Nucleotide Global Alignment

Description

Query:
TRCN0000467762
Subject:
XM_017000744.1
Aligned Length:
4257
Identities:
1082
Gaps:
3174

Alignment

Query    1  ---------------------ATGGCGGACACCGACCTGTTCATGGAATGTGAGGAGGAGGAGTTGGAGCCATG  53
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAGAGGGGGATGGGGCCGCATGGCGGACACCGACCTGTTCATGGAATGTGAGGAGGAGGAGTTGGAGCCATG  74

Query   54  GCAGAAAATCAGTGATGTCATTGAGGACTCTGTAGTTGAAGATTATAATTCAGTGGATAAAACTACCACAGTTT  127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCAGAAAATCAGTGATGTCATTGAGGACTCTGTAGTTGAAGATTATAATTCAGTGGATAAAACTACCACAGTTT  148

Query  128  CTGTGAGCCAGCAGCCAGTCTCGGCTCCAGTGCCCATCGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACA  201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTGTGAGCCAGCAGCCAGTCTCGGCTCCAGTGCCCATCGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACA  222

Query  202  TCCACCACCGTTAGTAGCAGCGGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAA  275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCCACCACCGTTAGTAGCAGCGGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAA  296

Query  276  CAACAATGCTGGCAATCCTTTGGTCCAGCAAGGTGGACAGCCACTCATCCTGACCCAGAATCCAGCCCCAGGTC  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAACAATGCTGGCAATCCTTTGGTCCAGCAAGGTGGACAGCCACTCATCCTGACCCAGAATCCAGCCCCAGGTC  370

Query  350  TGGGCACAATGGTTACTCAACCAGTATTGAGGCCTGTTCAGGTCATGCAGAATGCCAATCATGTGACTAGTTCC  423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGGCACAATGGTTACTCAACCAGTATTGAGGCCTGTTCAGGTCATGCAGAATGCCAATCATGTGACTAGTTCC  444

Query  424  CCTGTGGCCTCACAACCAATATTTATCACTACGCAGGGATTTCCTGTAAGGAATGTCCGGCCTGTACAAAATGC  497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCTGTGGCCTCACAACCAATATTTATCACTACGCAGGGATTTCCTGTAAGGAATGTCCGGCCTGTACAAAATGC  518

Query  498  AATGAATCAGGTTGGGATTGTGCTGAACGTACAGCAAGGCCAAACGGTTAGACCAATTACACTAGTTCCAGCCC  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AATGAATCAGGTTGGGATTGTGCTGAACGTACAGCAAGGCCAAACGGTTAGACCAATTACACTAGTTCCAGCCC  592

Query  572  CAGGTACCCAGTTTGTTAAGCCGACAGTTGGAGTTCCACAAGTGTTCTCCCAGATGACCCCTGTGAGGCCAGGC  645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAGGTACCCAGTTTGTTAAGCCGACAGTTGGAGTTCCACAAGTGTTCTCCCAGATGACCCCTGTGAGGCCAGGC  666

Query  646  TCCACAATGCCTGTGAGGCCCACCACCAACACCTTCACCACCGTCATCCCGGCCACTCTTACCATTCGAAGCAC  719
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TCCACAATGCCTGTGAGGCCCACCACCAACACCTTCACCACCGTCATCCCGGCCACTCTTACCATTCGAAGCAC  740

Query  720  CGTCCCACAGTCCCAGTCCCAGCAGACCAAGTCCACTCCCAGCACTTCTACCACTCCCACTGCCACACAGCCAA  793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CGTCCCACAGTCCCAGTCCCAGCAGACCAAGTCCACTCCCAGCACTTCTACCACTCCCACTGCCACACAGCCAA  814

Query  794  CCTCACTGGGGCAACTAGCTGTTCAGTCTCCAGGCCAGTCAAACCAGACCACGAATCCCAAGCTAGCTCCCTCC  867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCTCACTGGGGCAACTAGCTGTTCAGTCTCCAGGCCAGTCAAACCAGACCACGAATCCCAAGCTAGCTCCCTCC  888

Query  868  TTCCCCTCTCCACCTGCAGTGAGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGTGTTACAGGCGAAAATAG  941
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTCCCCTCTCCACCTGCAGTGAGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGTGTTACAGGCGAAAATAG  962

