Nucleotide Global Alignment
Description
- Query:
- TRCN0000467868
- Subject:
- NR_146738.1
- Aligned Length:
- 2447
- Identities:
- 1049
- Gaps:
- 1378
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA 74
Query 1 -ATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCC--------------------------------------- 34
||||||||||||||||||||||||||||||||||
Sbjct 75 CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGGTATGGATCCCGGAGCGCGCAGAGGAGTCCCTGAGGA 148
Query 35 -------------------------------------------------------------------------- 34
Sbjct 149 GCTAGGGACCCCAAAGGCCTTTCACCGCTGCGGGCCAGTCCTCAGTCAGCTGGAGGGTGGGTCCCACGGAATCC 222
Query 35 -------------------------------------------------------------------------- 34
Sbjct 223 TGTTAGTTTCTACCACCTCCTCCCCCTTCTCTGGAGCTGGTGGAGCTTCAGAAGTCCTGTGGAGCGTCGGCTGG 296
Query 35 ----------------------------------AGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 74
||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATCAGTTTGTCTCGGTGAAAAGTAAACTTTGAAAGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 370
Query 75 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 444
Query 149 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 518
Query 223 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 592
Query 297 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 666
Query 371 AGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACC 740
Query 445 ATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGA 814
Query 519 TTGGGGCATGCAGTTTGGTCT-------------------------TCTGGGAACTGGC--TTCCAGCTGTTTG 565
||||||||||||||||||||| .|.|.|||| | ||||..||||..|
Sbjct 815 TTGGGGCATGCAGTTTGGTCTAGAGACAAGATCGCTATGTAGACACACCGTGAAC---CATTTCCCACTGTGGG 885
Query 566 GCTATGAGGAAAAACTGCAG-----TCCAA-----TCCTCTACAG-----------CATCTC-------TTTGA 611
.|| |.|..||..||| |||.| |.||||.|.| |||||| ||..|
Sbjct 886 CCT-----GCACCACCCCAGGGGCTTCCTAGCTTCTGCTCTTCTGGAAGTCTTCCCCATCTCCTCCCCATTCCA 954
Query 612 AGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCACAGGAGTTCTTCCAAC 685
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 GGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCACAGGAGTTCTTCCAAC 1028
Query 686 GATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGCATTGAAGAGTACATT 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 GATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGCATTGAAGAGTACATT 1102
Query 760 CGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCAAGA 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1103 CGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCAAGA 1176
Query 834 GGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTGTAGTAGATCTCTCTG 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 GGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTGTAGTAGATCTCTCTG 1250
Query 908 GGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGATCTT 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 GGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGATCTT 1324
Query 982 GCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGT----GATAAAGGACAAAAAAA 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1325 GCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGACAGATAAAGGACAAAAAAA 1398
Query 1052 GCATTTTCAGCAAGTATTCCAAATGC------------------------------------------------ 1077
||||||||||||||||||||||||||
Sbjct 1399 GCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAAAGGTGCCAGCACGTGCCCT 1472
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1473 TTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGATGTTTTAAATGAGATTCAA 1546
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1547 TTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACCCACAAGAGACTGCAGAGAG 1620
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1621 GGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGACTACAAGTTCAGCTGGGATC 1694
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1695 GTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCGCCTCCACAGTTTGGAAGAG 1768
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1769 ACTTTTGGATGTGGGTACCTGAATGACTTCAACACTGCTTGTTTACAAGAGCCACAGTCTGTTTCAATTCTTCA 1842
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1843 GCATCTTCTCAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGACTTTCAACCCAGGCATATCGTCAGTTACC 1916
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1917 TTCTAACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACTACAAATAAAAGATAGTCCTCCTGAAGTGGCT 1990
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1991 GGGGCCAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCCAATGGAATGAAACTTCTTGGAATAACACC 2064
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2065 TATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGTGATGTTGGCTCACTGCAACCTCCACCTCCC 2138
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2139 AGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGTGCCATCACGCCAGGCTAA 2212
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2213 TTTTGTATTTTTAGTAGAGACAGGGTTTCTCTATGTTGGTCAGGCTGGTCTTGCACTCCCGACCTCAGGTTATC 2286
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2287 TGTCTGCCTTGGCCTCCCAAAGTGTTGGGATTAGAGGCATGAACCACCACGCCCAGCCAAAGTTAAACTATTAT 2360
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2361 TCTGTGTCAGAATCTGTATTAAATGTGACTTGTCAAGTTATTCAGTCTTTATCCTTAAATAAATGAGTTATCTG 2434
Query 1078 ----- 1077
Sbjct 2435 AATTC 2439
