Nucleotide Global Alignment

Description

• Query: TRCN0000467809
• Subject: XM_006504628.3
• Aligned Length: 1692
• Identities: 1257
• Gaps: 231

Alignment

Query    1  ATGATGACTGCTGAATCACGGGAAGCCACGGGTCTGTCCCCACAGGCTGCACAGGAGAAGGATGGTATCGTAAT  74
            ||||||||||||||.|||.|||||.||||.|||||.|||||||||||||||||||||||.||||||||.||.||
Sbjct    1  ATGATGACTGCTGAGTCAAGGGAAACCACAGGTCTATCCCCACAGGCTGCACAGGAGAAAGATGGTATAGTTAT  74

Query   75  AGCGAAGGTGGAAGAGGAAGATGAGGAAGACCACATGTGGGGGCAGGATTCCACCCTACAGGACACGCCTCCTC  148
            .|.||||||.|||||.||||||||.|||||||||||||||||||||||.||.|.|||.|||||.||.||.||.|
Sbjct   75  TGTGAAGGTAGAAGAAGAAGATGAAGAAGACCACATGTGGGGGCAGGACTCTAGCCTGCAGGAGACACCACCAC  148

Query  149  CAGACCCAGAGATATTCCGCCAACGCTTCAGGCGCTTCTGTTACCAGAACACTTTTGGGCCCCGAGAGGCTCTC  222
            |.|||||||||.|||||||||||||.|||||||||||||||||||||||||||||||||||.|||||.|||.|.
Sbjct  149  CCGACCCAGAGGTATTCCGCCAACGGTTCAGGCGCTTCTGTTACCAGAACACTTTTGGGCCTCGAGAAGCTTTG  222

Query  223  AGTCGGCTGAAGGAACTTTGTCATCAGTGGCTGCGGCCAGAAATAAACACCAAGGAACAGATCCTGGAGCTTCT  296
            |.|||.||.|||||||||||||||||||||||.||.||||||.|.||||.|||||||||||||.|||||||..|
Sbjct  223  AATCGACTAAAGGAACTTTGTCATCAGTGGCTCCGACCAGAAGTCAACAGCAAGGAACAGATCTTGGAGCTGTT  296

Query  297  GGTGCTAGAGCAGTTTCTTTCCATCCTGCCCAAGGAGCTCCAGGTCTGGCTGCAGGAATACCGCCCCGATAGTG  370
            |||.||.||||||||.||.||||||||||||||.|||||.||.||||||||||||||.|||||.||.||.||||
Sbjct  297  GGTACTGGAGCAGTTCCTGTCCATCCTGCCCAAAGAGCTGCAAGTCTGGCTGCAGGAGTACCGGCCTGACAGTG  370

Query  371  GAGAGGAGGCCGTGACCCTTCTAGAAGACTTGGAGCTTGATTTATCAGGACAACAGGTCCCAGGTCAAGTTCAT  444
            |.||.|||||||||||.|||||||||||||||||.||||||.||||.|||||.|||||||||||||||||||||
Sbjct  371  GGGAAGAGGCCGTGACTCTTCTAGAAGACTTGGAACTTGATCTATCGGGACAGCAGGTCCCAGGTCAAGTTCAT  444

Query  445  GGACCTGAGATGCTCGCAAGGGGGATGGTGCCTCTGGATCCAGTTCAGGAGTCCTCGAGCTTTGACCTTCATCA  518
            ||.|||||||||||.||.|||||..|||||||||||||||||||||||||||||||.|||||||||   |||||
Sbjct  445  GGGCCTGAGATGCTTGCCAGGGGTGTGGTGCCTCTGGATCCAGTTCAGGAGTCCTCAAGCTTTGAC---CATCA  515

Query  519  CGAGGCCACCCAGTCCCACTTCAAACATTCGTCTCGGAAACCCCGCCTCTTACAGTCACGAGCTCTTCCTGCTG  592
            .||..|..|||||||.||.|||||.|||||.|||.||||.||.||.||||||   ||.|||             
Sbjct  516  TGAAACTGCCCAGTCTCATTTCAAGCATTCATCTAGGAAGCCTCGTCTCTTA---TCCCGA-------------  573

Query  593  CCCACATTCCTGCACCCCCTCATGAGGGTAGTCCCAGAGACCAGGCGATGGCATCTGCACTATTCACAGCGGAT  666
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query  667  TCCCAGGCAATGGTGAAGATCGAGGACATGGCTGTGTCCCTCATTCTGGAGGAATGGGGATGTCAGAATCTGGC  740
                                                                                   |||
Sbjct  574  -----------------------------------------------------------------------GGC  576

Query  741  TCGGAGGAATCTCAGTAGGGACAACAGGCAGGAGAATTATGGGAGCGCATTTCCCCAGGGTGGTGAAAACAGGA  814
            ||                                                             |||.|||||||
Sbjct  577  TC-------------------------------------------------------------TGAGAACAGGA  589

Query  815  ATGAGAACGAGGAGTCAACCTCAAAGGCTGAAACCTCGGAAGATTCAGCATCACGCGGGGAGACAACAGGAAGA  888
            |||.||   |.|||||||||||||||||||||..|...||||||||..|.||||..|||||||.|.||||.|||
Sbjct  590  ATGGGA---ATGAGTCAACCTCAAAGGCTGAAGTCAAAGAAGATTCCACCTCACATGGGGAGATAGCAGGGAGA  660

