Nucleotide Global Alignment

Description

• Query: TRCN0000468031
• Subject: NM_001367530.1
• Aligned Length: 1541
• Identities: 1169
• Gaps: 113

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
            |||||||||||.|..|||||||||||.|||||||||||.||||||||||.||||||..||||||||||.|||||
Sbjct    1  ATGGCCACCACCGCCACCTGCACCCGTTTCACCGACGACTACCAGCTCTTCGAGGAGCTTGGCAAGGGTGCTTT  74

Query   75  CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA  143
            ||||||||||||..|.|||||.|||     |||  |||   .||.|||||.|||||.||.||||||||.|||||
Sbjct   75  CTCTGTGGTCCGCAGGTGTGTGAAGAAAACCTC--CAC---GCAGGAGTACGCAGCAAAAATCATCAATACCAA  143

Query  144  GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA  217
            ||||.||||.|||.|.|||||||||||.||.||..|.|||||||||||.||.||.||||||||.|||.|.||||
Sbjct  144  GAAGTTGTCTGCCCGGGATCACCAGAAACTAGAACGTGAGGCTCGGATATGTCGACTTCTGAAACATCCAAACA  217

Query  218  TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG  291
            |||||||.|||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct  218  TCGTGCGCCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGCGGGGAG  291

Query  292  CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA  365
            ||.|||||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.|||||
Sbjct  292  CTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGA  365

Query  366  GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC  438
            |...|||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.
Sbjct  366  GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGT  438

Query  439  AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG  512
            ||.|||||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.||
Sbjct  439  AAATGCAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG  512

Query  513  GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG  586
            |||||||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct  513  GTTTGGTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG  586

Query  587  ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC  660
            |.||||||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.||||||
Sbjct  587  ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCAC  660

Query  661  AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC  734
            ||||||||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.|||||||||||
Sbjct  661  AAGCTGTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGC  734

Query  735  CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC  808
            |||.|||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.|||||||
Sbjct  735  CAAGAACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACC  808

Query  809  CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC  882
            ||||||||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...||||||
Sbjct  809  CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTC  882

Query  883  AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAG  956
            ||||||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||||||||.|||||.||
Sbjct  883  AATGCCCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCAGCTGCCAAAAG  956

Query  957  TTTACTCAACAAGAAAGCAGATGG-----------------AGTCAAGCCCCAGACGAATAGCACCAAAAACAG  1013
            ..||.|.||||||||..|.|||||                 ||||.||..|||| ||   .|||||.||     
Sbjct  957  CCTATTGAACAAGAAGTCGGATGGCGGTGTCAAGAAAAGGAAGTCGAGTTCCAG-CG---TGCACCTAA-----  1021

Query 1014  TGCAGCCGCCACCAGCCCCAAAGGGACGCTTC-CTCCTGCCGCCCTGGA-----GTCTTCTGACAGTGC--CAA  1079
            ||.|   |||||.|.||.|...||.||.|..| ||.|.|..|    |||     |.||.|..|.||.||  |||
Sbjct 1022  TGGA---GCCACAAACCACTGTGGTACACAACGCTACAGATG----GGATCAAGGGCTCCACAGAGAGCTGCAA  1088

Query 1080  TACCACCATAGAGGATGAAGACGCT-AAAGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAG  1152
            .|||||||.|||.|||||.||| || ||||..||.||.||||||||||||||||..||.||.|||||.||.||.
Sbjct 1089  CACCACCACAGAAGATGAGGAC-CTCAAAGTGCGAAAACAGGAGATCATTAAGATTACAGAACAGCTGATTGAA  1161

Query 1153  GCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGC  1226
            |||.|||||||.||.|||||||||||||||.||||.||.|||||.|||||.||.||.||.|||||||||||.||
Sbjct 1162  GCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTGAGGC  1235

Query 1227  ACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAGC  1300
            .||.||.|||||.||.||.||||||||.|||||.|..||.|||||.|||||.||.|||.|||||||||||||||
Sbjct 1236  CCTTGGTAACCTCGTGGAGGGGATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGC  1309

Query 1301  CGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGG  1374
            |.|||||.||.||||||||.|||||||||||.|||||.|||||.|||||.||.||.||||||||.||||||||.
Sbjct 1310  CTATCCATACCACCATCCTAAACCCACACGTCCACGTGATTGGGGAGGACGCAGCGTGCATCGCCTACATCCGC  1383

Query 1375  CTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCCCCG---  1445
            |||||.||||||||.|||||||||||.|||||.||||||||||||||.||.||||||||.||.||||.|||   
Sbjct 1384  CTCACCCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCGGGTCTGGCACCGTCG  1457

Query 1446  ------------------------------CTG--CAG-----------------------  1451
                                          |||  |||                       
Sbjct 1458  GGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTGCAG  1518