Query  942  CAATGAAGTGGCCAAATTGGTGAATACCCTTAACACCATCCCTTCCCTGGGCCAGAGTCCTGGGCCAGTGGTGG  1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CAATGAAGTGGCCAAATTGGTGAATACCCTTAACACCATCCCTTCCCTGGGCCAGAGTCCTGGGCCAGTGGTGG  1036

Query 1016  TGTCCAACAACAGCTCTGCTCATGGCTCTCAAAGAACCAGCGGACCTGAGTCTTCAATGAAAGGTACAATAACC  1089
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |.|||
Sbjct 1037  TGTCCAACAACAGCTCTGCTCATGGCTCTCAAAGAACCAGCGGACCTGAGTCTTCAATGAAAG------TGACC  1104

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1105  TCTTCCATCCCAGTATTTGACCTCCAGGATGGTGGACGGAAAATATGTCCACGATGTAATGCTCAATTTCGTGT  1178

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1179  TACTGAAGCTTTGAGAGGTCACATGTGTTACTGTTGCCCAGAAATGGTTGAATACCAGAAGAAAGGAAAGTCCC  1252

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1253  TGGATTCAGAACCCAGTGTCCCATCAGCAGCAAAGCCCCCATCCCCTGAGAAAACAGCTCCTGTTGCTTCCACA  1326

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1327  CCCTCTTCTACACCTATTCCTGCTCTGTCACCGCCTACCAAAGTACCAGAACCAAATGAGAACGTGGGCGATGC  1400

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1401  CGTCCAGACCAAACTCATTATGCTTGTAGATGACTTCTACTATGGACGGGATGGTGGCAAAGTAGCCCAGCTCA  1474

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1475  CAAATTTCCCTAAGGTCGCCACATCTTTCCGATGCCCACATTGTACCAAAAGGCTAAAAAACAATATTCGATTC  1548

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1549  ATGAACCATATGAAACACCACGTAGAACTCGATCAGCAGAACGGTGAGGTAGATGGTCACACTATCTGCCAGCA  1622

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1623  CTGTTACCGCCAGTTTTCCACTCCCTTCCAGCTTCAGTGCCACTTGGAAAATGTTCATAGTCCCTATGAATCTA  1696

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1697  CTACCAAGTGCAAGATCTGTGAATGGGCGTTTGAAAGTGAGCCACTATTTCTCCAGCATATGAAGGATACTCAT  1770

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1771  AAGCCTGGAGAGATGCCTTATGTTTGCCAGGTGTGTCAATATCGCTCCTCACTCTACTCTGAGGTAGATGTCCA  1844

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1845  TTTTCGGATGATCCATGAGGATACCCGGCATCTGCTCTGCCCTTATTGCCTGAAGGTCTTCAAAAATGGCAATG  1918

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1919  CATTCCAACAGCATTACATGAGGCACCAGAAGAGAAATGTTTATCACTGCAACAAATGCCGGCTGCAGTTTCTC  1992

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1993  TTTGCCAAGGACAAAATTGAACACAAGCTTCAACACCATAAAACCTTCCGTAAACCCAAGCAGCTGGAGGGCTT  2066

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2067  GAAACCAGGCACCAAGGTGACAATCCGGGCTTCCCGAGGGCAGCCACGAACTGTTCCTGTATCCTCTAATGATA  2140

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2141  CACCTCCCAGCGCCTTGCAGGAGGCAGCACCGCTGACCTCCTCAATGGACCCTCTGCCTGTCTTCCTTTATCCC  2214

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2215  CCTGTCCAGCGCAGCATCCAGAAGAGAGCTGTTAGGAAAATGAGTGTCATGGGCCGGCAGACATGCCTGGAGTG  2288

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2289  CAGCTTCGAGATCCCAGACTTCCCTAATCATTTCCCTACTTACGTACACTGCTCTCTGTGTCGCTATAGCACCT  2362

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2363  GCTGTTCTCGAGCTTATGCCAACCACATGATCAACAATCATGTTCCACGGAAGAGCCCCAAGTATTTGGCTTTG  2436

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2437  TTTAAAAATTCTGTGAGTGGAATCAAGCTGGCCTGCACTTCATGTACCTTTGTTACCTCTGTGGGCGATGCTAT  2510

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2511  GGCCAAGCATTTGGTATTCAACCCCTCTCACAGATCCAGCAGCATCCTGCCACGGGGACTCACTTGGATAGCTC  2584

