGT 962
Query 963 GAATACCCTTAACACCATCCCTTCCCTGGGCCAGAGTCCTGGGCCAGTGGTGGTGTCCAACAACAGCTCTGCTC 1036
||||||.||||||||..||||||||||||||||||||||||||||.||||||||||||||||||||.||||
Sbjct 963 GAATACTCTTAACACTGTCCCTTCCCTGGGCCAGAGTCCTGGGCCCGTGGTGGTGTCCAACAACAGTTCTG--- 1033
Query 1037 ATGGCTCTCAAAGAACCAGCGGACCTGAGTCTTCAATGAAAGGTACAATAACC--------------------- 1089
|||||||||||||.||.||.||.||||||.|||||| |.|||
Sbjct 1034 ------CTCAAAGAACCAGTGGGCCCGAATCTTCAGTGAAAG------TGACCTCTTCCATCCCAGTGTTTGAC 1095
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1096 CTCCAGGACGGTGGACGGAAAATATGTCCACGGTGTAATGCCCAGTTCCGTGTTACTGAAGCTCTGAGAGGTCA 1169
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1170 CATGTGTTACTGCTGCCCTGAAATGGTTGAGTACCAAAAGAAAGGCAAGTCCCTCGATGCAGAGCCCAGTGTCC 1243
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1244 CATCGGCAGCAAAGCCCTCGTCCCCTGAGAAGACAGCCCCTGTTACTTCCACACCCTCCTCTACACCAATTCCT 1317
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1318 GCTCTCTCACCACCTACCAAAGTACCAGAGCCAAATGAGAATGCTGGAGATGCTGTCCAGACCAAGCTTATTAT 1391
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1392 GCTGGTTGATGATTTCTACTATGGACGGGATGGGGGCAAAGCAGCCCAGCTCACGAGCTTCCCTAAGGTTGCCA 1465
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1466 CGTCTTTCCGATGCCCTCATTGTACTAAGAGGCTAAAGAACAACATTCGATTCATGAACCACATGAAGCACCAC 1539
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1540 GTAGAACTTGATCAACAGAATGGTGAGGTGGATGGTCACACCATCTGCCAGCACTGTTACCGCCAGTTCTCCAC 1613
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1614 CCCTTTCCAGCTCCAGTGCCACTTGGAAAATGTTCATAGTCCCTATGAATCTACTACCAAGTGCAAGATCTGTG 1687
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1688 AGTGGGCCTTTGAAAGCGAGCCCTTGTTCCTCCAGCATATGAAGGACACCCACAAGCCTGGAGAGATGCCTTAT 1761
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1762 GTTTGTCAGGTGTGTCAGTATCGCTCCTCCCTCTACTCTGAAGTAGATGTCCATTTTCGGATGATCCATGAAGA 1835
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1836 TACTCGGCATTTGCTTTGCCCGTATTGCCTAAAAGTCTTCAAAAATGGCAATGCCTTCCAGCAACACTACATGA 1909
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1910 GGCACCAGAAGAGAAATGTTTATCACTGCAACAAATGCCGGCTGCAGTTTCTCTTTGCCAAGGACAAAATTGAA 1983
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1984 CACAAGCTGCAGCACCATAAAACCTTCCGTAAGCCTAAGCAACTGGAAGGCTTGAAACCAGGCACCAAGGTGAC 2057
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2058 AATCCGGGCTTCCCGGGGGCAGCCGAGAACTGTTCCTGTGTCTTCAAATGATGCACCTTCTGGCACCTTGCAGG 2131
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2132 AGGCAGCAGCGCTGACCTCCACTGACCCCCTACCTGTCTTCCTTTATCCCCCTGTCCAGCGCAATATCCAGAAG 2205
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2206 AGAGCTGTTAGGAAAATGAGCGTCATGGGCCGGCAGACATGTCTGGAGTGCAGCTTTGAGATTCCAGATTTTCC 2279
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2280 TAATCATTTCCCTACCTATGTGCATTGTTCTCTCTGCCGATACAGCACCTGCTGCTCTAGAGCTTATGCCAATC 2353
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2354 ACATGATCAACAATCATGTTCCACGGAAAAGTCCCAAGTATTTGGCTTTGTTTAAAAATTCTGTAAGTGGAATC 2427
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2428 AAGCTGGCCTGCACTTCGTGTACCTTTGCTACCTCCGTGGGAGATGCGATGGCCAAGCATTTAGTGTTCAACCC 2501
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2502 CTCCCACAGATCTAGCAACATCTTACCACGGGGGCTCAGTTGGATGTCTCACTTGAGGCCTGGCCAGGCTTCTG 2575