Query  889  TCCCAGAAAGAGTTTGGAGAGAAACGTGACCAGGAGGGCAAAACAGGAGAAAGACAGCAGAAAAACCCTGAGGA  962
            |.||||||.||.||||||||||||||.||.|||.||||||.|..||..|||||.||.||||||||.|||||.||
Sbjct  661  TTCCAGAAGGAATTTGGAGAGAAACGGGAACAGCAGGGCAGAGTAGTCGAAAGGCAACAGAAAAATCCTGAAGA  734

Query  963  GAAAACCAGGAAAGAGAAAAGAGATTCAGGGCCAGCTATAGGAAAGGACAAAAAAACCATCACAGGAGAGAGAG  1036
            ||||||..|.|||||.||.|.|||..|.||||||.|||.||..|||||.|||||..|||.||||||||||.|.|
Sbjct  735  GAAAACTGGCAAAGAAAAGAAAGAGCCTGGGCCACCTACAGCCAAGGAAAAAAAGCCCAGCACAGGAGAGCGGG  808

Query 1037  GTCCAAGGGAGAAGGGGAAAGGATTGGGAAGAAGCTTCAGTCTGAGCTCCAACTT---CACCACCCCTGAAGAA  1107
            |.||..||||||||||.|||||..||||.||||||||.||.||||||.|.|||||   .|.||||||.||.||.
Sbjct  809  GCCCGCGGGAGAAGGGTAAAGGTCTGGGGAGAAGCTTTAGCCTGAGCGCAAACTTTAATAACACCCCAGAGGAG  882

Query 1108  GTTCCCACGGGAACAAAGTCTCACAGATGTGATGAATGTGGTAAATGCTTCACGAGAAGTTCAAGCCTTATCCG  1181
            |.|||..|||||.|||||.||||||||||.|||||.|||||.|||||.|||||.|||||.||||||||||||||
Sbjct  883  GCTCCGTCGGGAGCAAAGACTCACAGATGCGATGAGTGTGGGAAATGTTTCACAAGAAGCTCAAGCCTTATCCG  956

Query 1182  CCATAAAATAATCCACACTGGAGAAAAGCCCTATGAATGTAGTGAGTGTGGGAAAGCCTTCAGTCTTAACTCCA  1255
            |||||||||.||||||||||||||.||.|||||.|||||||..||||||||.||||||||||||||.||.||.|
Sbjct  957  CCATAAAATCATCCACACTGGAGAGAAACCCTACGAATGTAACGAGTGTGGCAAAGCCTTCAGTCTCAATTCAA  1030

Query 1256  ACCTTGTCCTGCATCAGAGGATCCACACAGGAGAGAAACCTCATGAATGTAACGAGTGTGGCAAGGCCTTCAGC  1329
            ||||||||||.||||||.|.||||||||.|||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1031  ACCTTGTCCTTCATCAGCGAATCCACACGGGAGAGAAACCTCATGAATGTAACGAGTGTGGCAAAGCCTTCAGC  1104

Query 1330  CACAGTTCCAATCTCATCCTCCATCAGCGCATCCACTCTGGAGAGAAACCTTATGAATGTAATGAGTGCGGGAA  1403
            ||.||.||.|||||||||||.||.|||||||||||||||||||||||.||.|||||||||||.|||||.||.||
Sbjct 1105  CATAGCTCAAATCTCATCCTGCACCAGCGCATCCACTCTGGAGAGAAGCCCTATGAATGTAACGAGTGTGGCAA  1178

Query 1404  GGCCTTCAGCCAGAGCTCGGACCTCACCAAGCATCAGAGAATTCACACGGGGGAGAAACCCTATGAATGTAGTG  1477
            .|||||||||||||||||.||||||||.|||||.||||||||.||.||.||.|||||.||||||||||||||.|
Sbjct 1179  AGCCTTCAGCCAGAGCTCAGACCTCACGAAGCACCAGAGAATCCATACAGGAGAGAAGCCCTATGAATGTAGCG  1252

Query 1478  AATGTGGAAAAGCTTTCAACCGAAACTCATACCTGATTTTGCATCGGAGAATTCACACTCGAGAAAAGCCCTAC  1551
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||
Sbjct 1253  AATGTGGAAAAGCTTTCAACCGAAACTCATACCTTATTTTGCATCGGAGAATTCACACCCGAGAAAAGCCCTAC  1326

Query 1552  AAGTGCACTAAGTGTGGCAAGGCCTTCACCCGCAGCTCCACCCTCACTCTGCATCACAGAATCCATGCCAGAGA  1625
            ||||||||||||||||||||||||||||||||.|||||.||||||||.|||||.||||||||||||||||||||
Sbjct 1327  AAGTGCACTAAGTGTGGCAAGGCCTTCACCCGGAGCTCGACCCTCACACTGCACCACAGAATCCATGCCAGAGA  1400

Query 1626  GAGAGCCTCTGAGTACAGCCCAGCCTCCCTTGATGCATTTGGCGCGTTCCTGAAAAGTTGTGTG  1689
            ||||.|.||.||.||||||||||||||.||.|||||.|||||.||.||||||||||||||||||
Sbjct 1401  GAGAACGTCAGAATACAGCCCAGCCTCTCTGGATGCCTTTGGGGCATTCCTGAAAAGTTGTGTG  1464