Nucleotide Global Alignment
Description
- Query:
- TRCN0000467868
- Subject:
- NR_146752.1
- Aligned Length:
- 2631
- Identities:
- 1021
- Gaps:
- 1610
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA 74
Query 1 -ATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCC--------------------------------------- 34
||||||||||||||||||||||||||||||||||
Sbjct 75 CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGGTATGGATCCCGGAGCGCGCAGAGGAGTCCCTGAGGA 148
Query 35 -------------------------------------------------------------------------- 34
Sbjct 149 GCTAGGGACCCCAAAGGCCTTTCACCGCTGCGGGCCAGTCCTCAGTCAGCTGGAGGGTGGGTCCCACGGAATCC 222
Query 35 -------------------------------------------------------------------------- 34
Sbjct 223 TGTTAGTTTCTACCACCTCCTCCCCCTTCTCTGGAGCTGGTGGAGCTTCAGAAGTCCTGTGGAGCGTCGGCTGG 296
Query 35 ----------------------------------AGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 74
||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATCAGTTTGTCTCGGTGAAAAGTAAACTTTGAAAGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 370
Query 75 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 444
Query 149 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 518
Query 223 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 592
Query 297 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 666
Query 371 AGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACC 444
|||||||||||||||||||||||
Sbjct 667 AGAAGAAGATTGTGGTTGAATTC--------------------------------------------------- 689
Query 445 ATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGA 518
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 690 -----AGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGA 758
Query 519 TTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 759 TTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATC 832
Query 593 CTCTACAGCATCTCTTTGAA------------------------------------------------------ 612
||||||||||||||||||||
Sbjct 833 CTCTACAGCATCTCTTTGAAGTCTAGAGACAAGATCGCTATGTAGACACACCGTGAACCATTTCCCACTGTGGG 906
Query 613 ----------------------------------------------------------------------GTTT 616
||||
Sbjct 907 CCTGCACCACCCCAGGGGCTTCCTAGCTTCTGCTCTTCTGGAAGTCTTCCCCATCTCCTCCCCATTCCAGGTTT 980
Query 617 ATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCACAGGAGTTCTTCCAACGATTG 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 981 ATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCACAGGAGTTCTTCCAACGATTG 1054
Query 691 GAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGCATTGAAGAGTACATTCGGGT 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055 GAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGCATTGAAGAGTACATTCGGGT 1128
Query 765 TTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCAAGAGGTCT 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 TTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCAAGAGGTCT 1202
Query 839 TAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTGTAGTAGATCTCTCTGGGAAT 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 TAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTGTAGTAGATCTCTCTGGGAAT 1276
Query 913 GGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGATCTTGCAGC 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1277 GGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGATCTTGCAGC 1350
Query 987 TGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGATAAAGGACAAAAAAAGCATTTTCA 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1351 TGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGATAAAGGACAAAAAAAGCATTTTCA 1424
Query 1061 GCAAGTATTCCAAATGC--------------------------------------------------------- 1077
|||||||||||||||||
Sbjct 1425 GCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAAAGGTGCCAGCACGTGCCCTTTGGAGTAG 1498
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1499 TACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGATGTTTTAAATGAGATTCAATTAAGGATG 1572
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1573 CTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACCCACAAGAGACTGCAGAGAGGGTCGGGCT 1646
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1647 CGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGACTACAAGTTCAGCTGGGATCGTGTTTTCC 1720
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1721 AGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCGCCTCCACAGTTTGGAAGAGACTTTTGGA 1794
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1795 TGTGGGTACCTGAATGACTTCAACACTGCTTGTTTACAAGAGCCACAGTCTGTTTCAATTCTTCAGCATCTTCT 1868
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1869 CAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGACTTTCAACCCAGGCATATCGTCAGTTACCTTCTAACTT 1942
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1943 TAAGTCATCTTGCAGCTGTGGCACACAAAACACTACAAATAAAAGATAGTCCTCCTGAAGTGGCTGGGGCCAGA 2016
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2017 CTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCCAATGGAATGAAACTTCTTGGAATAACACCTGTATGTAG 2090
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2091 GATGTAATTTCCATTAAAATGGCTTTTAAAATGTCAAGTGAATTCTAGTTATCTATTCTGAGATGCCTTGCTGT 2164
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2165 TCAGAATAAATTTAAATTTTTTTTTTTTTTTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAA 2238
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2239 TGGTGTGATGTTGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAG 2312
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2313 CTGGGATTACAGGCACGTGCCATCACGCCAGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCTCTATGTTG 2386
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2387 GTCAGGCTGGTCTTGCACTCCCGACCTCAGGTTATCTGTCTGCCTTGGCCTCCCAAAGTGTTGGGATTAGAGGC 2460
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2461 ATGAACCACCACGCCCAGCCAAAGTTAAACTATTATTCTGTGTCAGAATCTGTATTAAATGTGACTTGTCAAGT 2534
Query 1078 ----------------------------------------- 1077
Sbjct 2535 TATTCAGTCTTTATCCTTAAATAAATGAGTTATCTGAATTC 2575
