Nucleotide Global Alignment
Description
- Query:
- TRCN0000467868
- Subject:
- NR_146741.1
- Aligned Length:
- 2445
- Identities:
- 915
- Gaps:
- 1516
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA 74
Query 1 -ATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAG------------------------------------- 36
||||||||||||||||||||||||||||||||||||
Sbjct 75 CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGGTATGGATCCCGGAGCGCGCAGAGGAGTCCCTGAGGA 148
Query 37 ------------------CTTT------------CCA---------------GAGTGT---------TGAATC- 55
|||| ||| |||.|| .|||||
Sbjct 149 GCTAGGGACCCCAAAGGCCTTTCACCGCTGCGGGCCAGTCCTCAGTCAGCTGGAGGGTGGGTCCCACGGAATCC 222
Query 56 -------TTCCACCAGAAAACTTGATCACATCAATATCTGCAG----------TTC------------------ 94
|||.||| ||.|..||.| |..|.||||.|| |||
Sbjct 223 TGTTAGTTTCTACC-----ACCTCCTCCC--CCTTCTCTGGAGCTGGTGGAGCTTCAGAAGTCCTGTGGAGCGT 289
Query 95 ----------CAATTTCCC------AA------------AAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGA 140
||.|||..| || |||| ||||||||||||||||||||||||||||||
Sbjct 290 CGGCTGGGATCAGTTTGTCTCGGTGAAAAGTAAACTTTGAAAG-AGAAGTAGCTGATTTTCAGCTTTCTGTGGA 362
Query 141 TTCTTTATTGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGC 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 TTCTTTATTGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGC 436
Query 215 TAAGATGTGATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTC 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 437 TAAGATGTGATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTC 510
Query 289 TTAACAAAGACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGG 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 511 TTAACAAAGACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGG 584
Query 363 ACTTCCCCAGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGC 436
||||||||||||||||||||||||||||||||
Sbjct 585 ACTTCCCCAGAAGAAGATTGTGGTTGAATTCA------------------------------------------ 616
Query 437 GTTCTACCATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTAC 510
Sbjct 617 -------------------------------------------------------------------------- 616
Query 511 CTTGGCGATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCA 584
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 617 ------------------------GGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCA 666
Query 585 GTCCAATCCTCTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAG 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTCCAATCCTCTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAG 740
Query 659 CAAAAGCAGCACAGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTT 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAAAAGCAGCACAGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTT 814
Query 733 CGGGACTTGAGCATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGA 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CGGGACTTGAGCATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGA 888
Query 807 ATCATTTTATCGTGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAA 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCATTTTATCGTGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAA 962
Query 881 AAGGAACGGCTGTAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGG 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAGGAACGGCTGTAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGG 1036
Query 955 ACTTCTCTCTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGAT 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACTTCTCTCTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGAT 1110
Query 1029 ATATGT----GATAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGC--------------------- 1077
|||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATATGTGACAGATAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACT 1184
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1185 GGGCAGAAAGGTGCCAGCACGTGCCCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTC 1258
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1259 CTGGAAGATGTTTTAAATGAGATTCAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACT 1332
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1333 CAAGAACCCACAAGAGACTGCAGAGAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCT 1406
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1407 TATCTGACTACAAGTTCAGCTGGGATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACA 1480
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1481 CACGCCCGCCTCCACAGTTTGGAAGAGACTTTTGGATGTGGGTACCTGAATGACTTCAACACTGCTTGTTTACA 1554
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1555 AGAGCCACAGTCTGTTTCAATTCTTCAGCATCTTCTCAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGACT 1628
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1629 TTCAACCCAGGCATATCGTCAGTTACCTTCTAACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACTACAA 1702
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1703 ATAAAAGATAGTCCTCCTGAAGTGGCTGGGGCCAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCCAA 1776
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1777 TGGAATGAAACTTCTTGGAATAACACCTGTATGTAGGATGTAATTTCCATTAAAATGGCTTTTAAAATGTCAAG 1850
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1851 TGAATTCTAGTTATCTATTCTGAGATGCCTTGCTGTTCAGAATAAATTTAAATTTTTTTTTTTTTTTTTTGAGA 1924
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1925 TGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGTGATGTTGGCTCACTGCAACCTCCACCTCCCAG 1998
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1999 GTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGTGCCATCACGCCAGGCTAATT 2072
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2073 TTGTATTTTTAGTAGAGACAGGGTTTCTCTATGTTGGTCAGGCTGGTCTTGCACTCCCGACCTCAGGTTATCTG 2146
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2147 TCTGCCTTGGCCTCCCAAAGTGTTGGGATTAGAGGCATGAACCACCACGCCCAGCCAAAGTTAAACTATTATTC 2220
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2221 TGTGTCAGAATCTGTATTAAATGTGACTTGTCAAGTTATTCAGTCTTTATCCTTAAATAAATGAGTTATCTGAA 2294
Query 1078 --- 1077
Sbjct 2295 TTC 2297
