Nucleotide Global Alignment
Description
- Query:
- TRCN0000468031
- Subject:
- NM_001204492.1
- Aligned Length:
- 1638
- Identities:
- 1182
- Gaps:
- 208
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
|||||||||||.|..|||||||||||.|||||||||||.||||||||||.||||||..||||||||||.|||||
Sbjct 1 ATGGCCACCACCGCCACCTGCACCCGTTTCACCGACGACTACCAGCTCTTCGAGGAGCTTGGCAAGGGTGCTTT 74
Query 75 CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA 143
||||||||||||..|.|||||.||| ||| ||| .||.|||||.|||||.||.||||||||.|||||
Sbjct 75 CTCTGTGGTCCGCAGGTGTGTGAAGAAAACCTC--CAC---GCAGGAGTACGCAGCAAAAATCATCAATACCAA 143
Query 144 GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA 217
||||.||||.|||.|.|||||||||||.||.||..|.|||||||||||.||.||.||||||||.|||.|.||||
Sbjct 144 GAAGTTGTCTGCCCGGGATCACCAGAAACTAGAACGTGAGGCTCGGATATGTCGACTTCTGAAACATCCAAACA 217
Query 218 TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG 291
|||||||.|||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct 218 TCGTGCGCCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGCGGGGAG 291
Query 292 CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA 365
||.|||||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.|||||
Sbjct 292 CTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGA 365
Query 366 GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC 438
|...|||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.
Sbjct 366 GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGT 438
Query 439 AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG 512
||.|||||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.||
Sbjct 439 AAATGCAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG 512
Query 513 GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG 586
|||||||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct 513 GTTTGGTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG 586
Query 587 ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC 660
|.||||||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.||||||
Sbjct 587 ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCAC 660
Query 661 AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC 734
||||||||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.|||||||||||
Sbjct 661 AAGCTGTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGC 734
Query 735 CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC 808
|||.|||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.|||||||
Sbjct 735 CAAGAACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACC 808
Query 809 CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC 882
||||||||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...||||||
Sbjct 809 CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTC 882
Query 883 AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC------------ 944
||||||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.|||||
Sbjct 883 AATGCCCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCAGTTGGCAGGCA 956
Query 945 ---------------------------------------------------AGCAGCCAAGAGTTTACTCAACA 967
|||.|||||.||..||.|.||||
Sbjct 957 GAGCTCCGCCCCCGCCTCGCCTGCCGCGAGCGCCGCCGGCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGAACA 1030
Query 968 AGAAAGCAGAT---GGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGC-----AGCCGCCACCAGCCCCA 1033
||||..|.||| ||.||||||||.||||..|| ||.|||||||||| | ||| |||||||
Sbjct 1031 AGAAGTCGGATGGCGGTGTCAAGCCACAGAGCAA---CAACAAAAACAGT-CTCGTAAGC-----CCAGCCC-- 1093
Query 1034 AAG-GGACGCTTCCTCCTG----CCGCCCTGGAG---------------------------------------- 1062
||| |..|||..||| || |.|||.|||||
Sbjct 1094 AAGAGCCCGCGCCCT--TGCAGACGGCCATGGAGCCACAAACCACTGTGGTACACAACGCTACAGATGGGATCA 1165
Query 1063 -----TCTTCTGACAG-TGCCAATACCACCATAGAGGATGAAGACGCT-AAAGCCCGGAAGCAGGAGATCATTA 1129
||..|.||.|| || |||.|||||||.|||.|||||.||| || ||||..||.||.|||||||||||||
Sbjct 1166 AGGGCTCCACAGAGAGCTG-CAACACCACCACAGAAGATGAGGAC-CTCAAAGTGCGAAAACAGGAGATCATTA 1237
Query 1130 AGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGG 1203
|||..||.||.|||||.||.||.|||.|||||||.||.|||||||||||||||.||||.||.|||||.|||||.
Sbjct 1238 AGATTACAGAACAGCTGATTGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGATCCAGGC 1311
Query 1204 CTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAA 1277
||.||.||.|||||||||||.||.||.||.|||||.||.||.||||||||.|||||.|..||.|||||.|||||
Sbjct 1312 CTCACTTCCTTTGAGCCTGAGGCCCTTGGTAACCTCGTGGAGGGGATGGATTTCCATAAGTTTTACTTTGAGAA 1385
Query 1278 CCTGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATG 1351
.||.|||.||||||||||||||||.|||||.||.||||||||.|||||||||||.|||||.|||||.|||||.|
Sbjct 1386 TCTCCTGTCCAAGAACAGCAAGCCTATCCATACCACCATCCTAAACCCACACGTCCACGTGATTGGGGAGGACG 1459
Query 1352 CCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAG 1425
|.||.||||||||.||||||||.|||||.||||||||.|||||||||||.|||||.||||||||||||||.||.
Sbjct 1460 CAGCGTGCATCGCCTACATCCGCCTCACCCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGCCAGTCAGAA 1533
Query 1426 GAGACCCGCGTGTGGCCCCG---------------------------------CTG--CAG------------- 1451
||||||||.||.||||.||| ||| |||
Sbjct 1534 GAGACCCGGGTCTGGCACCGTCGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGC 1607
Query 1452 ---------- 1451
Sbjct 1608 ACCGCTGCAG 1617