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2576 AACGAGTGTTCGACTGGAGCATGAAGAATACATATCTTCCACCTCCCCTCGTCCCTAACAAAGCTGCCACTGTG 2649
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2650 AAGCCTGTAGGAGTCACCCCAGCGGAGCCCCAAGAGCTGGCAGGTCCTGTGCTCCAGGCACTTCCATCCCCAGC 2723
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2724 CTCAACTGCAACCCCACCAGCAACCCCCACTCACCCACAGCCCTCCGCCCTGCCACCCTCGGCCACAGAGGGGA 2797
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2798 CTGAGTGTCTGAATGTCAGTGAACAGGAAGAAGGAAGCCCTGTCACCCAGGATCCTGAGCCAGCATCAGGTGGT 2871
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2872 GGAGGTGGCAGTGGGGTTGGCAAGAAAGAGCAGCTGTCTGTGAAGAAGCTTCGGGTAGTACTGTTTGCCCTGTG 2945
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 2946 CTGCAACACTGAACAGGCGGCTGAACACTTTCGAAACCCCCAGCGGCGAATCCGTCGTTGGCTTCGACGCTTCC 3019
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3020 AGGCCTCTCAGGGAGAGAACTTAGAGGGCAAATATCTCAGCTTTGAGGCAGAAGAAAAACTGGCTGAATGGGTG 3093
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3094 CTGATCCAGAGAGAGCAGCAGCTCCCTGTAAATGAGGAGACCTTGTTTCAGAAGGCCACCAAAATTGGACGCTC 3167
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3168 TTTGGAAGGGGGGTTTAAGATCTCCTATGAGTGGGCTGTGCGCTTCATGCTTCGGCACCACCTCACTCCCCATG 3241
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3242 CCCGGCGAGCTGTCGCCCACACGTTACCGAAGCATGTAGCAGAAAATGCTGGACTCTTCATTGAGTTTGTGCAG 3315
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3316 CGGCAGATTCACAATCAGGACTTACCTTTGTCTATGATTGTGGCTATTGATGAGATCTCTTTGTTCCTGGACAC 3389
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3390 AGAGGTGCTGAGCAGTGATGACCGAAAGGAGAACGCTCTGCAGACAGTGGGCACAGGGGAGCCTTGGTGTGACG 3463
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3464 TCGTGCTGGCTATCCTAGCAGATGGCACTGTCCTCCCCACCCTTGTTTTCTTCCGAGGACAAGCGAATCGGTTC 3537
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3538 GCTAATGTGCCAGACTCTATATTACTAGAGGCCAAAGACAGTGGCTACAGCGACGACGAAATCATGGAGCTTTG 3611
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3612 GTCAACCCGTGTATGGAAGAAGCACACAGCTTGTCAGCACAGCAAAAGCATGTTGGTGATGGACTGTCATCGCA 3685
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3686 CTCACTTGTCAGAAGAAGTACTGGCCCTGCTCAGTGCCTCTAGCACTTTGCCTGCGGTAGTCCCCGCCGGTTGT 3759
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3760 AGCTCCAAAATCCAGCCACTAGATGTATGCATCAAACGAACTGTTAAGAACTTCCTGCACAAAAAGTGGAAGGA 3833
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3834 ACAGGCTCGGGAAATGGCTGACGCTGCTTGTGATTCTGATGTCTTGCTTCAGCTGGTGTTGGTCTGGCTGGGAG 3907
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3908 AGGTGCTGGGTGTCATTGGGGACTCCCCAGAGCTAGTTCAGCGGTCCTTCCTTGTGGCTAGTGTTCTGCCAGGT 3981
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 3982 CCCGATGGCAACGTTAACTCACCCACACGCAACGCTGACATGCAGGAGGAGCTCATTGCCTCCCTAGAGGAGCA 4055
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 4056 GCTCAAGCTAAATGGAGAACAGTCTGAGGAGCACTCAGCTTCTGCCCCCCGACCCAGGTCATCTCCTGAAGAGA 4129
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 4130 CAGTCGAGCCTGAAAGCCTTCACCAGCTTTTTGAGGGGGAAAGTGAGACGGAGTCTTTCTATGGCTTTGAGGAA 4203
Query 1090 ------------------------ 1089
Sbjct 4204 GCTGACCTTGATCTGATGGAGATC 4227