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2585  ACTCAAGGCATGGCCAGACTCGTGACCGAGTGCATGACCGGAACGTGAAGAATATGTACCCTCCTCCTTCCTTC  2658

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2659  CCCACTAACAAAGCTGCCACTGTGAAATCTGCGGGGGCCACCCCAGCTGAGCCTGAAGAGCTACTAACTCCCTT  2732

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2733  AGCCCCAGCACTCCCATCACCAGCCTCAACTGCAACCCCACCACCAACCCCCACTCACCCGCAGGCTTTAGCCC  2806

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2807  TTCCACCGCTGGCTACAGAGGGAGCCGAATGTCTGAATGTTGATGATCAGGATGAAGGGAGCCCAGTCACCCAA  2880

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2881  GAACCTGAGCTAGCATCAGGTGGTGGTGGTAGTGGTGGAGTTGGCAAAAAGGAGCAGCTGTCTGTGAAGAAGCT  2954

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2955  TCGAGTAGTACTGTTTGCTCTATGCTGCAATACAGAACAGGCAGCTGAACACTTCCGAAATCCCCAGCGACGTA  3028

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3029  TTCGCCGTTGGCTTCGACGTTTCCAGGCCTCCCAGGGGGAGAATCTAGAGGGCAAATATCTGAGCTTTGAGGCA  3102

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3103  GAAGAGAAACTGGCTGAGTGGGTGCTAACCCAGCGCGAACAACAGCTACCTGTAAATGAGGAGACCTTGTTCCA  3176

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3177  GAAGGCCACCAAAATAGGACGTTCTTTGGAAGGGGGGTTTAAGATCTCCTATGAGTGGGCTGTGCGTTTCATGC  3250

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3251  TGCGGCACCACCTGACTCCCCATGCCCGGCGAGCTGTGGCCCACACCCTACCTAAGGATGTAGCAGAGAATGCA  3324

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3325  GGACTCTTCATTGATTTTGTACAACGGCAGATTCACAACCAGGACTTACCCTTGTCTATGATTGTGGCTATTGA  3398

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3399  TGAGATCTCTTTGTTCCTGGATACAGAGGTGCTGAGCAGTGATGATCGAAAGGAGAATGCCCTGCAGACAGTGG  3472

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3473  GCACAGGGGAACCTTGGTGTGATGTAGTCCTAGCCATTCTGGCAGATGGCACTGTCCTTCCCACCCTGGTTTTC  3546

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3547  TACAGAGGGCAGATGGATCAGCCTGCTAACATGCCAGACTCCATATTGCTAGAGGCAAAGGAGAGTGGCTACAG  3620

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3621  TGATGACGAGATCATGGAGCTGTGGTCAACTCGAGTGTGGCAGAAGCACACAGCTTGCCAGCGCAGCAAAGGCA  3694

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3695  TGCTTGTGATGGACTGTCATCGCACTCACTTGTCAGAAGAGGTACTGGCTATGCTTAGTGCCTCTAGCACTTTG  3768

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3769  CCTGCAGTGGTCCCAGCAGGCTGTAGCTCCAAAATTCAGCCATTAGATGTATGCATCAAAAGAACTGTCAAGAA  3842

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3843  CTTCCTGCATAAAAAATGGAAGGAACAGGCTCGGGAAATGGCAGATACTGCATGTGATTCTGATGTCCTGCTTC  3916

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3917  AGCTGGTGCTTGTCTGGCTGGGTGAAGTGCTAGGTGTCATTGGGGACTGTCCAGAGCTAGTTCAGCGCTCCTTC  3990

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 3991  CTGGTGGCTAGTGTTCTGCCTGGCCCCGATGGCAACATTAACTCACCTACAAGAAATGCTGACATGCAGGAGGA  4064

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 4065  GCTAATTGCCTCCCTAGAGGAGCAACTGAAGCTGAGTGGGGAACATTCTGAGTCTTCCACTCCACGACCCAGAT  4138

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 4139  CATCTCCTGAAGAGACAATTGAGCCTGAAAGTCTTCACCAGCTCTTTGAGGGTGAAAGTGAGACCGAGTCTTTC  4212

Query 1090  ---------------------------------------  1089
                                                   
Sbjct 4213  TATGGCTTTGAAGAAGCTGACCTAGATCTGATGGAGATT  4251

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